RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 SPTSSBQ8NFR3 76 aa9.94□□□□□ -0.82
FAM3A-212ENST00000434658 LRP2P98164 4655 aa9.91□□□□□ -0.82
FAM3A-212ENST00000434658 LPAP08519 4548 aa9.91□□□□□ -0.82
FAM3A-212ENST00000434658 UBR4Q5T4S7 5183 aa9.88□□□□□ -0.83
FAM3A-212ENST00000434658 A6NN06 94 aa9.84□□□□□ -0.83
FAM3A-212ENST00000434658 KRTAP3-1Q9BYR8 98 aa9.82□□□□□ -0.84
FAM3A-212ENST00000434658 TPRXLQ17RH7 258 aa9.79□□□□□ -0.84
FAM3A-212ENST00000434658 SPATA8Q6RVD6 105 aa9.79□□□□□ -0.84
FAM3A-212ENST00000434658 UQCR11O14957 56 aa9.78□□□□□ -0.84
FAM3A-212ENST00000434658 MIR22HGQ0VDD5 57 aa9.73□□□□□ -0.85
FAM3A-212ENST00000434658 KTN1-AS1Q86SY8 53 aa9.73□□□□□ -0.85
FAM3A-212ENST00000434658 SEC61GP60059 68 aa9.72□□□□□ -0.85
FAM3A-212ENST00000434658 COX6B2Q6YFQ2 88 aa9.71□□□□□ -0.85
FAM3A-212ENST00000434658 RPL37P61927 97 aaKnown RBP9.69□□□□□ -0.86
FAM3A-212ENST00000434658 RNF213Q63HN8 5207 aa9.65□□□□□ -0.86
FAM3A-212ENST00000434658 XP32Q5T750 250 aa9.64□□□□□ -0.87
FAM3A-212ENST00000434658 MUC17Q685J3 4493 aa9.56□□□□□ -0.88
FAM3A-212ENST00000434658 SEC61BP60468 96 aaKnown RBP9.49□□□□□ -0.89
FAM3A-212ENST00000434658 A0A1B0GU33 70 aa9.49□□□□□ -0.89
FAM3A-212ENST00000434658 H0YAA0 97 aa9.48□□□□□ -0.89
FAM3A-212ENST00000434658 H1FX-AS1Q4G0G2 97 aa9.48□□□□□ -0.89
FAM3A-212ENST00000434658 MUC2Q02817 5179 aa9.47□□□□□ -0.89
FAM3A-212ENST00000434658 KRTAP3-3Q9BYR6 98 aa9.42□□□□□ -0.9
FAM3A-212ENST00000434658 RBM12B-AS1Q9P1G2 102 aa9.38□□□□□ -0.91
FAM3A-212ENST00000434658 S4R3F8 94 aa9.37□□□□□ -0.91
FAM3A-212ENST00000434658 KRTAP4-1Q9BYQ7 146 aa9.36□□□□□ -0.91
FAM3A-212ENST00000434658 ADM2Q7Z4H4 148 aa9.3□□□□□ -0.92
FAM3A-212ENST00000434658 PRAC1Q96KF2 57 aa9.29□□□□□ -0.92
FAM3A-212ENST00000434658 KRTAP10-6P60371 365 aaPredicted RBP9.28□□□□□ -0.92
FAM3A-212ENST00000434658 KRTAP3-2Q9BYR7 98 aa9.25□□□□□ -0.93
FAM3A-212ENST00000434658 FAT4Q6V0I7 4981 aa9.22□□□□□ -0.93
FAM3A-212ENST00000434658 K7ERS5 55 aa9.14□□□□□ -0.95
FAM3A-212ENST00000434658 KRTAP13-4Q3LI77 160 aa9.13□□□□□ -0.95
FAM3A-212ENST00000434658 P0C880 135 aa9.1□□□□□ -0.95
FAM3A-212ENST00000434658 CSAG1Q6PB30 78 aa9.08□□□□□ -0.96
FAM3A-212ENST00000434658 KRTAP19-2Q3LHN2 52 aa9.07□□□□□ -0.96
FAM3A-212ENST00000434658 LCE2AQ5TA79 106 aaPredicted RBP9.07□□□□□ -0.96
FAM3A-212ENST00000434658 LCE2CQ5TA81 110 aa9.05□□□□□ -0.96
FAM3A-212ENST00000434658 A0A0D9SG42 100 aa8.99□□□□□ -0.97
FAM3A-212ENST00000434658 LINC01554Q52M75 96 aa8.96□□□□□ -0.97
FAM3A-212ENST00000434658 MT1HP80294 61 aa8.92□□□□□ -0.98
FAM3A-212ENST00000434658 KRTAP25-1Q3LHN0 102 aa8.91□□□□□ -0.98
FAM3A-212ENST00000434658 ROMO1P60602 79 aa8.9□□□□□ -0.98
FAM3A-212ENST00000434658 M0QZ58 72 aa8.88□□□□□ -0.99
FAM3A-212ENST00000434658 KRTAP12-2P59991 146 aa8.82□□□□□ -1
FAM3A-212ENST00000434658 M0R2T5 61 aa8.8□□□□□ -1
FAM3A-212ENST00000434658 FLGP20930 4061 aaPredicted RBP8.8□□□□□ -1
FAM3A-212ENST00000434658 KRTAP12-1P59990 96 aa8.8□□□□□ -1
FAM3A-212ENST00000434658 CRIPTQ9P021 101 aa8.73□□□□□ -1.01
FAM3A-212ENST00000434658 SPINT4Q6UDR6 99 aa8.72□□□□□ -1.01
FAM3A-212ENST00000434658 LORP23490 312 aaPredicted RBP8.68□□□□□ -1.02
FAM3A-212ENST00000434658 R4GN34 69 aa8.66□□□□□ -1.02
FAM3A-212ENST00000434658 KRTAP9-2Q9BYQ4 174 aa8.58□□□□□ -1.04
FAM3A-212ENST00000434658 LCE2DQ5TA82 110 aaPredicted RBP8.5□□□□□ -1.05
FAM3A-212ENST00000434658 C10orf95Q9H7T3 257 aa8.5□□□□□ -1.05
FAM3A-212ENST00000434658 KRTAP9-8Q9BYQ0 159 aa8.49□□□□□ -1.05
FAM3A-212ENST00000434658 MT2AP02795 61 aa8.39□□□□□ -1.07
FAM3A-212ENST00000434658 MT1FP04733 61 aa8.33□□□□□ -1.08
FAM3A-212ENST00000434658 KRTAP10-10P60014 251 aa8.31□□□□□ -1.08
FAM3A-212ENST00000434658 FSIP2Q5CZC0 6907 aa8.24□□□□□ -1.09
FAM3A-212ENST00000434658 KRTAP9-3Q9BYQ3 159 aa8.2□□□□□ -1.1
FAM3A-212ENST00000434658 KRTAP9-6A0A140TA67 174 aa8.19□□□□□ -1.1
FAM3A-212ENST00000434658 CAMK2N1Q7Z7J9 78 aa8.18□□□□□ -1.1
FAM3A-212ENST00000434658 CRCT1Q9UGL9 99 aa8.16□□□□□ -1.1
FAM3A-212ENST00000434658 USH2AO75445 5202 aa8.11□□□□□ -1.11
FAM3A-212ENST00000434658 LCE2BO14633 110 aa8.1□□□□□ -1.11
FAM3A-212ENST00000434658 KRTAP15-1Q3LI76 137 aa8.07□□□□□ -1.12
FAM3A-212ENST00000434658 SPRR2GQ9BYE4 73 aa8.03□□□□□ -1.12
FAM3A-212ENST00000434658 PP632Q6XCG6 107 aa8□□□□□ -1.13
FAM3A-212ENST00000434658 SSPOA2VEC9 5147 aa7.97□□□□□ -1.13
FAM3A-212ENST00000434658 KRTAP19-1Q8IUB9 90 aa7.96□□□□□ -1.14
FAM3A-212ENST00000434658 TNP1P09430 55 aa7.89□□□□□ -1.15
FAM3A-212ENST00000434658 PLAC4Q8WY50 150 aa7.87□□□□□ -1.15
FAM3A-212ENST00000434658 KRTAP23-1A1A580 65 aa7.84□□□□□ -1.15
FAM3A-212ENST00000434658 H3BS24 57 aa7.81□□□□□ -1.16
FAM3A-212ENST00000434658 KRTAP19-6Q3LI70 58 aa7.76□□□□□ -1.17
FAM3A-212ENST00000434658 KRTAP19-8Q3LI54 63 aa7.75□□□□□ -1.17
FAM3A-212ENST00000434658 FCGBPQ9Y6R7 5405 aaPredicted RBP7.73□□□□□ -1.17
FAM3A-212ENST00000434658 MT1BP07438 61 aa7.72□□□□□ -1.17
FAM3A-212ENST00000434658 NDUFAF8A1L188 74 aa7.71□□□□□ -1.17
FAM3A-212ENST00000434658 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.58□□□□□ -1.2
FAM3A-212ENST00000434658 KRTAP10-5P60370 271 aa7.49□□□□□ -1.21
FAM3A-212ENST00000434658 MT1XP80297 61 aa7.48□□□□□ -1.21
FAM3A-212ENST00000434658 LCE3AQ5TA76 89 aa7.48□□□□□ -1.21
FAM3A-212ENST00000434658 MACF1Q9UPN3 7388 aaKnown RBP7.47□□□□□ -1.21
FAM3A-212ENST00000434658 KRTAP9-7A8MTY7 169 aa7.4□□□□□ -1.23
FAM3A-212ENST00000434658 SPRR5A0A1B0GTR4 108 aa7.39□□□□□ -1.23
FAM3A-212ENST00000434658 LUZP6Q538Z0 58 aa7.39□□□□□ -1.23
FAM3A-212ENST00000434658 SYNE2Q8WXH0 6885 aaKnown RBP7.37□□□□□ -1.23
FAM3A-212ENST00000434658 KRTAP8-1Q8IUC2 63 aa7.34□□□□□ -1.23
FAM3A-212ENST00000434658 PRO2289Q9P1D8 64 aa7.34□□□□□ -1.23
FAM3A-212ENST00000434658 KRTAP10-12P60413 245 aa7.27□□□□□ -1.25
FAM3A-212ENST00000434658 KRTAP10-7P60409 375 aaPredicted RBP7.22□□□□□ -1.25
FAM3A-212ENST00000434658 KRTAP6-3Q3LI67 103 aa7.18□□□□□ -1.26
FAM3A-212ENST00000434658 KRTAP12-3P60328 96 aa7.15□□□□□ -1.27
FAM3A-212ENST00000434658 KMT2DO14686 5537 aa7.03□□□□□ -1.28
FAM3A-212ENST00000434658 KRTAP5-9P26371 169 aa6.97□□□□□ -1.29
FAM3A-212ENST00000434658 MUC12Q9UKN1 5478 aa6.93□□□□□ -1.3
FAM3A-212ENST00000434658 KRTAP4-8A0A0G2JLE6 195 aa6.92□□□□□ -1.3
FAM3A-212ENST00000434658 KRTAP4-8Q9BYQ9 185 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms