RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 CSAG1Q6PB30 78 aa8.75□□□□□ -1.01
DDR1-236ENST00000431373 KRTAP9-3Q9BYQ3 159 aa8.74□□□□□ -1.01
DDR1-236ENST00000431373 A8MUN3 132 aa8.73□□□□□ -1.01
DDR1-236ENST00000431373 KRTAP3-3Q9BYR6 98 aa8.69□□□□□ -1.02
DDR1-236ENST00000431373 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.64□□□□□ -1.03
DDR1-236ENST00000431373 LCE2BO14633 110 aa8.63□□□□□ -1.03
DDR1-236ENST00000431373 NDUFC1O43677 76 aa8.61□□□□□ -1.03
DDR1-236ENST00000431373 DMAC1Q96GE9 116 aa8.58□□□□□ -1.04
DDR1-236ENST00000431373 SERP2Q8N6R1 65 aa8.56□□□□□ -1.04
DDR1-236ENST00000431373 USH2AO75445 5202 aa8.55□□□□□ -1.04
DDR1-236ENST00000431373 SNURFQ9Y675 71 aa8.53□□□□□ -1.04
DDR1-236ENST00000431373 C20orf197Q8N268 126 aa8.5□□□□□ -1.05
DDR1-236ENST00000431373 H0YAA0 97 aa8.46□□□□□ -1.06
DDR1-236ENST00000431373 ACYP2P14621 99 aa8.44□□□□□ -1.06
DDR1-236ENST00000431373 KRTAP19-1Q8IUB9 90 aa8.43□□□□□ -1.06
DDR1-236ENST00000431373 SSPOA2VEC9 5147 aa8.39□□□□□ -1.07
DDR1-236ENST00000431373 COX7CP15954 63 aa8.38□□□□□ -1.07
DDR1-236ENST00000431373 SPANXA2-OT1Q8N9U9 137 aa8.38□□□□□ -1.07
DDR1-236ENST00000431373 SPRR2GQ9BYE4 73 aa8.38□□□□□ -1.07
DDR1-236ENST00000431373 ADM2Q7Z4H4 148 aa8.37□□□□□ -1.07
DDR1-236ENST00000431373 CRIPTQ9P021 101 aa8.37□□□□□ -1.07
DDR1-236ENST00000431373 SPTSSBQ8NFR3 76 aa8.3□□□□□ -1.08
DDR1-236ENST00000431373 CHKB-CPT1BH3BT56 60 aa8.29□□□□□ -1.08
DDR1-236ENST00000431373 KRTAP19-6Q3LI70 58 aa8.29□□□□□ -1.08
DDR1-236ENST00000431373 KRTAP19-8Q3LI54 63 aa8.28□□□□□ -1.08
DDR1-236ENST00000431373 Q5VV11 94 aa8.27□□□□□ -1.09
DDR1-236ENST00000431373 SYNE2Q8WXH0 6885 aaKnown RBP8.25□□□□□ -1.09
DDR1-236ENST00000431373 ANAPC13Q9BS18 74 aa8.25□□□□□ -1.09
DDR1-236ENST00000431373 FCGBPQ9Y6R7 5405 aaPredicted RBP8.24□□□□□ -1.09
DDR1-236ENST00000431373 MT1BP07438 61 aa8.23□□□□□ -1.09
DDR1-236ENST00000431373 P0C880 135 aa8.22□□□□□ -1.09
DDR1-236ENST00000431373 H7BZZ5 65 aa8.19□□□□□ -1.1
DDR1-236ENST00000431373 KRTAP3-2Q9BYR7 98 aa8.19□□□□□ -1.1
DDR1-236ENST00000431373 CYSTM1Q9H1C7 97 aa8.18□□□□□ -1.1
DDR1-236ENST00000431373 MACF1Q9UPN3 7388 aaKnown RBP8.16□□□□□ -1.1
DDR1-236ENST00000431373 R4GN34 69 aa8.14□□□□□ -1.11
DDR1-236ENST00000431373 COA5Q86WW8 74 aa8.13□□□□□ -1.11
DDR1-236ENST00000431373 M0QZ58 72 aa8.09□□□□□ -1.11
DDR1-236ENST00000431373 CCDC179H3BU77 68 aa8.07□□□□□ -1.12
DDR1-236ENST00000431373 A6NN06 94 aa8.03□□□□□ -1.12
DDR1-236ENST00000431373 KRTAP10-5P60370 271 aa7.99□□□□□ -1.13
DDR1-236ENST00000431373 LINC01554Q52M75 96 aa7.95□□□□□ -1.14
DDR1-236ENST00000431373 PLAC4Q8WY50 150 aa7.95□□□□□ -1.14
DDR1-236ENST00000431373 ATP5EP56381 51 aaPredicted RBP7.9□□□□□ -1.14
DDR1-236ENST00000431373 SEC61GP60059 68 aa7.89□□□□□ -1.15
DDR1-236ENST00000431373 SERP1Q9Y6X1 66 aa7.86□□□□□ -1.15
DDR1-236ENST00000431373 PRO2289Q9P1D8 64 aa7.83□□□□□ -1.16
DDR1-236ENST00000431373 NEBP20929 6669 aa7.8□□□□□ -1.16
DDR1-236ENST00000431373 TMEM258P61165 79 aa7.8□□□□□ -1.16
DDR1-236ENST00000431373 KRTAP13-4Q3LI77 160 aa7.8□□□□□ -1.16
DDR1-236ENST00000431373 MT1XP80297 61 aa7.79□□□□□ -1.16
DDR1-236ENST00000431373 KRTAP6-3Q3LI67 103 aa7.78□□□□□ -1.16
DDR1-236ENST00000431373 A0A1B0GU33 70 aa7.71□□□□□ -1.18
DDR1-236ENST00000431373 A0A1B0GU69 56 aa7.71□□□□□ -1.18
DDR1-236ENST00000431373 SPATA8Q6RVD6 105 aa7.64□□□□□ -1.19
DDR1-236ENST00000431373 MUC12Q9UKN1 5478 aa7.61□□□□□ -1.19
DDR1-236ENST00000431373 KRTAP20-1Q3LI63 56 aa7.61□□□□□ -1.19
DDR1-236ENST00000431373 A0A0D9SG42 100 aa7.6□□□□□ -1.19
DDR1-236ENST00000431373 PRR15LQ9BU68 103 aa7.58□□□□□ -1.2
DDR1-236ENST00000431373 LINC01558Q9Y6Z2 57 aa7.57□□□□□ -1.2
DDR1-236ENST00000431373 KRTAP12-2P59991 146 aa7.56□□□□□ -1.2
DDR1-236ENST00000431373 CAMK2N1Q7Z7J9 78 aa7.54□□□□□ -1.2
DDR1-236ENST00000431373 SMIM26A0A096LP01 95 aa7.5□□□□□ -1.21
DDR1-236ENST00000431373 SPINT4Q6UDR6 99 aa7.48□□□□□ -1.21
DDR1-236ENST00000431373 KRTAP12-1P59990 96 aa7.46□□□□□ -1.22
DDR1-236ENST00000431373 KRTAP5-9P26371 169 aa7.45□□□□□ -1.22
DDR1-236ENST00000431373 KRTAP10-7P60409 375 aaPredicted RBP7.45□□□□□ -1.22
DDR1-236ENST00000431373 A8MU10 97 aa7.42□□□□□ -1.22
DDR1-236ENST00000431373 KRTAP10-12P60413 245 aa7.41□□□□□ -1.22
DDR1-236ENST00000431373 KMT2DO14686 5537 aa7.39□□□□□ -1.23
DDR1-236ENST00000431373 PCP4P48539 62 aa7.38□□□□□ -1.23
DDR1-236ENST00000431373 KRTAP8-1Q8IUC2 63 aa7.38□□□□□ -1.23
DDR1-236ENST00000431373 KRTAP4-8A0A0G2JLE6 195 aa7.35□□□□□ -1.23
DDR1-236ENST00000431373 KRTAP4-8Q9BYQ9 185 aa7.35□□□□□ -1.23
DDR1-236ENST00000431373 UQCR11O14957 56 aa7.33□□□□□ -1.24
DDR1-236ENST00000431373 V9GYY9 64 aa7.32□□□□□ -1.24
DDR1-236ENST00000431373 SPRR2FQ96RM1 72 aa7.3□□□□□ -1.24
DDR1-236ENST00000431373 MDN1Q9NU22 5596 aa7.29□□□□□ -1.24
DDR1-236ENST00000431373 Q1T7F1 81 aa7.28□□□□□ -1.24
DDR1-236ENST00000431373 PSPHP1O15172 72 aa7.22□□□□□ -1.25
DDR1-236ENST00000431373 MIR22HGQ0VDD5 57 aa7.19□□□□□ -1.26
DDR1-236ENST00000431373 KRTAP2-3P0C7H8 128 aa7.18□□□□□ -1.26
DDR1-236ENST00000431373 KRTAP2-4Q9BYR9 128 aa7.18□□□□□ -1.26
DDR1-236ENST00000431373 RPS28P62857 69 aaKnown RBP7.17□□□□□ -1.26
DDR1-236ENST00000431373 SPRR2EP22531 72 aa7.13□□□□□ -1.27
DDR1-236ENST00000431373 SPRR2BP35325 72 aa7.13□□□□□ -1.27
DDR1-236ENST00000431373 SPRR2AP35326 72 aa7.13□□□□□ -1.27
DDR1-236ENST00000431373 C10orf95Q9H7T3 257 aa7.1□□□□□ -1.27
DDR1-236ENST00000431373 LCE1AQ5T7P2 110 aa7.07□□□□□ -1.28
DDR1-236ENST00000431373 TNP1P09430 55 aa7.03□□□□□ -1.28
DDR1-236ENST00000431373 K7ERS5 55 aa7.01□□□□□ -1.29
DDR1-236ENST00000431373 A6NED7 52 aa7□□□□□ -1.29
DDR1-236ENST00000431373 GPR98Q8WXG9 6306 aa6.97□□□□□ -1.29
DDR1-236ENST00000431373 KRTAP19-7Q3SYF9 63 aa6.96□□□□□ -1.3
DDR1-236ENST00000431373 KRTAP2-2Q9BYT5 123 aa6.9□□□□□ -1.3
DDR1-236ENST00000431373 KRTAP2-1Q9BYU5 128 aa6.9□□□□□ -1.3
DDR1-236ENST00000431373 MT1EP04732 61 aa6.89□□□□□ -1.31
DDR1-236ENST00000431373 SPRR2DP22532 72 aa6.89□□□□□ -1.31
DDR1-236ENST00000431373 LCE3AQ5TA76 89 aa6.88□□□□□ -1.31
DDR1-236ENST00000431373 KRTAP19-5Q3LI72 72 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms