RNA–Protein interactions for RNA: ENST00000427678.1

KDM3A-204, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-204ENST00000427678 SMIM20Q8N5G0 67 aa7□□□□□ -1.29
KDM3A-204ENST00000427678 A8MUN3 132 aa6.99□□□□□ -1.29
KDM3A-204ENST00000427678 FAM236AA0A1B0GUQ0 79 aa6.98□□□□□ -1.29
KDM3A-204ENST00000427678 FAM236BA0A1B0GV22 79 aa6.98□□□□□ -1.29
KDM3A-204ENST00000427678 TRAV7A0A075B6U4 112 aa6.95□□□□□ -1.3
KDM3A-204ENST00000427678 NDUFC1O43677 76 aa6.92□□□□□ -1.3
KDM3A-204ENST00000427678 USH2AO75445 5202 aa6.9□□□□□ -1.31
KDM3A-204ENST00000427678 DMAC1Q96GE9 116 aa6.84□□□□□ -1.31
KDM3A-204ENST00000427678 SERP2Q8N6R1 65 aa6.81□□□□□ -1.32
KDM3A-204ENST00000427678 H0YAA0 97 aa6.78□□□□□ -1.32
KDM3A-204ENST00000427678 SSPOA2VEC9 5147 aa6.78□□□□□ -1.32
KDM3A-204ENST00000427678 SNURFQ9Y675 71 aa6.77□□□□□ -1.33
KDM3A-204ENST00000427678 KRTAP19-1Q8IUB9 90 aa6.76□□□□□ -1.33
KDM3A-204ENST00000427678 ACYP2P14621 99 aa6.75□□□□□ -1.33
KDM3A-204ENST00000427678 C20orf197Q8N268 126 aa6.75□□□□□ -1.33
KDM3A-204ENST00000427678 CRIPTQ9P021 101 aa6.75□□□□□ -1.33
KDM3A-204ENST00000427678 SPRR2GQ9BYE4 73 aa6.73□□□□□ -1.33
KDM3A-204ENST00000427678 ADM2Q7Z4H4 148 aa6.71□□□□□ -1.34
KDM3A-204ENST00000427678 KRTAP19-6Q3LI70 58 aa6.67□□□□□ -1.34
KDM3A-204ENST00000427678 SPANXA2-OT1Q8N9U9 137 aa6.67□□□□□ -1.34
KDM3A-204ENST00000427678 COX7CP15954 63 aa6.64□□□□□ -1.35
KDM3A-204ENST00000427678 KRTAP19-8Q3LI54 63 aa6.64□□□□□ -1.35
KDM3A-204ENST00000427678 Q5VV11 94 aa6.64□□□□□ -1.35
KDM3A-204ENST00000427678 SPTSSBQ8NFR3 76 aa6.64□□□□□ -1.35
KDM3A-204ENST00000427678 CHKB-CPT1BH3BT56 60 aa6.63□□□□□ -1.35
KDM3A-204ENST00000427678 FCGBPQ9Y6R7 5405 aaPredicted RBP6.63□□□□□ -1.35
KDM3A-204ENST00000427678 MT1BP07438 61 aa6.59□□□□□ -1.35
KDM3A-204ENST00000427678 ANAPC13Q9BS18 74 aa6.59□□□□□ -1.35
KDM3A-204ENST00000427678 P0C880 135 aa6.55□□□□□ -1.36
KDM3A-204ENST00000427678 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.54□□□□□ -1.36
KDM3A-204ENST00000427678 R4GN34 69 aa6.53□□□□□ -1.36
KDM3A-204ENST00000427678 A6NN06 94 aa6.48□□□□□ -1.37
KDM3A-204ENST00000427678 H7BZZ5 65 aa6.48□□□□□ -1.37
KDM3A-204ENST00000427678 M0QZ58 72 aa6.48□□□□□ -1.37
KDM3A-204ENST00000427678 CCDC179H3BU77 68 aa6.47□□□□□ -1.37
KDM3A-204ENST00000427678 COA5Q86WW8 74 aa6.46□□□□□ -1.38
KDM3A-204ENST00000427678 CYSTM1Q9H1C7 97 aa6.46□□□□□ -1.38
KDM3A-204ENST00000427678 MACF1Q9UPN3 7388 aaKnown RBP6.45□□□□□ -1.38
KDM3A-204ENST00000427678 SYNE2Q8WXH0 6885 aaKnown RBP6.42□□□□□ -1.38
KDM3A-204ENST00000427678 PCP4P48539 62 aa6.42□□□□□ -1.38
KDM3A-204ENST00000427678 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
KDM3A-204ENST00000427678 KRTAP10-5P60370 271 aa6.41□□□□□ -1.38
KDM3A-204ENST00000427678 KRTAP9-7A8MTY7 169 aa6.4□□□□□ -1.38
KDM3A-204ENST00000427678 LINC01554Q52M75 96 aa6.38□□□□□ -1.39
KDM3A-204ENST00000427678 SEC61GP60059 68 aa6.33□□□□□ -1.4
KDM3A-204ENST00000427678 PRO2289Q9P1D8 64 aa6.32□□□□□ -1.4
KDM3A-204ENST00000427678 LOC100996750A0A140TA64 210 aa6.31□□□□□ -1.4
KDM3A-204ENST00000427678 KRTAP4-6Q9BYQ5 205 aa6.31□□□□□ -1.4
KDM3A-204ENST00000427678 SERP1Q9Y6X1 66 aa6.3□□□□□ -1.4
KDM3A-204ENST00000427678 ATP5EP56381 51 aaPredicted RBP6.25□□□□□ -1.41
KDM3A-204ENST00000427678 MT1XP80297 61 aa6.24□□□□□ -1.41
KDM3A-204ENST00000427678 KRTAP6-3Q3LI67 103 aa6.21□□□□□ -1.42
KDM3A-204ENST00000427678 TMEM258P61165 79 aa6.2□□□□□ -1.42
KDM3A-204ENST00000427678 KRTAP13-4Q3LI77 160 aa6.19□□□□□ -1.42
KDM3A-204ENST00000427678 A0A1B0GU33 70 aa6.17□□□□□ -1.42
KDM3A-204ENST00000427678 A0A1B0GU69 56 aa6.15□□□□□ -1.42
KDM3A-204ENST00000427678 SPATA8Q6RVD6 105 aa6.1□□□□□ -1.43
KDM3A-204ENST00000427678 A0A0D9SG42 100 aa6.08□□□□□ -1.44
KDM3A-204ENST00000427678 KRTAP12-2P59991 146 aa6.06□□□□□ -1.44
KDM3A-204ENST00000427678 CAMK2N1Q7Z7J9 78 aa6.06□□□□□ -1.44
KDM3A-204ENST00000427678 PRR15LQ9BU68 103 aa6.05□□□□□ -1.44
KDM3A-204ENST00000427678 LINC01558Q9Y6Z2 57 aa6.01□□□□□ -1.45
KDM3A-204ENST00000427678 NEBP20929 6669 aa6□□□□□ -1.45
KDM3A-204ENST00000427678 SMIM26A0A096LP01 95 aa6□□□□□ -1.45
KDM3A-204ENST00000427678 KRTAP5-9P26371 169 aa6□□□□□ -1.45
KDM3A-204ENST00000427678 SPINT4Q6UDR6 99 aa5.99□□□□□ -1.45
KDM3A-204ENST00000427678 KRTAP10-7P60409 375 aaPredicted RBP5.96□□□□□ -1.46
KDM3A-204ENST00000427678 KRTAP8-1Q8IUC2 63 aa5.95□□□□□ -1.46
KDM3A-204ENST00000427678 KMT2DO14686 5537 aa5.94□□□□□ -1.46
KDM3A-204ENST00000427678 KRTAP12-1P59990 96 aa5.94□□□□□ -1.46
KDM3A-204ENST00000427678 KRTAP10-12P60413 245 aa5.94□□□□□ -1.46
KDM3A-204ENST00000427678 KRTAP4-8A0A0G2JLE6 195 aa5.9□□□□□ -1.46
KDM3A-204ENST00000427678 A8MU10 97 aa5.9□□□□□ -1.46
KDM3A-204ENST00000427678 KRTAP4-8Q9BYQ9 185 aa5.9□□□□□ -1.46
KDM3A-204ENST00000427678 MUC12Q9UKN1 5478 aa5.89□□□□□ -1.47
KDM3A-204ENST00000427678 RPS28P62857 69 aaKnown RBP5.89□□□□□ -1.47
KDM3A-204ENST00000427678 SPRR2FQ96RM1 72 aa5.89□□□□□ -1.47
KDM3A-204ENST00000427678 UQCR11O14957 56 aa5.84□□□□□ -1.47
KDM3A-204ENST00000427678 V9GYY9 64 aa5.82□□□□□ -1.48
KDM3A-204ENST00000427678 MDN1Q9NU22 5596 aa5.77□□□□□ -1.49
KDM3A-204ENST00000427678 Q1T7F1 81 aa5.77□□□□□ -1.49
KDM3A-204ENST00000427678 SPRR2EP22531 72 aa5.75□□□□□ -1.49
KDM3A-204ENST00000427678 SPRR2BP35325 72 aa5.75□□□□□ -1.49
KDM3A-204ENST00000427678 SPRR2AP35326 72 aa5.75□□□□□ -1.49
KDM3A-204ENST00000427678 PSPHP1O15172 72 aa5.73□□□□□ -1.49
KDM3A-204ENST00000427678 MIR22HGQ0VDD5 57 aa5.72□□□□□ -1.49
KDM3A-204ENST00000427678 LCE1AQ5T7P2 110 aa5.69□□□□□ -1.5
KDM3A-204ENST00000427678 C10orf95Q9H7T3 257 aa5.66□□□□□ -1.5
KDM3A-204ENST00000427678 TNP1P09430 55 aa5.64□□□□□ -1.51
KDM3A-204ENST00000427678 KRTAP20-1Q3LI63 56 aa5.64□□□□□ -1.51
KDM3A-204ENST00000427678 K7ERS5 55 aa5.61□□□□□ -1.51
KDM3A-204ENST00000427678 KRTAP2-3P0C7H8 128 aa5.58□□□□□ -1.52
KDM3A-204ENST00000427678 KRTAP2-4Q9BYR9 128 aa5.58□□□□□ -1.52
KDM3A-204ENST00000427678 KRTAP19-7Q3SYF9 63 aa5.57□□□□□ -1.52
KDM3A-204ENST00000427678 A6NED7 52 aa5.56□□□□□ -1.52
KDM3A-204ENST00000427678 SPRR2DP22532 72 aa5.56□□□□□ -1.52
KDM3A-204ENST00000427678 LCE3BQ5TA77 95 aa5.53□□□□□ -1.52
KDM3A-204ENST00000427678 KRTAP4-12Q9BQ66 201 aa5.53□□□□□ -1.52
KDM3A-204ENST00000427678 MT1EP04732 61 aa5.52□□□□□ -1.53
KDM3A-204ENST00000427678 KRTAP19-5Q3LI72 72 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms