RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 TPRXLQ17RH7 258 aa5.43□□□□□ -1.54
CBX5-202ENST00000439541 SPTSSBQ8NFR3 76 aa5.43□□□□□ -1.54
CBX5-202ENST00000439541 LRP2P98164 4655 aa5.43□□□□□ -1.54
CBX5-202ENST00000439541 XP32Q5T750 250 aa5.42□□□□□ -1.54
CBX5-202ENST00000439541 A8MU10 97 aa5.41□□□□□ -1.54
CBX5-202ENST00000439541 IGKV2-30P06310 120 aa5.41□□□□□ -1.54
CBX5-202ENST00000439541 KTN1-AS1Q86SY8 53 aa5.39□□□□□ -1.55
CBX5-202ENST00000439541 C20orf166-AS1Q96NR2 134 aa5.39□□□□□ -1.55
CBX5-202ENST00000439541 SEC61GP60059 68 aa5.38□□□□□ -1.55
CBX5-202ENST00000439541 A8MUU9 505 aa5.37□□□□□ -1.55
CBX5-202ENST00000439541 A6NN06 94 aa5.37□□□□□ -1.55
CBX5-202ENST00000439541 SPINK7P58062 85 aa5.37□□□□□ -1.55
CBX5-202ENST00000439541 RPL37P61927 97 aaKnown RBP5.35□□□□□ -1.55
CBX5-202ENST00000439541 A0A1B0GU69 56 aa5.34□□□□□ -1.55
CBX5-202ENST00000439541 C7orf65Q6ZTY9 151 aa5.31□□□□□ -1.56
CBX5-202ENST00000439541 IGKV2D-30A0A075B6S6 120 aa5.3□□□□□ -1.56
CBX5-202ENST00000439541 MUC17Q685J3 4493 aa5.3□□□□□ -1.56
CBX5-202ENST00000439541 UBR4Q5T4S7 5183 aa5.29□□□□□ -1.56
CBX5-202ENST00000439541 UQCR11O14957 56 aa5.27□□□□□ -1.57
CBX5-202ENST00000439541 SPATA8Q6RVD6 105 aa5.27□□□□□ -1.57
CBX5-202ENST00000439541 MIR22HGQ0VDD5 57 aa5.23□□□□□ -1.57
CBX5-202ENST00000439541 SEC61BP60468 96 aaKnown RBP5.23□□□□□ -1.57
CBX5-202ENST00000439541 KRTAP4-1Q9BYQ7 146 aa5.22□□□□□ -1.57
CBX5-202ENST00000439541 RBM12B-AS1Q9P1G2 102 aa5.22□□□□□ -1.57
CBX5-202ENST00000439541 MUC2Q02817 5179 aa5.21□□□□□ -1.58
CBX5-202ENST00000439541 LOC100996750A0A140TA64 210 aa5.2□□□□□ -1.58
CBX5-202ENST00000439541 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
CBX5-202ENST00000439541 RNF213Q63HN8 5207 aa5.18□□□□□ -1.58
CBX5-202ENST00000439541 PRAC1Q96KF2 57 aa5.04□□□□□ -1.6
CBX5-202ENST00000439541 FAT4Q6V0I7 4981 aa5.04□□□□□ -1.6
CBX5-202ENST00000439541 KRTAP3-1Q9BYR8 98 aa5.04□□□□□ -1.6
CBX5-202ENST00000439541 A0A1B0GU33 70 aa5.03□□□□□ -1.6
CBX5-202ENST00000439541 KRTAP19-2Q3LHN2 52 aa5.02□□□□□ -1.61
CBX5-202ENST00000439541 COX6B2Q6YFQ2 88 aa5.02□□□□□ -1.61
CBX5-202ENST00000439541 ADM2Q7Z4H4 148 aa5.02□□□□□ -1.61
CBX5-202ENST00000439541 H0YAA0 97 aa5□□□□□ -1.61
CBX5-202ENST00000439541 H1FX-AS1Q4G0G2 97 aa5□□□□□ -1.61
CBX5-202ENST00000439541 LINC01554Q52M75 96 aa5□□□□□ -1.61
CBX5-202ENST00000439541 K7ERS5 55 aa4.96□□□□□ -1.62
CBX5-202ENST00000439541 CSAG1Q6PB30 78 aa4.95□□□□□ -1.62
CBX5-202ENST00000439541 FLGP20930 4061 aaPredicted RBP4.93□□□□□ -1.62
CBX5-202ENST00000439541 S4R3F8 94 aa4.9□□□□□ -1.63
CBX5-202ENST00000439541 MT1HP80294 61 aa4.88□□□□□ -1.63
CBX5-202ENST00000439541 KRTAP25-1Q3LHN0 102 aa4.85□□□□□ -1.63
CBX5-202ENST00000439541 KRTAP10-6P60371 365 aaPredicted RBP4.81□□□□□ -1.64
CBX5-202ENST00000439541 M0R2T5 61 aa4.8□□□□□ -1.64
CBX5-202ENST00000439541 ROMO1P60602 79 aa4.79□□□□□ -1.64
CBX5-202ENST00000439541 KRTAP23-1A1A580 65 aa4.76□□□□□ -1.65
CBX5-202ENST00000439541 KRTAP13-4Q3LI77 160 aa4.72□□□□□ -1.65
CBX5-202ENST00000439541 A0A0D9SG42 100 aa4.71□□□□□ -1.66
CBX5-202ENST00000439541 P0C880 135 aa4.69□□□□□ -1.66
CBX5-202ENST00000439541 M0QZ58 72 aa4.67□□□□□ -1.66
