RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 SNURFQ9Y675 71 aa5.46□□□□□ -1.54
HLA-DMB-259ENST00000438510 TRAV22A0A0B4J277 110 aa5.45□□□□□ -1.54
HLA-DMB-259ENST00000438510 C7orf65Q6ZTY9 151 aa5.45□□□□□ -1.54
HLA-DMB-259ENST00000438510 SPANXA2-OT1Q8N9U9 137 aa5.45□□□□□ -1.54
HLA-DMB-259ENST00000438510 IGKV2D-30A0A075B6S6 120 aa5.44□□□□□ -1.54
HLA-DMB-259ENST00000438510 IGKV2-30P06310 120 aa5.44□□□□□ -1.54
HLA-DMB-259ENST00000438510 CYP4F30PQ9H0H9 118 aa5.42□□□□□ -1.54
HLA-DMB-259ENST00000438510 H0Y9P7 68 aa5.41□□□□□ -1.54
HLA-DMB-259ENST00000438510 HRES1P13985 223 aa5.41□□□□□ -1.54
HLA-DMB-259ENST00000438510 RBM12B-AS1Q9P1G2 102 aa5.41□□□□□ -1.54
HLA-DMB-259ENST00000438510 LCE4AQ5TA78 99 aa5.4□□□□□ -1.54
HLA-DMB-259ENST00000438510 COX6B2Q6YFQ2 88 aa5.4□□□□□ -1.54
HLA-DMB-259ENST00000438510 SMIM26A0A096LP01 95 aa5.39□□□□□ -1.55
HLA-DMB-259ENST00000438510 LOC101927531A0A1B0GV80 90 aa5.39□□□□□ -1.55
HLA-DMB-259ENST00000438510 MPLKIPQ8TAP9 179 aa5.38□□□□□ -1.55
HLA-DMB-259ENST00000438510 LINC00208Q96KT6 92 aa5.38□□□□□ -1.55
HLA-DMB-259ENST00000438510 KRTAP4-11Q9BYQ6 195 aa5.38□□□□□ -1.55
HLA-DMB-259ENST00000438510 C1orf64Q8NEQ6 169 aa5.37□□□□□ -1.55
HLA-DMB-259ENST00000438510 KRTAP19-2Q3LHN2 52 aa5.36□□□□□ -1.55
HLA-DMB-259ENST00000438510 SVIPQ8NHG7 77 aa5.34□□□□□ -1.55
HLA-DMB-259ENST00000438510 FAT4Q6V0I7 4981 aa5.32□□□□□ -1.56
HLA-DMB-259ENST00000438510 C4orf26Q17RF5 130 aa5.3□□□□□ -1.56
HLA-DMB-259ENST00000438510 V9GYY9 64 aa5.29□□□□□ -1.56
HLA-DMB-259ENST00000438510 KRTAP9-7A8MTY7 169 aa5.27□□□□□ -1.57
HLA-DMB-259ENST00000438510 MT1HP80294 61 aa5.27□□□□□ -1.57
HLA-DMB-259ENST00000438510 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
HLA-DMB-259ENST00000438510 H1FX-AS1Q4G0G2 97 aa5.25□□□□□ -1.57
HLA-DMB-259ENST00000438510 FLGP20930 4061 aaPredicted RBP5.25□□□□□ -1.57
HLA-DMB-259ENST00000438510 M0R2T5 61 aa5.24□□□□□ -1.57
HLA-DMB-259ENST00000438510 Q1T7F1 81 aa5.24□□□□□ -1.57
HLA-DMB-259ENST00000438510 A8MUN3 132 aa5.2□□□□□ -1.58
HLA-DMB-259ENST00000438510 KRTAP3-1Q9BYR8 98 aa5.19□□□□□ -1.58
HLA-DMB-259ENST00000438510 ACYP2P14621 99 aa5.17□□□□□ -1.58
HLA-DMB-259ENST00000438510 COA5Q86WW8 74 aa5.16□□□□□ -1.58
HLA-DMB-259ENST00000438510 DMAC1Q96GE9 116 aa5.16□□□□□ -1.58
HLA-DMB-259ENST00000438510 S4R3F8 94 aa5.16□□□□□ -1.58
HLA-DMB-259ENST00000438510 KRTAP9-3Q9BYQ3 159 aa5.15□□□□□ -1.59
HLA-DMB-259ENST00000438510 KRTAP10-6P60371 365 aaPredicted RBP5.12□□□□□ -1.59
HLA-DMB-259ENST00000438510 LCA10Q71F78 164 aa5.1□□□□□ -1.59
HLA-DMB-259ENST00000438510 LINC01558Q9Y6Z2 57 aa5.09□□□□□ -1.59
HLA-DMB-259ENST00000438510 CSAG1Q6PB30 78 aa5.07□□□□□ -1.6
HLA-DMB-259ENST00000438510 PRO0628Q9UI54 55 aa5.07□□□□□ -1.6
HLA-DMB-259ENST00000438510 CRCT1Q9UGL9 99 aa5.06□□□□□ -1.6
HLA-DMB-259ENST00000438510 CHKB-CPT1BH3BT56 60 aa5.05□□□□□ -1.6
HLA-DMB-259ENST00000438510 SPTSSBQ8NFR3 76 aa5.04□□□□□ -1.6
HLA-DMB-259ENST00000438510 H3BS24 57 aa5.03□□□□□ -1.6
HLA-DMB-259ENST00000438510 PRR15LQ9BU68 103 aa5.02□□□□□ -1.61
HLA-DMB-259ENST00000438510 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
HLA-DMB-259ENST00000438510 MT2AP02795 61 aa4.99□□□□□ -1.61
HLA-DMB-259ENST00000438510 Q5VV11 94 aa4.99□□□□□ -1.61
HLA-DMB-259ENST00000438510 PSPHP1O15172 72 aa4.97□□□□□ -1.61
HLA-DMB-259ENST00000438510 BRK1Q8WUW1 75 aa4.96□□□□□ -1.62
HLA-DMB-259ENST00000438510 FSIP2Q5CZC0 6907 aa4.95□□□□□ -1.62
HLA-DMB-259ENST00000438510 KRTAP10-10P60014 251 aa4.95□□□□□ -1.62
HLA-DMB-259ENST00000438510 MT1FP04733 61 aa4.94□□□□□ -1.62
HLA-DMB-259ENST00000438510 H0YAA0 97 aa4.93□□□□□ -1.62
HLA-DMB-259ENST00000438510 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
HLA-DMB-259ENST00000438510 A0A1B0GU69 56 aa4.91□□□□□ -1.62
HLA-DMB-259ENST00000438510 CDC42SE1Q9NRR8 79 aa4.91□□□□□ -1.62
HLA-DMB-259ENST00000438510 A6NED7 52 aa4.9□□□□□ -1.63
HLA-DMB-259ENST00000438510 SEC61GP60059 68 aa4.9□□□□□ -1.63
HLA-DMB-259ENST00000438510 ADM2Q7Z4H4 148 aa4.87□□□□□ -1.63
HLA-DMB-259ENST00000438510 UQCR11O14957 56 aa4.85□□□□□ -1.63
HLA-DMB-259ENST00000438510 CRIPTQ9P021 101 aa4.84□□□□□ -1.63
HLA-DMB-259ENST00000438510 SPATA8Q6RVD6 105 aa4.81□□□□□ -1.64
HLA-DMB-259ENST00000438510 P0C880 135 aa4.78□□□□□ -1.64
HLA-DMB-259ENST00000438510 MIR22HGQ0VDD5 57 aa4.76□□□□□ -1.65
HLA-DMB-259ENST00000438510 SPRR2GQ9BYE4 73 aa4.76□□□□□ -1.65
HLA-DMB-259ENST00000438510 R4GN34 69 aa4.75□□□□□ -1.65
HLA-DMB-259ENST00000438510 PMAIP1Q13794 54 aa4.73□□□□□ -1.65
HLA-DMB-259ENST00000438510 A0A1B0GU33 70 aa4.71□□□□□ -1.66
HLA-DMB-259ENST00000438510 M0QZ58 72 aa4.71□□□□□ -1.66
HLA-DMB-259ENST00000438510 USH2AO75445 5202 aa4.68□□□□□ -1.66
HLA-DMB-259ENST00000438510 A6NN06 94 aa4.68□□□□□ -1.66
HLA-DMB-259ENST00000438510 KRTAP19-8Q3LI54 63 aa4.68□□□□□ -1.66
HLA-DMB-259ENST00000438510 KTN1-AS1Q86SY8 53 aa4.65□□□□□ -1.67
HLA-DMB-259ENST00000438510 A8MU10 97 aa4.64□□□□□ -1.67
HLA-DMB-259ENST00000438510 K7ERS5 55 aa4.62□□□□□ -1.67
HLA-DMB-259ENST00000438510 MT1BP07438 61 aa4.62□□□□□ -1.67
HLA-DMB-259ENST00000438510 LINC01554Q52M75 96 aa4.62□□□□□ -1.67
HLA-DMB-259ENST00000438510 SSPOA2VEC9 5147 aa4.61□□□□□ -1.67
HLA-DMB-259ENST00000438510 KRTAP13-4Q3LI77 160 aa4.58□□□□□ -1.68
HLA-DMB-259ENST00000438510 PLAC4Q8WY50 150 aa4.58□□□□□ -1.68
HLA-DMB-259ENST00000438510 KRTAP19-6Q3LI70 58 aa4.56□□□□□ -1.68
HLA-DMB-259ENST00000438510 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
HLA-DMB-259ENST00000438510 A0A0D9SG42 100 aa4.5□□□□□ -1.69
HLA-DMB-259ENST00000438510 KRTAP10-5P60370 271 aa4.47□□□□□ -1.69
HLA-DMB-259ENST00000438510 PRO2289Q9P1D8 64 aa4.47□□□□□ -1.69
HLA-DMB-259ENST00000438510 SPINT4Q6UDR6 99 aa4.42□□□□□ -1.7
HLA-DMB-259ENST00000438510 MACF1Q9UPN3 7388 aaKnown RBP4.42□□□□□ -1.7
HLA-DMB-259ENST00000438510 KRTAP12-1P59990 96 aa4.41□□□□□ -1.7
HLA-DMB-259ENST00000438510 MT1XP80297 61 aa4.41□□□□□ -1.7
HLA-DMB-259ENST00000438510 CAMK2N1Q7Z7J9 78 aa4.41□□□□□ -1.7
HLA-DMB-259ENST00000438510 KRTAP12-2P59991 146 aa4.38□□□□□ -1.71
HLA-DMB-259ENST00000438510 ROMO1P60602 79 aa4.38□□□□□ -1.71
HLA-DMB-259ENST00000438510 KRTAP6-3Q3LI67 103 aa4.37□□□□□ -1.71
HLA-DMB-259ENST00000438510 SYNE2Q8WXH0 6885 aaKnown RBP4.35□□□□□ -1.71
HLA-DMB-259ENST00000438510 KRTAP25-1Q3LHN0 102 aa4.28□□□□□ -1.72
HLA-DMB-259ENST00000438510 PRAC1Q96KF2 57 aa4.27□□□□□ -1.73
HLA-DMB-259ENST00000438510 KRTAP10-7P60409 375 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms