RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 FCGBPQ9Y6R7 5405 aaPredicted RBP6.06□□□□□ -1.44
TRAPPC4-202ENST00000434101 MT-ATP8P03928 68 aa6.06□□□□□ -1.44
TRAPPC4-202ENST00000434101 KRTAP9-7A8MTY7 169 aa6.03□□□□□ -1.44
TRAPPC4-202ENST00000434101 IMUPQ9GZP8 106 aa6.02□□□□□ -1.45
TRAPPC4-202ENST00000434101 MP68P56378 58 aa6.01□□□□□ -1.45
TRAPPC4-202ENST00000434101 LINC00208Q96KT6 92 aa6.01□□□□□ -1.45
TRAPPC4-202ENST00000434101 KRTAP4-8Q9BYQ9 185 aa6.01□□□□□ -1.45
TRAPPC4-202ENST00000434101 SCGB1A1P11684 91 aa6□□□□□ -1.45
TRAPPC4-202ENST00000434101 OCR1Q9BZK8 76 aa6□□□□□ -1.45
TRAPPC4-202ENST00000434101 A8MUN3 132 aa5.99□□□□□ -1.45
TRAPPC4-202ENST00000434101 KLKP1Q107X0 134 aa5.98□□□□□ -1.45
TRAPPC4-202ENST00000434101 NDUFC1O43677 76 aa5.97□□□□□ -1.45
TRAPPC4-202ENST00000434101 SPRR2GQ9BYE4 73 aa5.96□□□□□ -1.46
TRAPPC4-202ENST00000434101 Q5VV11 94 aa5.94□□□□□ -1.46
TRAPPC4-202ENST00000434101 H3BPC8 53 aa5.93□□□□□ -1.46
TRAPPC4-202ENST00000434101 CRIPTQ9P021 101 aa5.93□□□□□ -1.46
TRAPPC4-202ENST00000434101 MACF1Q9UPN3 7388 aaKnown RBP5.93□□□□□ -1.46
TRAPPC4-202ENST00000434101 KRTAP19-8Q3LI54 63 aa5.91□□□□□ -1.46
TRAPPC4-202ENST00000434101 H0YAA0 97 aa5.89□□□□□ -1.47
TRAPPC4-202ENST00000434101 MT1BP07438 61 aa5.89□□□□□ -1.47
TRAPPC4-202ENST00000434101 ANAPC13Q9BS18 74 aa5.88□□□□□ -1.47
TRAPPC4-202ENST00000434101 PCP4P48539 62 aa5.87□□□□□ -1.47
TRAPPC4-202ENST00000434101 A6NN06 94 aa5.85□□□□□ -1.47
TRAPPC4-202ENST00000434101 SMIM20Q8N5G0 67 aa5.84□□□□□ -1.47
TRAPPC4-202ENST00000434101 ADM2Q7Z4H4 148 aa5.82□□□□□ -1.48
TRAPPC4-202ENST00000434101 SYNE2Q8WXH0 6885 aaKnown RBP5.81□□□□□ -1.48
TRAPPC4-202ENST00000434101 DMAC1Q96GE9 116 aa5.81□□□□□ -1.48
TRAPPC4-202ENST00000434101 KRTAP10-5P60370 271 aa5.77□□□□□ -1.49
TRAPPC4-202ENST00000434101 SERP2Q8N6R1 65 aa5.77□□□□□ -1.49
TRAPPC4-202ENST00000434101 TRAV7A0A075B6U4 112 aa5.76□□□□□ -1.49
TRAPPC4-202ENST00000434101 KRTAP6-3Q3LI67 103 aa5.76□□□□□ -1.49
TRAPPC4-202ENST00000434101 LCE3BQ5TA77 95 aa5.76□□□□□ -1.49
TRAPPC4-202ENST00000434101 KRTAP4-12Q9BQ66 201 aa5.75□□□□□ -1.49
TRAPPC4-202ENST00000434101 COX7CP15954 63 aa5.74□□□□□ -1.49
TRAPPC4-202ENST00000434101 C20orf197Q8N268 126 aa5.74□□□□□ -1.49
TRAPPC4-202ENST00000434101 ACYP2P14621 99 aa5.7□□□□□ -1.5
TRAPPC4-202ENST00000434101 R4GN34 69 aa5.69□□□□□ -1.5
TRAPPC4-202ENST00000434101 CCDC179H3BU77 68 aa5.68□□□□□ -1.5
TRAPPC4-202ENST00000434101 P0C880 135 aa5.67□□□□□ -1.5
TRAPPC4-202ENST00000434101 SPTSSBQ8NFR3 76 aa5.65□□□□□ -1.5
TRAPPC4-202ENST00000434101 PLAC4Q8WY50 150 aa5.64□□□□□ -1.51
TRAPPC4-202ENST00000434101 M0QZ58 72 aa5.63□□□□□ -1.51
TRAPPC4-202ENST00000434101 PRO2289Q9P1D8 64 aa5.62□□□□□ -1.51
TRAPPC4-202ENST00000434101 SNURFQ9Y675 71 aa5.61□□□□□ -1.51
TRAPPC4-202ENST00000434101 CHKB-CPT1BH3BT56 60 aa5.6□□□□□ -1.51
TRAPPC4-202ENST00000434101 KRTAP9-9Q9BYP9 154 aa5.6□□□□□ -1.51
TRAPPC4-202ENST00000434101 KRTAP9-4Q9BYQ2 154 aa5.6□□□□□ -1.51
TRAPPC4-202ENST00000434101 SPANXA2-OT1Q8N9U9 137 aa5.56□□□□□ -1.52
TRAPPC4-202ENST00000434101 LINC01554Q52M75 96 aa5.55□□□□□ -1.52
TRAPPC4-202ENST00000434101 MT1XP80297 61 aa5.54□□□□□ -1.52
TRAPPC4-202ENST00000434101 TMEM258P61165 79 aa5.53□□□□□ -1.52
TRAPPC4-202ENST00000434101 KRTAP4-8A0A0G2JLE6 195 aa5.51□□□□□ -1.53
TRAPPC4-202ENST00000434101 KRTAP5-9P26371 169 aa5.5□□□□□ -1.53
TRAPPC4-202ENST00000434101 H7BZZ5 65 aa5.49□□□□□ -1.53
TRAPPC4-202ENST00000434101 ATP5EP56381 51 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC4-202ENST00000434101 NEBP20929 6669 aa5.49□□□□□ -1.53
TRAPPC4-202ENST00000434101 CYSTM1Q9H1C7 97 aa5.48□□□□□ -1.53
TRAPPC4-202ENST00000434101 KRTAP12-2P59991 146 aa5.42□□□□□ -1.54
TRAPPC4-202ENST00000434101 MUC12Q9UKN1 5478 aa5.42□□□□□ -1.54
TRAPPC4-202ENST00000434101 COA5Q86WW8 74 aa5.39□□□□□ -1.55
TRAPPC4-202ENST00000434101 LCE1DQ5T752 114 aa5.38□□□□□ -1.55
TRAPPC4-202ENST00000434101 KRTAP8-1Q8IUC2 63 aa5.37□□□□□ -1.55
TRAPPC4-202ENST00000434101 SPRR2FQ96RM1 72 aa5.36□□□□□ -1.55
TRAPPC4-202ENST00000434101 SERP1Q9Y6X1 66 aa5.36□□□□□ -1.55
TRAPPC4-202ENST00000434101 KMT2DO14686 5537 aa5.35□□□□□ -1.55
TRAPPC4-202ENST00000434101 SEC61GP60059 68 aa5.33□□□□□ -1.56
TRAPPC4-202ENST00000434101 RPS28P62857 69 aaKnown RBP5.33□□□□□ -1.56
TRAPPC4-202ENST00000434101 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
TRAPPC4-202ENST00000434101 KRTAP20-1Q3LI63 56 aa5.31□□□□□ -1.56
TRAPPC4-202ENST00000434101 KRTAP13-4Q3LI77 160 aa5.3□□□□□ -1.56
TRAPPC4-202ENST00000434101 KRTAP10-7P60409 375 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC4-202ENST00000434101 SPRR2EP22531 72 aa5.27□□□□□ -1.57
TRAPPC4-202ENST00000434101 SPRR2BP35325 72 aa5.27□□□□□ -1.57
TRAPPC4-202ENST00000434101 SPRR2AP35326 72 aa5.27□□□□□ -1.57
TRAPPC4-202ENST00000434101 KRTAP10-12P60413 245 aa5.27□□□□□ -1.57
TRAPPC4-202ENST00000434101 CAMK2N1Q7Z7J9 78 aa5.25□□□□□ -1.57
TRAPPC4-202ENST00000434101 MDN1Q9NU22 5596 aa5.25□□□□□ -1.57
TRAPPC4-202ENST00000434101 SMIM26A0A096LP01 95 aa5.23□□□□□ -1.57
TRAPPC4-202ENST00000434101 KRTAP19-4Q3LI73 84 aa5.22□□□□□ -1.57
TRAPPC4-202ENST00000434101 KRTAP4-9Q9BYQ8 210 aa5.21□□□□□ -1.58
TRAPPC4-202ENST00000434101 A0A1B0GU33 70 aa5.19□□□□□ -1.58
TRAPPC4-202ENST00000434101 KRTAP2-3P0C7H8 128 aa5.19□□□□□ -1.58
TRAPPC4-202ENST00000434101 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
TRAPPC4-202ENST00000434101 LCE4AQ5TA78 99 aa5.19□□□□□ -1.58
TRAPPC4-202ENST00000434101 KRTAP2-4Q9BYR9 128 aa5.19□□□□□ -1.58
TRAPPC4-202ENST00000434101 A0A0D9SG42 100 aa5.18□□□□□ -1.58
TRAPPC4-202ENST00000434101 H3BS24 57 aa5.18□□□□□ -1.58
TRAPPC4-202ENST00000434101 V9GYY9 64 aa5.17□□□□□ -1.58
TRAPPC4-202ENST00000434101 SPATA8Q6RVD6 105 aa5.16□□□□□ -1.58
TRAPPC4-202ENST00000434101 A0A1B0GU69 56 aa5.13□□□□□ -1.59
TRAPPC4-202ENST00000434101 SPINT4Q6UDR6 99 aa5.11□□□□□ -1.59
TRAPPC4-202ENST00000434101 SPRR2DP22532 72 aa5.1□□□□□ -1.59
TRAPPC4-202ENST00000434101 Q1T7F1 81 aa5.09□□□□□ -1.59
TRAPPC4-202ENST00000434101 KRTAP4-2Q9BYR5 136 aa5.08□□□□□ -1.6
TRAPPC4-202ENST00000434101 PRR15LQ9BU68 103 aa5.07□□□□□ -1.6
TRAPPC4-202ENST00000434101 KRTAP12-1P59990 96 aa5.06□□□□□ -1.6
TRAPPC4-202ENST00000434101 LINC01558Q9Y6Z2 57 aa5.05□□□□□ -1.6
TRAPPC4-202ENST00000434101 KRTAP2-2Q9BYT5 123 aa5.03□□□□□ -1.6
TRAPPC4-202ENST00000434101 KRTAP2-1Q9BYU5 128 aa5.03□□□□□ -1.6
TRAPPC4-202ENST00000434101 PSPHP1O15172 72 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 271.4 ms