CBX5-202ENST00000439541 KRTAP19-4Q3LI73 84 aa4.66□□□□□ -1.66
CBX5-202ENST00000439541 KRTAP9-8Q9BYQ0 159 aa4.66□□□□□ -1.66
CBX5-202ENST00000439541 MT2AP02795 61 aa4.65□□□□□ -1.66
CBX5-202ENST00000439541 CRIPTQ9P021 101 aa4.65□□□□□ -1.67
CBX5-202ENST00000439541 MT1FP04733 61 aa4.64□□□□□ -1.67
CBX5-202ENST00000439541 KRTAP12-2P59991 146 aa4.6□□□□□ -1.67
CBX5-202ENST00000439541 KRTAP12-1P59990 96 aa4.59□□□□□ -1.67
CBX5-202ENST00000439541 KRTAP10-10P60014 251 aa4.59□□□□□ -1.67
CBX5-202ENST00000439541 SPINT4Q6UDR6 99 aa4.58□□□□□ -1.68
CBX5-202ENST00000439541 KRTAP4-8Q9BYQ9 185 aa4.5□□□□□ -1.69
CBX5-202ENST00000439541 C10orf95Q9H7T3 257 aa4.5□□□□□ -1.69
CBX5-202ENST00000439541 R4GN34 69 aa4.5□□□□□ -1.69
CBX5-202ENST00000439541 KRTAP9-3Q9BYQ3 159 aa4.49□□□□□ -1.69
CBX5-202ENST00000439541 KRTAP19-1Q8IUB9 90 aa4.49□□□□□ -1.69
CBX5-202ENST00000439541 SPRR2GQ9BYE4 73 aa4.45□□□□□ -1.7
CBX5-202ENST00000439541 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
CBX5-202ENST00000439541 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
CBX5-202ENST00000439541 KRTAP9-2Q9BYQ4 174 aa4.4□□□□□ -1.7
CBX5-202ENST00000439541 KRTAP9-6A0A140TA67 174 aa4.39□□□□□ -1.71
CBX5-202ENST00000439541 USH2AO75445 5202 aa4.39□□□□□ -1.71
CBX5-202ENST00000439541 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
CBX5-202ENST00000439541 KRTAP19-8Q3LI54 63 aa4.35□□□□□ -1.71
CBX5-202ENST00000439541 MT1BP07438 61 aa4.35□□□□□ -1.71
CBX5-202ENST00000439541 FSIP2Q5CZC0 6907 aa4.34□□□□□ -1.71
CBX5-202ENST00000439541 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
CBX5-202ENST00000439541 NDUFAF8A1L188 74 aa4.28□□□□□ -1.72
CBX5-202ENST00000439541 KRTAP4-12Q9BQ66 201 aa4.28□□□□□ -1.72
CBX5-202ENST00000439541 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
CBX5-202ENST00000439541 CAMK2N1Q7Z7J9 78 aa4.28□□□□□ -1.72
CBX5-202ENST00000439541 SSPOA2VEC9 5147 aa4.27□□□□□ -1.73
CBX5-202ENST00000439541 PLAC4Q8WY50 150 aa4.25□□□□□ -1.73
CBX5-202ENST00000439541 LCE3BQ5TA77 95 aa4.25□□□□□ -1.73
CBX5-202ENST00000439541 KRTAP9-7A8MTY7 169 aa4.19□□□□□ -1.74
CBX5-202ENST00000439541 KRTAP4-7Q9BYR0 210 aa4.18□□□□□ -1.74
CBX5-202ENST00000439541 MT1XP80297 61 aa4.18□□□□□ -1.74
CBX5-202ENST00000439541 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
CBX5-202ENST00000439541 KRTAP9-4Q9BYQ2 154 aa4.18□□□□□ -1.74
CBX5-202ENST00000439541 LCE4AQ5TA78 99 aa4.17□□□□□ -1.74
CBX5-202ENST00000439541 KRTAP10-5P60370 271 aa4.16□□□□□ -1.74
CBX5-202ENST00000439541 TNP1P09430 55 aa4.15□□□□□ -1.75
CBX5-202ENST00000439541 KRTAP19-6Q3LI70 58 aa4.14□□□□□ -1.75
CBX5-202ENST00000439541 LUZP6Q538Z0 58 aa4.11□□□□□ -1.75
CBX5-202ENST00000439541 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
CBX5-202ENST00000439541 FCGBPQ9Y6R7 5405 aaPredicted RBP4.09□□□□□ -1.76
CBX5-202ENST00000439541 PRO2289Q9P1D8 64 aa4.08□□□□□ -1.76
CBX5-202ENST00000439541 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
CBX5-202ENST00000439541 KRTAP10-7P60409 375 aaPredicted RBP4.02□□□□□ -1.77
CBX5-202ENST00000439541 MACF1Q9UPN3 7388 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms