RNA–Protein interactions for RNA: ENST00000437152.7

SH2D3A-202, Transcript of SH2 domain containing 3A, humanhuman

TSL 2 BASIC

Gene SH2D3A, Length 2,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-202ENST00000437152 HERC1Q15751 4861 aa12.26□□□□□ -0.45
SH2D3A-202ENST00000437152 SPATA8Q6RVD6 105 aa12.25□□□□□ -0.45
SH2D3A-202ENST00000437152 A6NN06 94 aa12.24□□□□□ -0.45
SH2D3A-202ENST00000437152 SEC61GP60059 68 aa12.24□□□□□ -0.45
SH2D3A-202ENST00000437152 COX6B2Q6YFQ2 88 aa12.24□□□□□ -0.45
SH2D3A-202ENST00000437152 RPL37P61927 97 aaKnown RBP12.23□□□□□ -0.45
SH2D3A-202ENST00000437152 MIR22HGQ0VDD5 57 aa12.18□□□□□ -0.46
SH2D3A-202ENST00000437152 XP32Q5T750 250 aa12.16□□□□□ -0.46
SH2D3A-202ENST00000437152 KTN1-AS1Q86SY8 53 aa12.11□□□□□ -0.47
SH2D3A-202ENST00000437152 LPAP08519 4548 aa11.99□□□□□ -0.49
SH2D3A-202ENST00000437152 HMCN2Q8NDA2 5059 aa11.94□□□□□ -0.5
SH2D3A-202ENST00000437152 A0A1B0GU33 70 aa11.91□□□□□ -0.5
SH2D3A-202ENST00000437152 TPRXLQ17RH7 258 aa11.91□□□□□ -0.5
SH2D3A-202ENST00000437152 H1FX-AS1Q4G0G2 97 aa11.88□□□□□ -0.51
SH2D3A-202ENST00000437152 H0YAA0 97 aa11.86□□□□□ -0.51
SH2D3A-202ENST00000437152 LRP2P98164 4655 aa11.84□□□□□ -0.51
SH2D3A-202ENST00000437152 KRTAP3-3Q9BYR6 98 aa11.83□□□□□ -0.52
SH2D3A-202ENST00000437152 S4R3F8 94 aa11.79□□□□□ -0.52
SH2D3A-202ENST00000437152 RBM12B-AS1Q9P1G2 102 aa11.77□□□□□ -0.52
SH2D3A-202ENST00000437152 KRTAP10-6P60371 365 aaPredicted RBP11.65□□□□□ -0.54
SH2D3A-202ENST00000437152 KRTAP3-2Q9BYR7 98 aa11.59□□□□□ -0.55
SH2D3A-202ENST00000437152 ADM2Q7Z4H4 148 aa11.53□□□□□ -0.56
SH2D3A-202ENST00000437152 PRAC1Q96KF2 57 aa11.53□□□□□ -0.56
SH2D3A-202ENST00000437152 UBR4Q5T4S7 5183 aa11.51□□□□□ -0.57
SH2D3A-202ENST00000437152 K7ERS5 55 aa11.5□□□□□ -0.57
SH2D3A-202ENST00000437152 MUC17Q685J3 4493 aa11.48□□□□□ -0.57
SH2D3A-202ENST00000437152 SEC61BP60468 96 aaKnown RBP11.47□□□□□ -0.57
SH2D3A-202ENST00000437152 CSAG1Q6PB30 78 aa11.46□□□□□ -0.57
SH2D3A-202ENST00000437152 KRTAP13-4Q3LI77 160 aa11.42□□□□□ -0.58
SH2D3A-202ENST00000437152 P0C880 135 aa11.41□□□□□ -0.58
SH2D3A-202ENST00000437152 MUC2Q02817 5179 aa11.39□□□□□ -0.59
SH2D3A-202ENST00000437152 RNF213Q63HN8 5207 aa11.31□□□□□ -0.6
SH2D3A-202ENST00000437152 KRTAP4-1Q9BYQ7 146 aa11.3□□□□□ -0.6
SH2D3A-202ENST00000437152 A0A0D9SG42 100 aa11.26□□□□□ -0.61
SH2D3A-202ENST00000437152 M0QZ58 72 aa11.21□□□□□ -0.62
SH2D3A-202ENST00000437152 LINC01554Q52M75 96 aa11.18□□□□□ -0.62
SH2D3A-202ENST00000437152 ROMO1P60602 79 aa11.15□□□□□ -0.62
SH2D3A-202ENST00000437152 KRTAP25-1Q3LHN0 102 aa11.11□□□□□ -0.63
SH2D3A-202ENST00000437152 KRTAP12-2P59991 146 aa11.04□□□□□ -0.64
SH2D3A-202ENST00000437152 KRTAP12-1P59990 96 aa11.03□□□□□ -0.64
SH2D3A-202ENST00000437152 KRTAP19-2Q3LHN2 52 aa11.02□□□□□ -0.65
SH2D3A-202ENST00000437152 SPINT4Q6UDR6 99 aa10.95□□□□□ -0.66
SH2D3A-202ENST00000437152 R4GN34 69 aa10.92□□□□□ -0.66
SH2D3A-202ENST00000437152 FAT4Q6V0I7 4981 aa10.9□□□□□ -0.66
SH2D3A-202ENST00000437152 CRIPTQ9P021 101 aa10.85□□□□□ -0.67
SH2D3A-202ENST00000437152 LCE2CQ5TA81 110 aa10.82□□□□□ -0.68
SH2D3A-202ENST00000437152 FLGP20930 4061 aaPredicted RBP10.78□□□□□ -0.68
SH2D3A-202ENST00000437152 LORP23490 312 aaPredicted RBP10.74□□□□□ -0.69
SH2D3A-202ENST00000437152 MT1HP80294 61 aa10.63□□□□□ -0.71
SH2D3A-202ENST00000437152 C10orf95Q9H7T3 257 aa10.58□□□□□ -0.72
SH2D3A-202ENST00000437152 LCE2AQ5TA79 106 aaPredicted RBP10.53□□□□□ -0.72
SH2D3A-202ENST00000437152 M0R2T5 61 aa10.52□□□□□ -0.73
SH2D3A-202ENST00000437152 H3BS24 57 aa10.36□□□□□ -0.75
SH2D3A-202ENST00000437152 CAMK2N1Q7Z7J9 78 aa10.31□□□□□ -0.76
SH2D3A-202ENST00000437152 KRTAP9-8Q9BYQ0 159 aa10.18□□□□□ -0.78
SH2D3A-202ENST00000437152 SPRR2GQ9BYE4 73 aa10.15□□□□□ -0.78
SH2D3A-202ENST00000437152 MT2AP02795 61 aa10.1□□□□□ -0.79
SH2D3A-202ENST00000437152 PP632Q6XCG6 107 aa10.08□□□□□ -0.8
SH2D3A-202ENST00000437152 MT1FP04733 61 aa10.04□□□□□ -0.8
SH2D3A-202ENST00000437152 KRTAP19-1Q8IUB9 90 aa10.04□□□□□ -0.8
SH2D3A-202ENST00000437152 KRTAP15-1Q3LI76 137 aa10.04□□□□□ -0.8
SH2D3A-202ENST00000437152 KRTAP10-10P60014 251 aa10.02□□□□□ -0.8
SH2D3A-202ENST00000437152 PLAC4Q8WY50 150 aa9.97□□□□□ -0.81
SH2D3A-202ENST00000437152 TNP1P09430 55 aa9.95□□□□□ -0.82
SH2D3A-202ENST00000437152 KRTAP23-1A1A580 65 aa9.89□□□□□ -0.83
SH2D3A-202ENST00000437152 KRTAP9-3Q9BYQ3 159 aa9.82□□□□□ -0.84
SH2D3A-202ENST00000437152 KRTAP19-8Q3LI54 63 aa9.76□□□□□ -0.85
SH2D3A-202ENST00000437152 LCE2DQ5TA82 110 aaPredicted RBP9.69□□□□□ -0.86
SH2D3A-202ENST00000437152 LCE2BO14633 110 aa9.64□□□□□ -0.87
SH2D3A-202ENST00000437152 NDUFAF8A1L188 74 aa9.62□□□□□ -0.87
SH2D3A-202ENST00000437152 KRTAP9-2Q9BYQ4 174 aa9.6□□□□□ -0.87
SH2D3A-202ENST00000437152 MT1BP07438 61 aa9.56□□□□□ -0.88
SH2D3A-202ENST00000437152 USH2AO75445 5202 aa9.54□□□□□ -0.88
SH2D3A-202ENST00000437152 FSIP2Q5CZC0 6907 aa9.53□□□□□ -0.88
SH2D3A-202ENST00000437152 KRTAP10-5P60370 271 aa9.43□□□□□ -0.9
SH2D3A-202ENST00000437152 MT1XP80297 61 aa9.42□□□□□ -0.9
SH2D3A-202ENST00000437152 LCE3AQ5TA76 89 aa9.38□□□□□ -0.91
SH2D3A-202ENST00000437152 SSPOA2VEC9 5147 aa9.31□□□□□ -0.92
SH2D3A-202ENST00000437152 LUZP6Q538Z0 58 aa9.27□□□□□ -0.92
SH2D3A-202ENST00000437152 KRTAP8-1Q8IUC2 63 aa9.26□□□□□ -0.93
SH2D3A-202ENST00000437152 SPRR5A0A1B0GTR4 108 aa9.24□□□□□ -0.93
SH2D3A-202ENST00000437152 PRO2289Q9P1D8 64 aa9.24□□□□□ -0.93
SH2D3A-202ENST00000437152 CRCT1Q9UGL9 99 aa9.18□□□□□ -0.94
SH2D3A-202ENST00000437152 KRTAP10-12P60413 245 aa9.17□□□□□ -0.94
SH2D3A-202ENST00000437152 KRTAP19-6Q3LI70 58 aa9.12□□□□□ -0.95
SH2D3A-202ENST00000437152 KRTAP10-7P60409 375 aaPredicted RBP9.08□□□□□ -0.96
SH2D3A-202ENST00000437152 KRTAP9-6A0A140TA67 174 aa9□□□□□ -0.97
SH2D3A-202ENST00000437152 FCGBPQ9Y6R7 5405 aaPredicted RBP9□□□□□ -0.97
SH2D3A-202ENST00000437152 KRTAP12-3P60328 96 aa9□□□□□ -0.97
SH2D3A-202ENST00000437152 A0A0A0MQY5 61 aa8.71□□□□□ -1.01
SH2D3A-202ENST00000437152 KRTAP19-5Q3LI72 72 aa8.67□□□□□ -1.02
SH2D3A-202ENST00000437152 MACF1Q9UPN3 7388 aaKnown RBP8.65□□□□□ -1.02
SH2D3A-202ENST00000437152 KMT2DO14686 5537 aa8.59□□□□□ -1.03
SH2D3A-202ENST00000437152 KRTAP4-8A0A0G2JLE6 195 aa8.53□□□□□ -1.04
SH2D3A-202ENST00000437152 KRTAP4-8Q9BYQ9 185 aa8.53□□□□□ -1.04
SH2D3A-202ENST00000437152 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.51□□□□□ -1.05
SH2D3A-202ENST00000437152 LCE3CQ5T5A8 94 aa8.46□□□□□ -1.05
SH2D3A-202ENST00000437152 SYNE2Q8WXH0 6885 aaKnown RBP8.46□□□□□ -1.06
SH2D3A-202ENST00000437152 KRTAP19-7Q3SYF9 63 aa8.41□□□□□ -1.06
SH2D3A-202ENST00000437152 KRTAP19-4Q3LI73 84 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms