RNA–Protein interactions for RNA: ENST00000437316.6

HLA-DQB2-232, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB2, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-232ENST00000437316 A8MUN3 132 aa6.68□□□□□ -1.34
HLA-DQB2-232ENST00000437316 H3BPC8 53 aa6.68□□□□□ -1.34
HLA-DQB2-232ENST00000437316 IMUPQ9GZP8 106 aa6.68□□□□□ -1.34
HLA-DQB2-232ENST00000437316 NDUFC1O43677 76 aa6.64□□□□□ -1.35
HLA-DQB2-232ENST00000437316 SSPOA2VEC9 5147 aa6.62□□□□□ -1.35
HLA-DQB2-232ENST00000437316 KLKP1Q107X0 134 aa6.61□□□□□ -1.35
HLA-DQB2-232ENST00000437316 SMIM20Q8N5G0 67 aa6.61□□□□□ -1.35
HLA-DQB2-232ENST00000437316 KRTAP4-8Q9BYQ9 185 aa6.61□□□□□ -1.35
HLA-DQB2-232ENST00000437316 MT-ATP8P03928 68 aa6.6□□□□□ -1.35
HLA-DQB2-232ENST00000437316 KRTAP19-1Q8IUB9 90 aa6.55□□□□□ -1.36
HLA-DQB2-232ENST00000437316 TRAV7A0A075B6U4 112 aa6.54□□□□□ -1.36
HLA-DQB2-232ENST00000437316 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.5□□□□□ -1.37
HLA-DQB2-232ENST00000437316 CRIPTQ9P021 101 aa6.5□□□□□ -1.37
HLA-DQB2-232ENST00000437316 FCGBPQ9Y6R7 5405 aaPredicted RBP6.5□□□□□ -1.37
HLA-DQB2-232ENST00000437316 DMAC1Q96GE9 116 aa6.49□□□□□ -1.37
HLA-DQB2-232ENST00000437316 H0YAA0 97 aa6.48□□□□□ -1.37
HLA-DQB2-232ENST00000437316 KRTAP19-6Q3LI70 58 aa6.47□□□□□ -1.37
HLA-DQB2-232ENST00000437316 Q5VV11 94 aa6.46□□□□□ -1.38
HLA-DQB2-232ENST00000437316 SPRR2GQ9BYE4 73 aa6.45□□□□□ -1.38
HLA-DQB2-232ENST00000437316 PCP4P48539 62 aa6.42□□□□□ -1.38
HLA-DQB2-232ENST00000437316 ADM2Q7Z4H4 148 aa6.42□□□□□ -1.38
HLA-DQB2-232ENST00000437316 ACYP2P14621 99 aa6.41□□□□□ -1.38
HLA-DQB2-232ENST00000437316 C20orf197Q8N268 126 aa6.41□□□□□ -1.38
HLA-DQB2-232ENST00000437316 KRTAP9-7A8MTY7 169 aa6.4□□□□□ -1.38
HLA-DQB2-232ENST00000437316 SPTSSBQ8NFR3 76 aa6.38□□□□□ -1.39
HLA-DQB2-232ENST00000437316 KRTAP19-8Q3LI54 63 aa6.37□□□□□ -1.39
HLA-DQB2-232ENST00000437316 SERP2Q8N6R1 65 aa6.37□□□□□ -1.39
HLA-DQB2-232ENST00000437316 SNURFQ9Y675 71 aa6.36□□□□□ -1.39
HLA-DQB2-232ENST00000437316 CHKB-CPT1BH3BT56 60 aa6.35□□□□□ -1.39
HLA-DQB2-232ENST00000437316 MACF1Q9UPN3 7388 aaKnown RBP6.34□□□□□ -1.39
HLA-DQB2-232ENST00000437316 KRTAP4-12Q9BQ66 201 aa6.34□□□□□ -1.39
HLA-DQB2-232ENST00000437316 A6NN06 94 aa6.32□□□□□ -1.4
HLA-DQB2-232ENST00000437316 MT1BP07438 61 aa6.32□□□□□ -1.4
HLA-DQB2-232ENST00000437316 LCE3BQ5TA77 95 aa6.3□□□□□ -1.4
HLA-DQB2-232ENST00000437316 R4GN34 69 aa6.3□□□□□ -1.4
HLA-DQB2-232ENST00000437316 SPANXA2-OT1Q8N9U9 137 aa6.29□□□□□ -1.4
HLA-DQB2-232ENST00000437316 M0QZ58 72 aa6.24□□□□□ -1.41
HLA-DQB2-232ENST00000437316 P0C880 135 aa6.24□□□□□ -1.41
HLA-DQB2-232ENST00000437316 SYNE2Q8WXH0 6885 aaKnown RBP6.21□□□□□ -1.42
HLA-DQB2-232ENST00000437316 KRTAP10-5P60370 271 aa6.2□□□□□ -1.42
HLA-DQB2-232ENST00000437316 PLAC4Q8WY50 150 aa6.2□□□□□ -1.42
HLA-DQB2-232ENST00000437316 COX7CP15954 63 aa6.19□□□□□ -1.42
HLA-DQB2-232ENST00000437316 KRTAP9-9Q9BYP9 154 aa6.19□□□□□ -1.42
HLA-DQB2-232ENST00000437316 KRTAP9-4Q9BYQ2 154 aa6.19□□□□□ -1.42
HLA-DQB2-232ENST00000437316 LINC01554Q52M75 96 aa6.15□□□□□ -1.42
HLA-DQB2-232ENST00000437316 PRO2289Q9P1D8 64 aa6.15□□□□□ -1.42
HLA-DQB2-232ENST00000437316 SVIPQ8NHG7 77 aa6.14□□□□□ -1.43
HLA-DQB2-232ENST00000437316 COA5Q86WW8 74 aa6.1□□□□□ -1.43
HLA-DQB2-232ENST00000437316 ANAPC13Q9BS18 74 aa6.1□□□□□ -1.43
HLA-DQB2-232ENST00000437316 KRTAP4-8A0A0G2JLE6 195 aa6.08□□□□□ -1.44
HLA-DQB2-232ENST00000437316 KRTAP6-3Q3LI67 103 aa6.08□□□□□ -1.44
HLA-DQB2-232ENST00000437316 SEC61GP60059 68 aa6.05□□□□□ -1.44
HLA-DQB2-232ENST00000437316 H7BZZ5 65 aa6.04□□□□□ -1.44
HLA-DQB2-232ENST00000437316 SERP1Q9Y6X1 66 aa6.01□□□□□ -1.45
HLA-DQB2-232ENST00000437316 MT1XP80297 61 aa5.98□□□□□ -1.45
HLA-DQB2-232ENST00000437316 CYSTM1Q9H1C7 97 aa5.97□□□□□ -1.45
HLA-DQB2-232ENST00000437316 ATP5EP56381 51 aaPredicted RBP5.9□□□□□ -1.46
HLA-DQB2-232ENST00000437316 LCE1DQ5T752 114 aa5.89□□□□□ -1.47
HLA-DQB2-232ENST00000437316 KRTAP4-7Q9BYR0 210 aa5.89□□□□□ -1.47
HLA-DQB2-232ENST00000437316 CCDC179H3BU77 68 aa5.88□□□□□ -1.47
HLA-DQB2-232ENST00000437316 NEBP20929 6669 aa5.87□□□□□ -1.47
HLA-DQB2-232ENST00000437316 KRTAP12-2P59991 146 aa5.85□□□□□ -1.47
HLA-DQB2-232ENST00000437316 KRTAP13-4Q3LI77 160 aa5.85□□□□□ -1.47
HLA-DQB2-232ENST00000437316 CAMK2N1Q7Z7J9 78 aa5.85□□□□□ -1.47
HLA-DQB2-232ENST00000437316 A0A1B0GU33 70 aa5.84□□□□□ -1.47
HLA-DQB2-232ENST00000437316 A0A1B0GU69 56 aa5.83□□□□□ -1.48
HLA-DQB2-232ENST00000437316 KRTAP5-9P26371 169 aa5.83□□□□□ -1.48
HLA-DQB2-232ENST00000437316 MUC12Q9UKN1 5478 aa5.8□□□□□ -1.48
HLA-DQB2-232ENST00000437316 A0A0D9SG42 100 aa5.8□□□□□ -1.48
HLA-DQB2-232ENST00000437316 KRTAP8-1Q8IUC2 63 aa5.79□□□□□ -1.48
HLA-DQB2-232ENST00000437316 KMT2DO14686 5537 aa5.77□□□□□ -1.49
HLA-DQB2-232ENST00000437316 PRR15LQ9BU68 103 aa5.77□□□□□ -1.49
HLA-DQB2-232ENST00000437316 SPATA8Q6RVD6 105 aa5.76□□□□□ -1.49
HLA-DQB2-232ENST00000437316 TMEM258P61165 79 aa5.75□□□□□ -1.49
HLA-DQB2-232ENST00000437316 SPRR2FQ96RM1 72 aa5.75□□□□□ -1.49
HLA-DQB2-232ENST00000437316 LCE4AQ5TA78 99 aa5.74□□□□□ -1.49
HLA-DQB2-232ENST00000437316 SMIM26A0A096LP01 95 aa5.73□□□□□ -1.49
HLA-DQB2-232ENST00000437316 MDN1Q9NU22 5596 aa5.72□□□□□ -1.49
HLA-DQB2-232ENST00000437316 SPINT4Q6UDR6 99 aa5.72□□□□□ -1.49
HLA-DQB2-232ENST00000437316 KRTAP4-9Q9BYQ8 210 aa5.72□□□□□ -1.49
HLA-DQB2-232ENST00000437316 KRTAP10-7P60409 375 aaPredicted RBP5.7□□□□□ -1.5
HLA-DQB2-232ENST00000437316 KRTAP10-12P60413 245 aa5.69□□□□□ -1.5
HLA-DQB2-232ENST00000437316 SPRR2EP22531 72 aa5.64□□□□□ -1.51
HLA-DQB2-232ENST00000437316 SPRR2BP35325 72 aa5.64□□□□□ -1.51
HLA-DQB2-232ENST00000437316 SPRR2AP35326 72 aa5.64□□□□□ -1.51
HLA-DQB2-232ENST00000437316 KRTAP4-2Q9BYR5 136 aa5.64□□□□□ -1.51
HLA-DQB2-232ENST00000437316 RPS28P62857 69 aaKnown RBP5.62□□□□□ -1.51
HLA-DQB2-232ENST00000437316 LINC01558Q9Y6Z2 57 aa5.62□□□□□ -1.51
HLA-DQB2-232ENST00000437316 KRTAP12-1P59990 96 aa5.61□□□□□ -1.51
HLA-DQB2-232ENST00000437316 KRTAP20-1Q3LI63 56 aa5.61□□□□□ -1.51
HLA-DQB2-232ENST00000437316 KRTAP19-4Q3LI73 84 aa5.59□□□□□ -1.51
HLA-DQB2-232ENST00000437316 A8MU10 97 aa5.56□□□□□ -1.52
HLA-DQB2-232ENST00000437316 H3BS24 57 aa5.54□□□□□ -1.52
HLA-DQB2-232ENST00000437316 UQCR11O14957 56 aa5.52□□□□□ -1.53
HLA-DQB2-232ENST00000437316 KRTAP4-11Q9BYQ6 195 aa5.52□□□□□ -1.53
HLA-DQB2-232ENST00000437316 LCE1AQ5T7P2 110 aa5.51□□□□□ -1.53
HLA-DQB2-232ENST00000437316 V9GYY9 64 aa5.48□□□□□ -1.53
HLA-DQB2-232ENST00000437316 KRTAP2-3P0C7H8 128 aa5.47□□□□□ -1.53
HLA-DQB2-232ENST00000437316 KRTAP2-4Q9BYR9 128 aa5.47□□□□□ -1.53
HLA-DQB2-232ENST00000437316 SPRR2DP22532 72 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms