RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 UQCRQO14949 82 aa9.04□□□□□ -0.96
HLA-F-220ENST00000434407 TP53AIP1Q9HCN2 124 aa9.04□□□□□ -0.96
HLA-F-220ENST00000434407 COX7CP15954 63 aa9.02□□□□□ -0.97
HLA-F-220ENST00000434407 KRTAP9-8Q9BYQ0 159 aa9.02□□□□□ -0.97
HLA-F-220ENST00000434407 C5orf47Q569G3 176 aa8.98□□□□□ -0.97
HLA-F-220ENST00000434407 KRTAP9-3Q9BYQ3 159 aa8.97□□□□□ -0.97
HLA-F-220ENST00000434407 CCDC179H3BU77 68 aa8.93□□□□□ -0.98
HLA-F-220ENST00000434407 MP68P56378 58 aa8.93□□□□□ -0.98
HLA-F-220ENST00000434407 H1FX-AS1Q4G0G2 97 aa8.93□□□□□ -0.98
HLA-F-220ENST00000434407 H0Y9P7 68 aa8.92□□□□□ -0.98
HLA-F-220ENST00000434407 TRAV22A0A0B4J277 110 aa8.91□□□□□ -0.98
HLA-F-220ENST00000434407 C20orf197Q8N268 126 aa8.9□□□□□ -0.98
HLA-F-220ENST00000434407 MT2AP02795 61 aa8.89□□□□□ -0.99
HLA-F-220ENST00000434407 H3BPC8 53 aa8.88□□□□□ -0.99
HLA-F-220ENST00000434407 C4orf26Q17RF5 130 aa8.88□□□□□ -0.99
HLA-F-220ENST00000434407 LINC00208Q96KT6 92 aa8.86□□□□□ -0.99
HLA-F-220ENST00000434407 SNURFQ9Y675 71 aa8.85□□□□□ -0.99
HLA-F-220ENST00000434407 C1orf64Q8NEQ6 169 aa8.84□□□□□ -0.99
HLA-F-220ENST00000434407 MT1FP04733 61 aa8.83□□□□□ -1
HLA-F-220ENST00000434407 KLKP1Q107X0 134 aa8.83□□□□□ -1
HLA-F-220ENST00000434407 KRTAP3-1Q9BYR8 98 aa8.82□□□□□ -1
HLA-F-220ENST00000434407 CYP4F30PQ9H0H9 118 aa8.82□□□□□ -1
HLA-F-220ENST00000434407 LOC101927531A0A1B0GV80 90 aa8.78□□□□□ -1
HLA-F-220ENST00000434407 NDUFC1O43677 76 aa8.76□□□□□ -1.01
HLA-F-220ENST00000434407 KRTAP10-10P60014 251 aa8.76□□□□□ -1.01
HLA-F-220ENST00000434407 CRCT1Q9UGL9 99 aa8.76□□□□□ -1.01
HLA-F-220ENST00000434407 FSIP2Q5CZC0 6907 aa8.75□□□□□ -1.01
HLA-F-220ENST00000434407 CYSTM1Q9H1C7 97 aa8.74□□□□□ -1.01
HLA-F-220ENST00000434407 H7BZZ5 65 aa8.69□□□□□ -1.02
HLA-F-220ENST00000434407 KRTAP5-3Q6L8H2 238 aa8.68□□□□□ -1.02
HLA-F-220ENST00000434407 H3BS24 57 aa8.67□□□□□ -1.02
HLA-F-220ENST00000434407 S4R3F8 94 aa8.66□□□□□ -1.02
HLA-F-220ENST00000434407 USH2AO75445 5202 aa8.66□□□□□ -1.02
HLA-F-220ENST00000434407 LCA10Q71F78 164 aa8.62□□□□□ -1.03
HLA-F-220ENST00000434407 TMEM258P61165 79 aa8.61□□□□□ -1.03
HLA-F-220ENST00000434407 SPANXA2-OT1Q8N9U9 137 aa8.58□□□□□ -1.04
HLA-F-220ENST00000434407 CSAG1Q6PB30 78 aa8.57□□□□□ -1.04
HLA-F-220ENST00000434407 ATP5EP56381 51 aaPredicted RBP8.54□□□□□ -1.04
HLA-F-220ENST00000434407 SSPOA2VEC9 5147 aa8.53□□□□□ -1.04
HLA-F-220ENST00000434407 A8MUN3 132 aa8.5□□□□□ -1.05
HLA-F-220ENST00000434407 DMAC1Q96GE9 116 aa8.42□□□□□ -1.06
HLA-F-220ENST00000434407 ACYP2P14621 99 aa8.41□□□□□ -1.06
HLA-F-220ENST00000434407 SERP1Q9Y6X1 66 aa8.36□□□□□ -1.07
HLA-F-220ENST00000434407 H0YAA0 97 aa8.32□□□□□ -1.08
HLA-F-220ENST00000434407 FCGBPQ9Y6R7 5405 aaPredicted RBP8.32□□□□□ -1.08
HLA-F-220ENST00000434407 RPS28P62857 69 aaKnown RBP8.31□□□□□ -1.08
HLA-F-220ENST00000434407 COA5Q86WW8 74 aa8.31□□□□□ -1.08
HLA-F-220ENST00000434407 SPRR2GQ9BYE4 73 aa8.31□□□□□ -1.08
HLA-F-220ENST00000434407 KRTAP19-6Q3LI70 58 aa8.3□□□□□ -1.08
HLA-F-220ENST00000434407 CHKB-CPT1BH3BT56 60 aa8.26□□□□□ -1.09
HLA-F-220ENST00000434407 KRTAP19-8Q3LI54 63 aa8.23□□□□□ -1.09
HLA-F-220ENST00000434407 CRIPTQ9P021 101 aa8.23□□□□□ -1.09
HLA-F-220ENST00000434407 MT1BP07438 61 aa8.18□□□□□ -1.1
HLA-F-220ENST00000434407 ADM2Q7Z4H4 148 aa8.16□□□□□ -1.1
HLA-F-220ENST00000434407 SMIM26A0A096LP01 95 aa8.14□□□□□ -1.11
HLA-F-220ENST00000434407 Q5VV11 94 aa8.14□□□□□ -1.11
HLA-F-220ENST00000434407 SPTSSBQ8NFR3 76 aa8.14□□□□□ -1.11
HLA-F-220ENST00000434407 P0C880 135 aa8.04□□□□□ -1.12
HLA-F-220ENST00000434407 V9GYY9 64 aa8.01□□□□□ -1.13
HLA-F-220ENST00000434407 Q1T7F1 81 aa7.99□□□□□ -1.13
HLA-F-220ENST00000434407 LINC01558Q9Y6Z2 57 aa7.97□□□□□ -1.13
HLA-F-220ENST00000434407 A6NN06 94 aa7.94□□□□□ -1.14
HLA-F-220ENST00000434407 KRTAP10-5P60370 271 aa7.94□□□□□ -1.14
HLA-F-220ENST00000434407 R4GN34 69 aa7.93□□□□□ -1.14
HLA-F-220ENST00000434407 SEC61GP60059 68 aa7.9□□□□□ -1.14
HLA-F-220ENST00000434407 MACF1Q9UPN3 7388 aaKnown RBP7.89□□□□□ -1.15
HLA-F-220ENST00000434407 A0A1B0GU69 56 aa7.88□□□□□ -1.15
HLA-F-220ENST00000434407 M0QZ58 72 aa7.87□□□□□ -1.15
HLA-F-220ENST00000434407 PRR15LQ9BU68 103 aa7.87□□□□□ -1.15
HLA-F-220ENST00000434407 PSPHP1O15172 72 aa7.84□□□□□ -1.15
HLA-F-220ENST00000434407 PLAC4Q8WY50 150 aa7.77□□□□□ -1.17
HLA-F-220ENST00000434407 SYNE2Q8WXH0 6885 aaKnown RBP7.74□□□□□ -1.17
HLA-F-220ENST00000434407 MT1XP80297 61 aa7.73□□□□□ -1.17
HLA-F-220ENST00000434407 KRTAP6-3Q3LI67 103 aa7.72□□□□□ -1.17
HLA-F-220ENST00000434407 LINC01554Q52M75 96 aa7.72□□□□□ -1.17
HLA-F-220ENST00000434407 PRO2289Q9P1D8 64 aa7.69□□□□□ -1.18
HLA-F-220ENST00000434407 A0A1B0GU33 70 aa7.68□□□□□ -1.18
HLA-F-220ENST00000434407 UQCR11O14957 56 aa7.63□□□□□ -1.19
HLA-F-220ENST00000434407 A6NED7 52 aa7.62□□□□□ -1.19
HLA-F-220ENST00000434407 KRTAP13-4Q3LI77 160 aa7.62□□□□□ -1.19
HLA-F-220ENST00000434407 MIR22HGQ0VDD5 57 aa7.54□□□□□ -1.2
HLA-F-220ENST00000434407 SPATA8Q6RVD6 105 aa7.52□□□□□ -1.21
HLA-F-220ENST00000434407 KRTAP12-2P59991 146 aa7.51□□□□□ -1.21
HLA-F-220ENST00000434407 KRTAP5-9P26371 169 aa7.49□□□□□ -1.21
HLA-F-220ENST00000434407 KMT2DO14686 5537 aa7.47□□□□□ -1.21
HLA-F-220ENST00000434407 CDC42SE1Q9NRR8 79 aa7.46□□□□□ -1.22
HLA-F-220ENST00000434407 BRK1Q8WUW1 75 aa7.45□□□□□ -1.22
HLA-F-220ENST00000434407 MUC12Q9UKN1 5478 aa7.43□□□□□ -1.22
HLA-F-220ENST00000434407 A8MU10 97 aa7.39□□□□□ -1.23
HLA-F-220ENST00000434407 A0A0D9SG42 100 aa7.38□□□□□ -1.23
HLA-F-220ENST00000434407 KRTAP10-7P60409 375 aaPredicted RBP7.36□□□□□ -1.23
HLA-F-220ENST00000434407 KRTAP10-12P60413 245 aa7.35□□□□□ -1.23
HLA-F-220ENST00000434407 CAMK2N1Q7Z7J9 78 aa7.3□□□□□ -1.24
HLA-F-220ENST00000434407 KRTAP8-1Q8IUC2 63 aa7.3□□□□□ -1.24
HLA-F-220ENST00000434407 NEBP20929 6669 aa7.28□□□□□ -1.24
HLA-F-220ENST00000434407 MDN1Q9NU22 5596 aa7.28□□□□□ -1.24
HLA-F-220ENST00000434407 KRTAP12-1P59990 96 aa7.26□□□□□ -1.25
HLA-F-220ENST00000434407 K7ERS5 55 aa7.25□□□□□ -1.25
HLA-F-220ENST00000434407 SPRR2FQ96RM1 72 aa7.25□□□□□ -1.25
HLA-F-220ENST00000434407 SPINT4Q6UDR6 99 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms