RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 Q5W150 140 aa6.43□□□□□ -1.38
PABPC1P11-201ENST00000428966 ACYP2P14621 99 aa6.42□□□□□ -1.38
PABPC1P11-201ENST00000428966 ATP11AUNQ6ZP68 121 aa6.42□□□□□ -1.38
PABPC1P11-201ENST00000428966 CDC42SE1Q9NRR8 79 aa6.41□□□□□ -1.38
PABPC1P11-201ENST00000428966 LCA10Q71F78 164 aa6.39□□□□□ -1.39
PABPC1P11-201ENST00000428966 A8MU10 97 aa6.37□□□□□ -1.39
PABPC1P11-201ENST00000428966 SPTSSBQ8NFR3 76 aa6.37□□□□□ -1.39
PABPC1P11-201ENST00000428966 DMAC1Q96GE9 116 aa6.37□□□□□ -1.39
PABPC1P11-201ENST00000428966 MUC17Q685J3 4493 aa6.35□□□□□ -1.39
PABPC1P11-201ENST00000428966 LOC100996750A0A140TA64 210 aa6.34□□□□□ -1.39
PABPC1P11-201ENST00000428966 IGKV2-30P06310 120 aa6.34□□□□□ -1.39
PABPC1P11-201ENST00000428966 KRTAP4-6Q9BYQ5 205 aa6.34□□□□□ -1.39
PABPC1P11-201ENST00000428966 KRTAP3-1Q9BYR8 98 aa6.33□□□□□ -1.4
PABPC1P11-201ENST00000428966 C9orf92A6NGG3 77 aa6.32□□□□□ -1.4
PABPC1P11-201ENST00000428966 KRTAP16-1A8MUX0 517 aa6.3□□□□□ -1.4
PABPC1P11-201ENST00000428966 KTN1-AS1Q86SY8 53 aa6.3□□□□□ -1.4
PABPC1P11-201ENST00000428966 SPINK7P58062 85 aa6.3□□□□□ -1.4
PABPC1P11-201ENST00000428966 SEC61GP60059 68 aa6.3□□□□□ -1.4
PABPC1P11-201ENST00000428966 A6NN06 94 aa6.28□□□□□ -1.4
PABPC1P11-201ENST00000428966 A0A1B0GU69 56 aa6.25□□□□□ -1.41
PABPC1P11-201ENST00000428966 FAT4Q6V0I7 4981 aa6.24□□□□□ -1.41
PABPC1P11-201ENST00000428966 SEC61BP60468 96 aaKnown RBP6.24□□□□□ -1.41
PABPC1P11-201ENST00000428966 KRTAP4-1Q9BYQ7 146 aa6.23□□□□□ -1.41
PABPC1P11-201ENST00000428966 IGKV2D-30A0A075B6S6 120 aa6.22□□□□□ -1.41
PABPC1P11-201ENST00000428966 C7orf65Q6ZTY9 151 aa6.21□□□□□ -1.42
PABPC1P11-201ENST00000428966 RPL37P61927 97 aaKnown RBP6.18□□□□□ -1.42
PABPC1P11-201ENST00000428966 UQCR11O14957 56 aa6.16□□□□□ -1.42
PABPC1P11-201ENST00000428966 SPATA8Q6RVD6 105 aa6.16□□□□□ -1.42
PABPC1P11-201ENST00000428966 MIR22HGQ0VDD5 57 aa6.12□□□□□ -1.43
PABPC1P11-201ENST00000428966 RBM12B-AS1Q9P1G2 102 aa6.12□□□□□ -1.43
PABPC1P11-201ENST00000428966 KRTAP19-1Q8IUB9 90 aa6.11□□□□□ -1.43
PABPC1P11-201ENST00000428966 C20orf166-AS1Q96NR2 134 aa6.1□□□□□ -1.43
PABPC1P11-201ENST00000428966 A8MUU9 505 aa6.08□□□□□ -1.44
PABPC1P11-201ENST00000428966 KRTAP19-2Q3LHN2 52 aa6.06□□□□□ -1.44
PABPC1P11-201ENST00000428966 KRTAP4-12Q9BQ66 201 aa6.06□□□□□ -1.44
PABPC1P11-201ENST00000428966 KRTAP4-8Q9BYQ9 185 aa6.06□□□□□ -1.44
PABPC1P11-201ENST00000428966 A0A0A0MQY5 61 aa5.94□□□□□ -1.46
PABPC1P11-201ENST00000428966 MT1HP80294 61 aa5.93□□□□□ -1.46
PABPC1P11-201ENST00000428966 PRAC1Q96KF2 57 aa5.92□□□□□ -1.46
PABPC1P11-201ENST00000428966 KRTAP9-2Q9BYQ4 174 aa5.91□□□□□ -1.46
PABPC1P11-201ENST00000428966 COX6B2Q6YFQ2 88 aa5.91□□□□□ -1.46
PABPC1P11-201ENST00000428966 FLGP20930 4061 aaPredicted RBP5.9□□□□□ -1.46
PABPC1P11-201ENST00000428966 A0A1B0GU33 70 aa5.89□□□□□ -1.47
PABPC1P11-201ENST00000428966 ADM2Q7Z4H4 148 aa5.89□□□□□ -1.47
PABPC1P11-201ENST00000428966 KRTAP9-6A0A140TA67 174 aa5.88□□□□□ -1.47
PABPC1P11-201ENST00000428966 KRTAP9-7A8MTY7 169 aa5.88□□□□□ -1.47
PABPC1P11-201ENST00000428966 H0YAA0 97 aa5.86□□□□□ -1.47
PABPC1P11-201ENST00000428966 H1FX-AS1Q4G0G2 97 aa5.86□□□□□ -1.47
PABPC1P11-201ENST00000428966 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.84□□□□□ -1.47
PABPC1P11-201ENST00000428966 LCE4AQ5TA78 99 aa5.84□□□□□ -1.47
PABPC1P11-201ENST00000428966 LINC01554Q52M75 96 aa5.84□□□□□ -1.48
PABPC1P11-201ENST00000428966 LCE3BQ5TA77 95 aa5.82□□□□□ -1.48
PABPC1P11-201ENST00000428966 M0R2T5 61 aa5.8□□□□□ -1.48
PABPC1P11-201ENST00000428966 CSAG1Q6PB30 78 aa5.79□□□□□ -1.48
PABPC1P11-201ENST00000428966 K7ERS5 55 aa5.79□□□□□ -1.48
PABPC1P11-201ENST00000428966 KRTAP10-6P60371 365 aaPredicted RBP5.79□□□□□ -1.48
PABPC1P11-201ENST00000428966 KRTAP15-1Q3LI76 137 aa5.73□□□□□ -1.49
PABPC1P11-201ENST00000428966 KRTAP25-1Q3LHN0 102 aa5.68□□□□□ -1.5
PABPC1P11-201ENST00000428966 FSIP2Q5CZC0 6907 aa5.68□□□□□ -1.5
PABPC1P11-201ENST00000428966 S4R3F8 94 aa5.67□□□□□ -1.5
PABPC1P11-201ENST00000428966 KRTAP9-8Q9BYQ0 159 aa5.65□□□□□ -1.51
PABPC1P11-201ENST00000428966 KRTAP9-4Q9BYQ2 154 aa5.65□□□□□ -1.51
PABPC1P11-201ENST00000428966 KRTAP9-3Q9BYQ3 159 aa5.65□□□□□ -1.51
PABPC1P11-201ENST00000428966 KRTAP9-9Q9BYP9 154 aa5.62□□□□□ -1.51
PABPC1P11-201ENST00000428966 ROMO1P60602 79 aa5.6□□□□□ -1.51
PABPC1P11-201ENST00000428966 MT2AP02795 61 aa5.57□□□□□ -1.52
PABPC1P11-201ENST00000428966 KRTAP13-4Q3LI77 160 aa5.55□□□□□ -1.52
PABPC1P11-201ENST00000428966 MT1FP04733 61 aa5.54□□□□□ -1.52
PABPC1P11-201ENST00000428966 A0A0D9SG42 100 aa5.53□□□□□ -1.52
PABPC1P11-201ENST00000428966 P0C880 135 aa5.5□□□□□ -1.53
PABPC1P11-201ENST00000428966 KRTAP10-10P60014 251 aa5.49□□□□□ -1.53
PABPC1P11-201ENST00000428966 USH2AO75445 5202 aa5.49□□□□□ -1.53
PABPC1P11-201ENST00000428966 LCE1DQ5T752 114 aa5.47□□□□□ -1.53
PABPC1P11-201ENST00000428966 LCE5AQ5TCM9 118 aa5.47□□□□□ -1.53
PABPC1P11-201ENST00000428966 CRIPTQ9P021 101 aa5.47□□□□□ -1.53
PABPC1P11-201ENST00000428966 CRCT1Q9UGL9 99 aa5.47□□□□□ -1.53
PABPC1P11-201ENST00000428966 M0QZ58 72 aa5.45□□□□□ -1.54
PABPC1P11-201ENST00000428966 KRTAP4-8A0A0G2JLE6 195 aa5.43□□□□□ -1.54
PABPC1P11-201ENST00000428966 KRTAP12-2P59991 146 aa5.4□□□□□ -1.54
PABPC1P11-201ENST00000428966 SSPOA2VEC9 5147 aa5.39□□□□□ -1.55
PABPC1P11-201ENST00000428966 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
PABPC1P11-201ENST00000428966 SPINT4Q6UDR6 99 aa5.38□□□□□ -1.55
PABPC1P11-201ENST00000428966 C10orf95Q9H7T3 257 aa5.29□□□□□ -1.56
PABPC1P11-201ENST00000428966 R4GN34 69 aa5.26□□□□□ -1.57
PABPC1P11-201ENST00000428966 FCGBPQ9Y6R7 5405 aaPredicted RBP5.24□□□□□ -1.57
PABPC1P11-201ENST00000428966 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
PABPC1P11-201ENST00000428966 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.57
PABPC1P11-201ENST00000428966 SPRR2GQ9BYE4 73 aa5.19□□□□□ -1.58
PABPC1P11-201ENST00000428966 KRTAP19-6Q3LI70 58 aa5.17□□□□□ -1.58
PABPC1P11-201ENST00000428966 MT1BP07438 61 aa5.13□□□□□ -1.59
PABPC1P11-201ENST00000428966 KRTAP19-8Q3LI54 63 aa5.13□□□□□ -1.59
PABPC1P11-201ENST00000428966 KRTAP4-11Q9BYQ6 195 aa5.13□□□□□ -1.59
PABPC1P11-201ENST00000428966 MACF1Q9UPN3 7388 aaKnown RBP5.09□□□□□ -1.59
PABPC1P11-201ENST00000428966 NDUFAF8A1L188 74 aa5.02□□□□□ -1.61
PABPC1P11-201ENST00000428966 PP632Q6XCG6 107 aa5.01□□□□□ -1.61
PABPC1P11-201ENST00000428966 SYNE2Q8WXH0 6885 aaKnown RBP5.01□□□□□ -1.61
PABPC1P11-201ENST00000428966 CAMK2N1Q7Z7J9 78 aa5□□□□□ -1.61
PABPC1P11-201ENST00000428966 PLAC4Q8WY50 150 aa4.96□□□□□ -1.62
PABPC1P11-201ENST00000428966 KRTAP10-5P60370 271 aa4.96□□□□□ -1.62
PABPC1P11-201ENST00000428966 KRTAP4-2Q9BYR5 136 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms