RNA–Protein interactions for RNA: ENST00000437966.3

CHRNA7-202, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 1,788 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-202ENST00000437966 LCA10Q71F78 164 aa9.73□□□□□ -0.85
CHRNA7-202ENST00000437966 UBR4Q5T4S7 5183 aa9.72□□□□□ -0.85
CHRNA7-202ENST00000437966 PSPHP1O15172 72 aa9.71□□□□□ -0.85
CHRNA7-202ENST00000437966 S4R3F8 94 aa9.71□□□□□ -0.85
CHRNA7-202ENST00000437966 RNF213Q63HN8 5207 aa9.7□□□□□ -0.86
CHRNA7-202ENST00000437966 KRTAP3-3Q9BYR6 98 aa9.69□□□□□ -0.86
CHRNA7-202ENST00000437966 LINC01558Q9Y6Z2 57 aa9.68□□□□□ -0.86
CHRNA7-202ENST00000437966 PRR15LQ9BU68 103 aa9.67□□□□□ -0.86
CHRNA7-202ENST00000437966 V9GYY9 64 aa9.67□□□□□ -0.86
CHRNA7-202ENST00000437966 SPTSSBQ8NFR3 76 aa9.65□□□□□ -0.86
CHRNA7-202ENST00000437966 KRTAP19-2Q3LHN2 52 aa9.65□□□□□ -0.87
CHRNA7-202ENST00000437966 Q5VV11 94 aa9.57□□□□□ -0.88
CHRNA7-202ENST00000437966 A0A1B0GU69 56 aa9.55□□□□□ -0.88
CHRNA7-202ENST00000437966 CSAG1Q6PB30 78 aa9.46□□□□□ -0.9
CHRNA7-202ENST00000437966 FLGP20930 4061 aaPredicted RBP9.46□□□□□ -0.9
CHRNA7-202ENST00000437966 SEC61GP60059 68 aa9.45□□□□□ -0.9
CHRNA7-202ENST00000437966 LCE2CQ5TA81 110 aa9.42□□□□□ -0.9
CHRNA7-202ENST00000437966 FAT4Q6V0I7 4981 aa9.36□□□□□ -0.91
CHRNA7-202ENST00000437966 A6NED7 52 aa9.35□□□□□ -0.91
CHRNA7-202ENST00000437966 KRTAP3-2Q9BYR7 98 aa9.35□□□□□ -0.91
CHRNA7-202ENST00000437966 KRTAP10-6P60371 365 aaPredicted RBP9.33□□□□□ -0.92
CHRNA7-202ENST00000437966 ADM2Q7Z4H4 148 aa9.33□□□□□ -0.92
CHRNA7-202ENST00000437966 P0C880 135 aa9.3□□□□□ -0.92
CHRNA7-202ENST00000437966 BRK1Q8WUW1 75 aa9.29□□□□□ -0.92
CHRNA7-202ENST00000437966 A8MU10 97 aa9.28□□□□□ -0.92
CHRNA7-202ENST00000437966 A0A1B0GU33 70 aa9.26□□□□□ -0.93
CHRNA7-202ENST00000437966 UQCR11O14957 56 aa9.22□□□□□ -0.93
CHRNA7-202ENST00000437966 MT1HP80294 61 aa9.22□□□□□ -0.93
CHRNA7-202ENST00000437966 SPATA8Q6RVD6 105 aa9.18□□□□□ -0.94
CHRNA7-202ENST00000437966 H0YAA0 97 aa9.17□□□□□ -0.94
CHRNA7-202ENST00000437966 M0R2T5 61 aa9.17□□□□□ -0.94
CHRNA7-202ENST00000437966 MIR22HGQ0VDD5 57 aa9.17□□□□□ -0.94
CHRNA7-202ENST00000437966 CDC42SE1Q9NRR8 79 aa9.14□□□□□ -0.95
CHRNA7-202ENST00000437966 KRTAP13-4Q3LI77 160 aa9.14□□□□□ -0.95
CHRNA7-202ENST00000437966 LORP23490 312 aaPredicted RBP9.09□□□□□ -0.95
CHRNA7-202ENST00000437966 PRO0628Q9UI54 55 aa9.07□□□□□ -0.96
CHRNA7-202ENST00000437966 A0A0D9SG42 100 aa8.99□□□□□ -0.97
CHRNA7-202ENST00000437966 M0QZ58 72 aa8.96□□□□□ -0.97
CHRNA7-202ENST00000437966 R4GN34 69 aa8.94□□□□□ -0.98
CHRNA7-202ENST00000437966 KRTAP9-8Q9BYQ0 159 aa8.89□□□□□ -0.99
CHRNA7-202ENST00000437966 LINC01554Q52M75 96 aa8.88□□□□□ -0.99
CHRNA7-202ENST00000437966 MT2AP02795 61 aa8.87□□□□□ -0.99
CHRNA7-202ENST00000437966 MT1FP04733 61 aa8.84□□□□□ -0.99
CHRNA7-202ENST00000437966 KRTAP10-10P60014 251 aa8.81□□□□□ -1
CHRNA7-202ENST00000437966 LCE2AQ5TA79 106 aaPredicted RBP8.79□□□□□ -1
CHRNA7-202ENST00000437966 PMAIP1Q13794 54 aa8.76□□□□□ -1.01
CHRNA7-202ENST00000437966 CRIPTQ9P021 101 aa8.76□□□□□ -1.01
CHRNA7-202ENST00000437966 KRTAP12-2P59991 146 aa8.75□□□□□ -1.01
CHRNA7-202ENST00000437966 SPINT4Q6UDR6 99 aa8.75□□□□□ -1.01
CHRNA7-202ENST00000437966 KRTAP12-1P59990 96 aa8.73□□□□□ -1.01
CHRNA7-202ENST00000437966 A6NN06 94 aa8.71□□□□□ -1.02
CHRNA7-202ENST00000437966 K7ERS5 55 aa8.67□□□□□ -1.02
CHRNA7-202ENST00000437966 KRTAP19-1Q8IUB9 90 aa8.67□□□□□ -1.02
CHRNA7-202ENST00000437966 SPRR2GQ9BYE4 73 aa8.63□□□□□ -1.03
CHRNA7-202ENST00000437966 KRTAP9-3Q9BYQ3 159 aa8.56□□□□□ -1.04
CHRNA7-202ENST00000437966 KRTAP19-8Q3LI54 63 aa8.4□□□□□ -1.06
CHRNA7-202ENST00000437966 CAMK2N1Q7Z7J9 78 aa8.4□□□□□ -1.07
CHRNA7-202ENST00000437966 PLAC4Q8WY50 150 aa8.39□□□□□ -1.07
CHRNA7-202ENST00000437966 ROMO1P60602 79 aa8.38□□□□□ -1.07
CHRNA7-202ENST00000437966 LCE2BO14633 110 aa8.35□□□□□ -1.07
CHRNA7-202ENST00000437966 MT1BP07438 61 aa8.35□□□□□ -1.07
CHRNA7-202ENST00000437966 KTN1-AS1Q86SY8 53 aa8.35□□□□□ -1.07
CHRNA7-202ENST00000437966 PRAC1Q96KF2 57 aa8.31□□□□□ -1.08
CHRNA7-202ENST00000437966 C10orf95Q9H7T3 257 aa8.3□□□□□ -1.08
CHRNA7-202ENST00000437966 USH2AO75445 5202 aa8.24□□□□□ -1.09
CHRNA7-202ENST00000437966 MT1XP80297 61 aa8.09□□□□□ -1.11
CHRNA7-202ENST00000437966 KRTAP10-5P60370 271 aa8.08□□□□□ -1.12
CHRNA7-202ENST00000437966 KRTAP25-1Q3LHN0 102 aa8□□□□□ -1.13
CHRNA7-202ENST00000437966 TNP1P09430 55 aa7.95□□□□□ -1.14
CHRNA7-202ENST00000437966 SSPOA2VEC9 5147 aa7.95□□□□□ -1.14
CHRNA7-202ENST00000437966 LCE2DQ5TA82 110 aaPredicted RBP7.94□□□□□ -1.14
CHRNA7-202ENST00000437966 FSIP2Q5CZC0 6907 aa7.91□□□□□ -1.14
CHRNA7-202ENST00000437966 PRO2289Q9P1D8 64 aa7.9□□□□□ -1.14
CHRNA7-202ENST00000437966 KRTAP10-7P60409 375 aaPredicted RBP7.82□□□□□ -1.16
CHRNA7-202ENST00000437966 KRTAP19-6Q3LI70 58 aa7.74□□□□□ -1.17
CHRNA7-202ENST00000437966 LCE3AQ5TA76 89 aa7.69□□□□□ -1.18
CHRNA7-202ENST00000437966 KRTAP9-2Q9BYQ4 174 aa7.69□□□□□ -1.18
CHRNA7-202ENST00000437966 KRTAP10-12P60413 245 aa7.66□□□□□ -1.18
CHRNA7-202ENST00000437966 PP632Q6XCG6 107 aa7.65□□□□□ -1.18
CHRNA7-202ENST00000437966 KMT2DO14686 5537 aa7.62□□□□□ -1.19
CHRNA7-202ENST00000437966 KRTAP23-1A1A580 65 aa7.61□□□□□ -1.19
CHRNA7-202ENST00000437966 FCGBPQ9Y6R7 5405 aaPredicted RBP7.59□□□□□ -1.19
CHRNA7-202ENST00000437966 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
CHRNA7-202ENST00000437966 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
CHRNA7-202ENST00000437966 KRTAP8-1Q8IUC2 63 aa7.44□□□□□ -1.22
CHRNA7-202ENST00000437966 CRCT1Q9UGL9 99 aa7.41□□□□□ -1.22
CHRNA7-202ENST00000437966 KRTAP19-5Q3LI72 72 aa7.36□□□□□ -1.23
CHRNA7-202ENST00000437966 KRTAP12-3P60328 96 aa7.34□□□□□ -1.23
CHRNA7-202ENST00000437966 KRTAP19-7Q3SYF9 63 aa7.22□□□□□ -1.25
CHRNA7-202ENST00000437966 MACF1Q9UPN3 7388 aaKnown RBP7.2□□□□□ -1.26
CHRNA7-202ENST00000437966 KRTAP15-1Q3LI76 137 aa7.19□□□□□ -1.26
CHRNA7-202ENST00000437966 MT1EP04732 61 aa7.08□□□□□ -1.28
CHRNA7-202ENST00000437966 SYNE2Q8WXH0 6885 aaKnown RBP7.06□□□□□ -1.28
CHRNA7-202ENST00000437966 KRTAP9-6A0A140TA67 174 aa7.05□□□□□ -1.28
CHRNA7-202ENST00000437966 MUC12Q9UKN1 5478 aa7□□□□□ -1.29
CHRNA7-202ENST00000437966 SPRR2FQ96RM1 72 aa6.95□□□□□ -1.3
CHRNA7-202ENST00000437966 MT1LQ93083 61 aa6.95□□□□□ -1.3
CHRNA7-202ENST00000437966 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.86□□□□□ -1.31
CHRNA7-202ENST00000437966 LCE3CQ5T5A8 94 aa6.86□□□□□ -1.31
CHRNA7-202ENST00000437966 KRTAP4-7Q9BYR0 210 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms