RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 HERC1Q15751 4861 aa8.48□□□□□ -1.05
TVP23C-203ENST00000428082 UQCR11O14957 56 aa8.46□□□□□ -1.05
TVP23C-203ENST00000428082 SPATA8Q6RVD6 105 aa8.45□□□□□ -1.06
TVP23C-203ENST00000428082 C9orf92A6NGG3 77 aa8.44□□□□□ -1.06
TVP23C-203ENST00000428082 SEC61GP60059 68 aa8.43□□□□□ -1.06
TVP23C-203ENST00000428082 MIR22HGQ0VDD5 57 aa8.41□□□□□ -1.06
TVP23C-203ENST00000428082 LPAP08519 4548 aa8.36□□□□□ -1.07
TVP23C-203ENST00000428082 TPRXLQ17RH7 258 aa8.35□□□□□ -1.07
TVP23C-203ENST00000428082 KRTAP3-3Q9BYR6 98 aa8.34□□□□□ -1.07
TVP23C-203ENST00000428082 KRTAP3-2Q9BYR7 98 aa8.34□□□□□ -1.07
TVP23C-203ENST00000428082 HMCN2Q8NDA2 5059 aa8.31□□□□□ -1.08
TVP23C-203ENST00000428082 XP32Q5T750 250 aa8.29□□□□□ -1.08
TVP23C-203ENST00000428082 LRP2P98164 4655 aa8.25□□□□□ -1.09
TVP23C-203ENST00000428082 COX6B2Q6YFQ2 88 aa8.25□□□□□ -1.09
TVP23C-203ENST00000428082 KRTAP3-1Q9BYR8 98 aa8.25□□□□□ -1.09
TVP23C-203ENST00000428082 RBM12B-AS1Q9P1G2 102 aa8.2□□□□□ -1.1
TVP23C-203ENST00000428082 RPL37P61927 97 aaKnown RBP8.19□□□□□ -1.1
TVP23C-203ENST00000428082 A0A1B0GU33 70 aa8.15□□□□□ -1.1
TVP23C-203ENST00000428082 H1FX-AS1Q4G0G2 97 aa8.12□□□□□ -1.11
TVP23C-203ENST00000428082 H0YAA0 97 aa8.07□□□□□ -1.12
TVP23C-203ENST00000428082 SEC61BP60468 96 aaKnown RBP8.06□□□□□ -1.12
TVP23C-203ENST00000428082 MUC17Q685J3 4493 aa8.04□□□□□ -1.12
TVP23C-203ENST00000428082 PRAC1Q96KF2 57 aa8.01□□□□□ -1.13
TVP23C-203ENST00000428082 UBR4Q5T4S7 5183 aa7.99□□□□□ -1.13
TVP23C-203ENST00000428082 K7ERS5 55 aa7.98□□□□□ -1.13
TVP23C-203ENST00000428082 ADM2Q7Z4H4 148 aa7.97□□□□□ -1.13
TVP23C-203ENST00000428082 KRTAP4-1Q9BYQ7 146 aa7.97□□□□□ -1.13
TVP23C-203ENST00000428082 S4R3F8 94 aa7.96□□□□□ -1.13
TVP23C-203ENST00000428082 MUC2Q02817 5179 aa7.9□□□□□ -1.14
TVP23C-203ENST00000428082 RNF213Q63HN8 5207 aa7.86□□□□□ -1.15
TVP23C-203ENST00000428082 CSAG1Q6PB30 78 aa7.86□□□□□ -1.15
TVP23C-203ENST00000428082 KRTAP10-6P60371 365 aaPredicted RBP7.85□□□□□ -1.15
TVP23C-203ENST00000428082 LINC01554Q52M75 96 aa7.85□□□□□ -1.15
TVP23C-203ENST00000428082 KRTAP25-1Q3LHN0 102 aa7.72□□□□□ -1.17
TVP23C-203ENST00000428082 ROMO1P60602 79 aa7.7□□□□□ -1.18
TVP23C-203ENST00000428082 KRTAP19-2Q3LHN2 52 aa7.7□□□□□ -1.18
TVP23C-203ENST00000428082 KRTAP13-4Q3LI77 160 aa7.7□□□□□ -1.18
TVP23C-203ENST00000428082 P0C880 135 aa7.67□□□□□ -1.18
TVP23C-203ENST00000428082 A0A0D9SG42 100 aa7.66□□□□□ -1.18
TVP23C-203ENST00000428082 M0QZ58 72 aa7.62□□□□□ -1.19
TVP23C-203ENST00000428082 LCE2CQ5TA81 110 aa7.62□□□□□ -1.19
TVP23C-203ENST00000428082 FAT4Q6V0I7 4981 aa7.57□□□□□ -1.2
TVP23C-203ENST00000428082 FLGP20930 4061 aaPredicted RBP7.53□□□□□ -1.2
TVP23C-203ENST00000428082 KRTAP12-2P59991 146 aa7.48□□□□□ -1.21
TVP23C-203ENST00000428082 KRTAP12-1P59990 96 aa7.47□□□□□ -1.21
TVP23C-203ENST00000428082 MT1HP80294 61 aa7.47□□□□□ -1.21
TVP23C-203ENST00000428082 SPINT4Q6UDR6 99 aa7.46□□□□□ -1.21
TVP23C-203ENST00000428082 CRIPTQ9P021 101 aa7.44□□□□□ -1.22
TVP23C-203ENST00000428082 R4GN34 69 aa7.38□□□□□ -1.23
TVP23C-203ENST00000428082 M0R2T5 61 aa7.37□□□□□ -1.23
TVP23C-203ENST00000428082 LCE2AQ5TA79 106 aaPredicted RBP7.36□□□□□ -1.23
TVP23C-203ENST00000428082 LCE2BO14633 110 aa7.29□□□□□ -1.24
TVP23C-203ENST00000428082 C10orf95Q9H7T3 257 aa7.24□□□□□ -1.25
TVP23C-203ENST00000428082 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
TVP23C-203ENST00000428082 KRTAP9-8Q9BYQ0 159 aa7.16□□□□□ -1.26
TVP23C-203ENST00000428082 MT2AP02795 61 aa7.12□□□□□ -1.27
TVP23C-203ENST00000428082 MT1FP04733 61 aa7.08□□□□□ -1.28
TVP23C-203ENST00000428082 KRTAP10-10P60014 251 aa7.05□□□□□ -1.28
TVP23C-203ENST00000428082 CAMK2N1Q7Z7J9 78 aa7□□□□□ -1.29
TVP23C-203ENST00000428082 KRTAP15-1Q3LI76 137 aa6.98□□□□□ -1.29
TVP23C-203ENST00000428082 H3BS24 57 aa6.95□□□□□ -1.3
TVP23C-203ENST00000428082 PP632Q6XCG6 107 aa6.95□□□□□ -1.3
TVP23C-203ENST00000428082 KRTAP9-3Q9BYQ3 159 aa6.91□□□□□ -1.3
TVP23C-203ENST00000428082 KRTAP19-1Q8IUB9 90 aa6.86□□□□□ -1.31
TVP23C-203ENST00000428082 SPRR2GQ9BYE4 73 aa6.84□□□□□ -1.32
TVP23C-203ENST00000428082 PLAC4Q8WY50 150 aa6.78□□□□□ -1.32
TVP23C-203ENST00000428082 KRTAP23-1A1A580 65 aa6.77□□□□□ -1.33
TVP23C-203ENST00000428082 TNP1P09430 55 aa6.77□□□□□ -1.33
TVP23C-203ENST00000428082 NDUFAF8A1L188 74 aa6.73□□□□□ -1.33
TVP23C-203ENST00000428082 KRTAP19-8Q3LI54 63 aa6.7□□□□□ -1.34
TVP23C-203ENST00000428082 USH2AO75445 5202 aa6.65□□□□□ -1.34
TVP23C-203ENST00000428082 MT1BP07438 61 aa6.64□□□□□ -1.35
TVP23C-203ENST00000428082 KRTAP9-2Q9BYQ4 174 aa6.64□□□□□ -1.35
TVP23C-203ENST00000428082 LOC100996750A0A140TA64 210 aa6.62□□□□□ -1.35
TVP23C-203ENST00000428082 KRTAP4-6Q9BYQ5 205 aa6.62□□□□□ -1.35
TVP23C-203ENST00000428082 FSIP2Q5CZC0 6907 aa6.54□□□□□ -1.36
TVP23C-203ENST00000428082 LUZP6Q538Z0 58 aa6.52□□□□□ -1.37
TVP23C-203ENST00000428082 SSPOA2VEC9 5147 aa6.48□□□□□ -1.37
TVP23C-203ENST00000428082 KRTAP19-6Q3LI70 58 aa6.4□□□□□ -1.39
TVP23C-203ENST00000428082 MT1XP80297 61 aa6.37□□□□□ -1.39
TVP23C-203ENST00000428082 CRCT1Q9UGL9 99 aa6.37□□□□□ -1.39
TVP23C-203ENST00000428082 KRTAP10-5P60370 271 aa6.36□□□□□ -1.39
TVP23C-203ENST00000428082 SPRR5A0A1B0GTR4 108 aa6.33□□□□□ -1.4
TVP23C-203ENST00000428082 LCE3AQ5TA76 89 aa6.3□□□□□ -1.4
TVP23C-203ENST00000428082 PRO2289Q9P1D8 64 aa6.3□□□□□ -1.4
TVP23C-203ENST00000428082 FCGBPQ9Y6R7 5405 aaPredicted RBP6.24□□□□□ -1.41
TVP23C-203ENST00000428082 KRTAP8-1Q8IUC2 63 aa6.23□□□□□ -1.41
TVP23C-203ENST00000428082 KRTAP9-6A0A140TA67 174 aa6.21□□□□□ -1.41
TVP23C-203ENST00000428082 KRTAP10-12P60413 245 aa6.15□□□□□ -1.43
TVP23C-203ENST00000428082 A0A0A0MQY5 61 aa6.14□□□□□ -1.43
TVP23C-203ENST00000428082 KRTAP10-7P60409 375 aaPredicted RBP6.11□□□□□ -1.43
TVP23C-203ENST00000428082 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
TVP23C-203ENST00000428082 KRTAP4-8Q9BYQ9 185 aa6.01□□□□□ -1.45
TVP23C-203ENST00000428082 KMT2DO14686 5537 aa5.98□□□□□ -1.45
TVP23C-203ENST00000428082 MACF1Q9UPN3 7388 aaKnown RBP5.96□□□□□ -1.46
TVP23C-203ENST00000428082 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.95□□□□□ -1.46
TVP23C-203ENST00000428082 KRTAP4-8A0A0G2JLE6 195 aa5.95□□□□□ -1.46
TVP23C-203ENST00000428082 SYNE2Q8WXH0 6885 aaKnown RBP5.81□□□□□ -1.48
TVP23C-203ENST00000428082 KRTAP19-5Q3LI72 72 aa5.78□□□□□ -1.48
TVP23C-203ENST00000428082 LCE3BQ5TA77 95 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms