RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 KRTAP1-3Q8IUG1 177 aa2.52□□□□□ -2.01
PTPN4-203ENST00000430976 KRTAP19-1Q8IUB9 90 aa2.51□□□□□ -2.01
PTPN4-203ENST00000430976 FRAS1Q86XX4 4008 aa2.51□□□□□ -2.01
PTPN4-203ENST00000430976 KRTAP10-9P60411 292 aa2.51□□□□□ -2.01
PTPN4-203ENST00000430976 KRTAP12-1P59990 96 aa2.5□□□□□ -2.01
PTPN4-203ENST00000430976 SACSQ9NZJ4 4579 aa2.5□□□□□ -2.01
PTPN4-203ENST00000430976 H3BNG1 76 aa2.49□□□□□ -2.01
PTPN4-203ENST00000430976 PCLOQ9Y6V0 5065 aa2.48□□□□□ -2.01
PTPN4-203ENST00000430976 M0QZ58 72 aa2.48□□□□□ -2.01
PTPN4-203ENST00000430976 BIRC6Q9NR09 4857 aa2.48□□□□□ -2.01
PTPN4-203ENST00000430976 DNAH9Q9NYC9 4486 aa2.47□□□□□ -2.01
PTPN4-203ENST00000430976 KRTAP10-6P60371 365 aaPredicted RBP2.47□□□□□ -2.01
PTPN4-203ENST00000430976 KRTAP13-1Q8IUC0 172 aa2.47□□□□□ -2.01
PTPN4-203ENST00000430976 KRTAP1-1Q07627 177 aa2.46□□□□□ -2.02
PTPN4-203ENST00000430976 KRTAP1-5Q9BYS1 174 aa2.46□□□□□ -2.02
PTPN4-203ENST00000430976 DNAH6Q9C0G6 4158 aa2.44□□□□□ -2.02
PTPN4-203ENST00000430976 STARD9Q9P2P6 4700 aa2.43□□□□□ -2.02
PTPN4-203ENST00000430976 HERC2O95714 4834 aa2.42□□□□□ -2.02
PTPN4-203ENST00000430976 KRTAP10-11P60412 298 aa2.42□□□□□ -2.02
PTPN4-203ENST00000430976 SMR3AQ99954 134 aa2.42□□□□□ -2.02
PTPN4-203ENST00000430976 KRTAP9-2Q9BYQ4 174 aa2.41□□□□□ -2.02
PTPN4-203ENST00000430976 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.4□□□□□ -2.03
PTPN4-203ENST00000430976 KRTAP19-4Q3LI73 84 aa2.39□□□□□ -2.03
PTPN4-203ENST00000430976 KRTAP10-3P60369 221 aa2.38□□□□□ -2.03
PTPN4-203ENST00000430976 HUWE1Q7Z6Z7 4374 aaKnown RBP2.38□□□□□ -2.03
PTPN4-203ENST00000430976 RYR1P21817 5038 aa2.36□□□□□ -2.03
PTPN4-203ENST00000430976 TNP1P09430 55 aa2.36□□□□□ -2.03
PTPN4-203ENST00000430976 Q5VSD8 79 aa2.36□□□□□ -2.03
PTPN4-203ENST00000430976 KRTAP9-9Q9BYP9 154 aa2.36□□□□□ -2.03
PTPN4-203ENST00000430976 KRTAP9-4Q9BYQ2 154 aa2.36□□□□□ -2.03
PTPN4-203ENST00000430976 KMT2AQ03164 3969 aa2.35□□□□□ -2.03
PTPN4-203ENST00000430976 KRTAP9-6A0A140TA67 174 aa2.35□□□□□ -2.03
PTPN4-203ENST00000430976 FAT2Q9NYQ8 4349 aa2.34□□□□□ -2.03
PTPN4-203ENST00000430976 PLECQ15149 4684 aaKnown RBP2.34□□□□□ -2.03
PTPN4-203ENST00000430976 ABCA13Q86UQ4 5058 aa2.34□□□□□ -2.03
PTPN4-203ENST00000430976 PKD1P98161 4303 aa2.34□□□□□ -2.04
PTPN4-203ENST00000430976 DNAH10Q8IVF4 4471 aa2.32□□□□□ -2.04
PTPN4-203ENST00000430976 PKHD1P08F94 4074 aa2.32□□□□□ -2.04
PTPN4-203ENST00000430976 VPS13DQ5THJ4 4388 aa2.32□□□□□ -2.04
PTPN4-203ENST00000430976 KRTAP9-7A8MTY7 169 aa2.31□□□□□ -2.04
PTPN4-203ENST00000430976 KRTAP9-3Q9BYQ3 159 aa2.31□□□□□ -2.04
PTPN4-203ENST00000430976 DNAH2Q9P225 4427 aa2.31□□□□□ -2.04
PTPN4-203ENST00000430976 KRTAP10-2P60368 255 aa2.31□□□□□ -2.04
PTPN4-203ENST00000430976 VPS13BQ7Z7G8 4022 aa2.29□□□□□ -2.04
PTPN4-203ENST00000430976 DNAH17Q9UFH2 4485 aa2.28□□□□□ -2.04
PTPN4-203ENST00000430976 KRTAP10-1P60331 282 aa2.27□□□□□ -2.05
PTPN4-203ENST00000430976 PKHD1L1Q86WI1 4243 aa2.26□□□□□ -2.05
PTPN4-203ENST00000430976 DYNC1H1Q14204 4646 aaKnown RBP2.26□□□□□ -2.05
PTPN4-203ENST00000430976 FAT3Q8TDW7 4589 aa2.26□□□□□ -2.05
PTPN4-203ENST00000430976 MACF1Q9UPN3 7388 aaKnown RBP2.25□□□□□ -2.05
PTPN4-203ENST00000430976 HSPG2P98160 4391 aa2.25□□□□□ -2.05
PTPN4-203ENST00000430976 KIAA1109Q2LD37 5005 aa2.24□□□□□ -2.05
PTPN4-203ENST00000430976 M0R2T5 61 aa2.24□□□□□ -2.05
PTPN4-203ENST00000430976 DNAH11Q96DT5 4516 aa2.24□□□□□ -2.05
PTPN4-203ENST00000430976 HERC1Q15751 4861 aa2.24□□□□□ -2.05
PTPN4-203ENST00000430976 KRTAP4-8A0A0G2JLE6 195 aa2.23□□□□□ -2.05
PTPN4-203ENST00000430976 DNAH8Q96JB1 4490 aa2.23□□□□□ -2.05
PTPN4-203ENST00000430976 SPRR5A0A1B0GTR4 108 aa2.22□□□□□ -2.05
PTPN4-203ENST00000430976 SMR3BP02814 79 aaPredicted RBP2.21□□□□□ -2.06
PTPN4-203ENST00000430976 A0A1B0GVY2 172 aa2.2□□□□□ -2.06
PTPN4-203ENST00000430976 LCE4AQ5TA78 99 aa2.2□□□□□ -2.06
PTPN4-203ENST00000430976 APOBP04114 4563 aaKnown RBP2.19□□□□□ -2.06
PTPN4-203ENST00000430976 LCE3CQ5T5A8 94 aa2.19□□□□□ -2.06
PTPN4-203ENST00000430976 KRTAP4-9Q9BYQ8 210 aa2.19□□□□□ -2.06
PTPN4-203ENST00000430976 KRTAP4-7Q9BYR0 210 aa2.18□□□□□ -2.06
PTPN4-203ENST00000430976 KRTAP1-4P0C5Y4 121 aa2.17□□□□□ -2.06
PTPN4-203ENST00000430976 LCE5AQ5TCM9 118 aa2.17□□□□□ -2.06
PTPN4-203ENST00000430976 DNAH5Q8TE73 4624 aa2.16□□□□□ -2.06
PTPN4-203ENST00000430976 UBR4Q5T4S7 5183 aa2.16□□□□□ -2.06
PTPN4-203ENST00000430976 LCE1DQ5T752 114 aa2.16□□□□□ -2.06
PTPN4-203ENST00000430976 LCE1EQ5T753 118 aa2.13□□□□□ -2.07
PTPN4-203ENST00000430976 MYCBP2O75592 4640 aa2.13□□□□□ -2.07
PTPN4-203ENST00000430976 HMCN2Q8NDA2 5059 aa2.12□□□□□ -2.07
PTPN4-203ENST00000430976 LRP1BQ9NZR2 4599 aa2.12□□□□□ -2.07
PTPN4-203ENST00000430976 LCE3BQ5TA77 95 aa2.11□□□□□ -2.07
PTPN4-203ENST00000430976 TNXBP22105 4242 aa2.11□□□□□ -2.07
PTPN4-203ENST00000430976 KRTAP10-10P60014 251 aa2.11□□□□□ -2.07
PTPN4-203ENST00000430976 KRTAP4-2Q9BYR5 136 aa2.1□□□□□ -2.07
PTPN4-203ENST00000430976 LCE1FQ5T754 118 aa2.1□□□□□ -2.07
PTPN4-203ENST00000430976 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.07
PTPN4-203ENST00000430976 KRTAP4-11Q9BYQ6 195 aa2.09□□□□□ -2.08
PTPN4-203ENST00000430976 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.08
PTPN4-203ENST00000430976 LCE1AQ5T7P2 110 aa2.08□□□□□ -2.08
PTPN4-203ENST00000430976 KRTAP4-5Q9BYR2 181 aa2.07□□□□□ -2.08
PTPN4-203ENST00000430976 CRCT1Q9UGL9 99 aa2.06□□□□□ -2.08
PTPN4-203ENST00000430976 OBSCNQ5VST9 7968 aa2.05□□□□□ -2.08
PTPN4-203ENST00000430976 KRTAP2-2Q9BYT5 123 aa2.04□□□□□ -2.08
PTPN4-203ENST00000430976 RPS29P62273 56 aaKnown RBP2.03□□□□□ -2.08
PTPN4-203ENST00000430976 KRTAP10-5P60370 271 aa2.03□□□□□ -2.08
PTPN4-203ENST00000430976 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
PTPN4-203ENST00000430976 RNF213Q63HN8 5207 aa2.02□□□□□ -2.09
PTPN4-203ENST00000430976 FAT1Q14517 4588 aa2.02□□□□□ -2.09
PTPN4-203ENST00000430976 LCE3AQ5TA76 89 aa2.01□□□□□ -2.09
PTPN4-203ENST00000430976 SYNE2Q8WXH0 6885 aaKnown RBP2.01□□□□□ -2.09
PTPN4-203ENST00000430976 LRP1Q07954 4544 aaKnown RBP2□□□□□ -2.09
PTPN4-203ENST00000430976 FAT4Q6V0I7 4981 aa1.98□□□□□ -2.09
PTPN4-203ENST00000430976 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
PTPN4-203ENST00000430976 DSTQ03001 7570 aaKnown RBP1.97□□□□□ -2.09
PTPN4-203ENST00000430976 KRTAP12-4P60329 112 aa1.95□□□□□ -2.1
PTPN4-203ENST00000430976 KRTAP10-4P60372 401 aaPredicted RBP1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms