RNA–Protein interactions for RNA: ENST00000432827.1

LCNL1-202, Transcript of lipocalin like 1, humanhuman

TSL 2

Gene LCNL1, Length 1,631 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-202ENST00000432827 LPAP08519 4548 aa13.22□□□□□ -0.29
LCNL1-202ENST00000432827 RBM12B-AS1Q9P1G2 102 aa13.2□□□□□ -0.3
LCNL1-202ENST00000432827 HMCN2Q8NDA2 5059 aa13.2□□□□□ -0.3
LCNL1-202ENST00000432827 BRK1Q8WUW1 75 aa13.18□□□□□ -0.3
LCNL1-202ENST00000432827 H1FX-AS1Q4G0G2 97 aa13.15□□□□□ -0.3
LCNL1-202ENST00000432827 SEC61GP60059 68 aa13.12□□□□□ -0.31
LCNL1-202ENST00000432827 A6NED7 52 aa13.11□□□□□ -0.31
LCNL1-202ENST00000432827 S4R3F8 94 aa13.1□□□□□ -0.31
LCNL1-202ENST00000432827 PRO0628Q9UI54 55 aa13.1□□□□□ -0.31
LCNL1-202ENST00000432827 LCA10Q71F78 164 aa13.06□□□□□ -0.32
LCNL1-202ENST00000432827 KRTAP3-3Q9BYR6 98 aa13.04□□□□□ -0.32
LCNL1-202ENST00000432827 CDC42SE1Q9NRR8 79 aa12.97□□□□□ -0.33
LCNL1-202ENST00000432827 MUC17Q685J3 4493 aa12.95□□□□□ -0.34
LCNL1-202ENST00000432827 KRTAP4-1Q9BYQ7 146 aa12.94□□□□□ -0.34
LCNL1-202ENST00000432827 UQCR11O14957 56 aa12.92□□□□□ -0.34
LCNL1-202ENST00000432827 SPATA8Q6RVD6 105 aa12.82□□□□□ -0.36
LCNL1-202ENST00000432827 A8MU10 97 aa12.8□□□□□ -0.36
LCNL1-202ENST00000432827 CSAG1Q6PB30 78 aa12.8□□□□□ -0.36
LCNL1-202ENST00000432827 MIR22HGQ0VDD5 57 aa12.78□□□□□ -0.36
LCNL1-202ENST00000432827 A0A1B0GU33 70 aa12.76□□□□□ -0.37
LCNL1-202ENST00000432827 RNF213Q63HN8 5207 aa12.75□□□□□ -0.37
LCNL1-202ENST00000432827 KRTAP19-2Q3LHN2 52 aa12.7□□□□□ -0.38
LCNL1-202ENST00000432827 SVIPQ8NHG7 77 aa12.69□□□□□ -0.38
LCNL1-202ENST00000432827 KRTAP10-6P60371 365 aaPredicted RBP12.67□□□□□ -0.38
LCNL1-202ENST00000432827 KRTAP3-2Q9BYR7 98 aa12.66□□□□□ -0.38
LCNL1-202ENST00000432827 H0YAA0 97 aa12.59□□□□□ -0.39
LCNL1-202ENST00000432827 ADM2Q7Z4H4 148 aa12.55□□□□□ -0.4
LCNL1-202ENST00000432827 P0C880 135 aa12.49□□□□□ -0.41
LCNL1-202ENST00000432827 PMAIP1Q13794 54 aa12.49□□□□□ -0.41
LCNL1-202ENST00000432827 A6NN06 94 aa12.39□□□□□ -0.43
LCNL1-202ENST00000432827 KRTAP13-4Q3LI77 160 aa12.33□□□□□ -0.44
LCNL1-202ENST00000432827 M0QZ58 72 aa12.29□□□□□ -0.44
LCNL1-202ENST00000432827 FLGP20930 4061 aaPredicted RBP12.26□□□□□ -0.45
LCNL1-202ENST00000432827 LCE2CQ5TA81 110 aa12.26□□□□□ -0.45
LCNL1-202ENST00000432827 KRTAP9-2Q9BYQ4 174 aa12.22□□□□□ -0.45
LCNL1-202ENST00000432827 MUC2Q02817 5179 aa12.21□□□□□ -0.45
LCNL1-202ENST00000432827 K7ERS5 55 aa12.19□□□□□ -0.46
LCNL1-202ENST00000432827 A0A0D9SG42 100 aa12.12□□□□□ -0.47
LCNL1-202ENST00000432827 KTN1-AS1Q86SY8 53 aa12.08□□□□□ -0.48
LCNL1-202ENST00000432827 R4GN34 69 aa12.08□□□□□ -0.48
LCNL1-202ENST00000432827 KRTAP9-6A0A140TA67 174 aa12.04□□□□□ -0.48
LCNL1-202ENST00000432827 MT1HP80294 61 aa12□□□□□ -0.49
LCNL1-202ENST00000432827 LORP23490 312 aaPredicted RBP11.97□□□□□ -0.49
LCNL1-202ENST00000432827 CRIPTQ9P021 101 aa11.95□□□□□ -0.5
LCNL1-202ENST00000432827 FAT4Q6V0I7 4981 aa11.92□□□□□ -0.5
LCNL1-202ENST00000432827 KRTAP12-1P59990 96 aa11.92□□□□□ -0.5
LCNL1-202ENST00000432827 M0R2T5 61 aa11.91□□□□□ -0.5
LCNL1-202ENST00000432827 KRTAP12-2P59991 146 aa11.88□□□□□ -0.51
LCNL1-202ENST00000432827 SPINT4Q6UDR6 99 aa11.84□□□□□ -0.51
LCNL1-202ENST00000432827 LINC01554Q52M75 96 aa11.82□□□□□ -0.52
LCNL1-202ENST00000432827 LCE2AQ5TA79 106 aaPredicted RBP11.8□□□□□ -0.52
LCNL1-202ENST00000432827 ROMO1P60602 79 aa11.71□□□□□ -0.54
LCNL1-202ENST00000432827 MT2AP02795 61 aa11.6□□□□□ -0.55
LCNL1-202ENST00000432827 PRAC1Q96KF2 57 aa11.6□□□□□ -0.55
LCNL1-202ENST00000432827 KRTAP9-8Q9BYQ0 159 aa11.6□□□□□ -0.55
LCNL1-202ENST00000432827 SPRR2GQ9BYE4 73 aa11.57□□□□□ -0.56
LCNL1-202ENST00000432827 MT1FP04733 61 aa11.53□□□□□ -0.56
LCNL1-202ENST00000432827 KRTAP10-10P60014 251 aa11.53□□□□□ -0.56
LCNL1-202ENST00000432827 KRTAP19-1Q8IUB9 90 aa11.46□□□□□ -0.57
LCNL1-202ENST00000432827 FSIP2Q5CZC0 6907 aa11.41□□□□□ -0.58
LCNL1-202ENST00000432827 CRCT1Q9UGL9 99 aa11.38□□□□□ -0.59
LCNL1-202ENST00000432827 CAMK2N1Q7Z7J9 78 aa11.36□□□□□ -0.59
LCNL1-202ENST00000432827 KRTAP25-1Q3LHN0 102 aa11.35□□□□□ -0.59
LCNL1-202ENST00000432827 LCE2DQ5TA82 110 aaPredicted RBP11.31□□□□□ -0.6
LCNL1-202ENST00000432827 PLAC4Q8WY50 150 aa11.27□□□□□ -0.61
LCNL1-202ENST00000432827 C10orf95Q9H7T3 257 aa11.25□□□□□ -0.61
LCNL1-202ENST00000432827 KRTAP19-8Q3LI54 63 aa11.23□□□□□ -0.61
LCNL1-202ENST00000432827 KRTAP9-3Q9BYQ3 159 aa11.19□□□□□ -0.62
LCNL1-202ENST00000432827 MT1BP07438 61 aa11□□□□□ -0.65
LCNL1-202ENST00000432827 TNP1P09430 55 aa10.89□□□□□ -0.67
LCNL1-202ENST00000432827 PP632Q6XCG6 107 aa10.8□□□□□ -0.68
LCNL1-202ENST00000432827 LCE2BO14633 110 aa10.78□□□□□ -0.68
LCNL1-202ENST00000432827 KRTAP9-7A8MTY7 169 aa10.74□□□□□ -0.69
LCNL1-202ENST00000432827 KRTAP23-1A1A580 65 aa10.73□□□□□ -0.69
LCNL1-202ENST00000432827 KRTAP10-5P60370 271 aa10.71□□□□□ -0.69
LCNL1-202ENST00000432827 MT1XP80297 61 aa10.71□□□□□ -0.69
LCNL1-202ENST00000432827 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.68□□□□□ -0.7
LCNL1-202ENST00000432827 PRO2289Q9P1D8 64 aa10.63□□□□□ -0.71
LCNL1-202ENST00000432827 SSPOA2VEC9 5147 aa10.38□□□□□ -0.75
LCNL1-202ENST00000432827 LCE3AQ5TA76 89 aa10.32□□□□□ -0.76
LCNL1-202ENST00000432827 USH2AO75445 5202 aa10.32□□□□□ -0.76
LCNL1-202ENST00000432827 KRTAP10-12P60413 245 aa10.29□□□□□ -0.76
LCNL1-202ENST00000432827 KRTAP10-7P60409 375 aaPredicted RBP10.28□□□□□ -0.76
LCNL1-202ENST00000432827 FCGBPQ9Y6R7 5405 aaPredicted RBP10.21□□□□□ -0.77
LCNL1-202ENST00000432827 KRTAP8-1Q8IUC2 63 aa10.18□□□□□ -0.78
LCNL1-202ENST00000432827 KRTAP19-6Q3LI70 58 aa10.11□□□□□ -0.79
LCNL1-202ENST00000432827 KRTAP15-1Q3LI76 137 aa10.11□□□□□ -0.79
LCNL1-202ENST00000432827 MACF1Q9UPN3 7388 aaKnown RBP10.05□□□□□ -0.8
LCNL1-202ENST00000432827 SYNE2Q8WXH0 6885 aaKnown RBP10.04□□□□□ -0.8
LCNL1-202ENST00000432827 KRTAP12-3P60328 96 aa9.93□□□□□ -0.82
LCNL1-202ENST00000432827 KRTAP4-8A0A0G2JLE6 195 aa9.76□□□□□ -0.85
LCNL1-202ENST00000432827 KRTAP4-8Q9BYQ9 185 aa9.76□□□□□ -0.85
LCNL1-202ENST00000432827 KRTAP19-5Q3LI72 72 aa9.74□□□□□ -0.85
LCNL1-202ENST00000432827 SPRR5A0A1B0GTR4 108 aa9.67□□□□□ -0.86
LCNL1-202ENST00000432827 KRTAP6-3Q3LI67 103 aa9.64□□□□□ -0.87
LCNL1-202ENST00000432827 KRTAP19-7Q3SYF9 63 aa9.56□□□□□ -0.88
LCNL1-202ENST00000432827 NEBP20929 6669 aa9.5□□□□□ -0.89
LCNL1-202ENST00000432827 LUZP6Q538Z0 58 aa9.49□□□□□ -0.89
LCNL1-202ENST00000432827 KMT2DO14686 5537 aa9.46□□□□□ -0.9
LCNL1-202ENST00000432827 NDUFAF8A1L188 74 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms