RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 PCP4P48539 62 aa4.36□□□□□ -1.71
SMARCAL1-206ENST00000427645 KLKP1Q107X0 134 aa4.36□□□□□ -1.71
SMARCAL1-206ENST00000427645 NDUFC1O43677 76 aa4.35□□□□□ -1.71
SMARCAL1-206ENST00000427645 IGKV2-30P06310 120 aa4.35□□□□□ -1.71
SMARCAL1-206ENST00000427645 PCOTHQ58A44 107 aa4.35□□□□□ -1.71
SMARCAL1-206ENST00000427645 C7orf65Q6ZTY9 151 aa4.35□□□□□ -1.71
SMARCAL1-206ENST00000427645 CYP4F30PQ9H0H9 118 aa4.35□□□□□ -1.71
SMARCAL1-206ENST00000427645 IGKV2D-30A0A075B6S6 120 aa4.33□□□□□ -1.72
SMARCAL1-206ENST00000427645 SPINK7P58062 85 aa4.33□□□□□ -1.72
SMARCAL1-206ENST00000427645 SNURFQ9Y675 71 aa4.33□□□□□ -1.72
SMARCAL1-206ENST00000427645 CCDC179H3BU77 68 aa4.32□□□□□ -1.72
SMARCAL1-206ENST00000427645 LCE5AQ5TCM9 118 aa4.32□□□□□ -1.72
SMARCAL1-206ENST00000427645 CRCT1Q9UGL9 99 aa4.32□□□□□ -1.72
SMARCAL1-206ENST00000427645 H7BZZ5 65 aa4.26□□□□□ -1.73
SMARCAL1-206ENST00000427645 HRES1P13985 223 aa4.26□□□□□ -1.73
SMARCAL1-206ENST00000427645 SPANXA2-OT1Q8N9U9 137 aa4.26□□□□□ -1.73
SMARCAL1-206ENST00000427645 KRTAP9-3Q9BYQ3 159 aa4.24□□□□□ -1.73
SMARCAL1-206ENST00000427645 RBM12B-AS1Q9P1G2 102 aa4.24□□□□□ -1.73
SMARCAL1-206ENST00000427645 KRTAP19-2Q3LHN2 52 aa4.23□□□□□ -1.73
SMARCAL1-206ENST00000427645 CYSTM1Q9H1C7 97 aa4.23□□□□□ -1.73
SMARCAL1-206ENST00000427645 A8MUN3 132 aa4.22□□□□□ -1.73
SMARCAL1-206ENST00000427645 ATP5EP56381 51 aaPredicted RBP4.22□□□□□ -1.73
SMARCAL1-206ENST00000427645 TMEM258P61165 79 aa4.22□□□□□ -1.73
SMARCAL1-206ENST00000427645 MT1HP80294 61 aa4.22□□□□□ -1.73
SMARCAL1-206ENST00000427645 C4orf26Q17RF5 130 aa4.22□□□□□ -1.73
SMARCAL1-206ENST00000427645 COX6B2Q6YFQ2 88 aa4.22□□□□□ -1.73
SMARCAL1-206ENST00000427645 MPLKIPQ8TAP9 179 aa4.2□□□□□ -1.74
SMARCAL1-206ENST00000427645 ACYP2P14621 99 aa4.19□□□□□ -1.74
SMARCAL1-206ENST00000427645 DMAC1Q96GE9 116 aa4.18□□□□□ -1.74
SMARCAL1-206ENST00000427645 FAM236DA0A1B0GTK5 79 aa4.17□□□□□ -1.74
SMARCAL1-206ENST00000427645 FAM236CP0DP71 79 aa4.17□□□□□ -1.74
SMARCAL1-206ENST00000427645 KRTAP15-1Q3LI76 137 aa4.17□□□□□ -1.74
SMARCAL1-206ENST00000427645 KRTAP10-6P60371 365 aaPredicted RBP4.16□□□□□ -1.74
SMARCAL1-206ENST00000427645 H1FX-AS1Q4G0G2 97 aa4.15□□□□□ -1.75
SMARCAL1-206ENST00000427645 A0A0A0MQY5 61 aa4.14□□□□□ -1.75
SMARCAL1-206ENST00000427645 M0R2T5 61 aa4.13□□□□□ -1.75
SMARCAL1-206ENST00000427645 FLGP20930 4061 aaPredicted RBP4.12□□□□□ -1.75
SMARCAL1-206ENST00000427645 USH2AO75445 5202 aa4.11□□□□□ -1.75
SMARCAL1-206ENST00000427645 CHKB-CPT1BH3BT56 60 aa4.1□□□□□ -1.75
SMARCAL1-206ENST00000427645 SPTSSBQ8NFR3 76 aa4.09□□□□□ -1.75
SMARCAL1-206ENST00000427645 SERP1Q9Y6X1 66 aa4.09□□□□□ -1.75
SMARCAL1-206ENST00000427645 COA5Q86WW8 74 aa4.08□□□□□ -1.76
SMARCAL1-206ENST00000427645 S4R3F8 94 aa4.08□□□□□ -1.76
SMARCAL1-206ENST00000427645 RPS28P62857 69 aaKnown RBP4.07□□□□□ -1.76
SMARCAL1-206ENST00000427645 SSPOA2VEC9 5147 aa4.06□□□□□ -1.76
SMARCAL1-206ENST00000427645 CSAG1Q6PB30 78 aa4.04□□□□□ -1.76
SMARCAL1-206ENST00000427645 LCA10Q71F78 164 aa4.04□□□□□ -1.76
SMARCAL1-206ENST00000427645 SMIM26A0A096LP01 95 aa3.99□□□□□ -1.77
SMARCAL1-206ENST00000427645 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
SMARCAL1-206ENST00000427645 KRTAP9-8Q9BYQ0 159 aa3.97□□□□□ -1.77
SMARCAL1-206ENST00000427645 V9GYY9 64 aa3.97□□□□□ -1.77
SMARCAL1-206ENST00000427645 SEC61GP60059 68 aa3.96□□□□□ -1.78
SMARCAL1-206ENST00000427645 H0YAA0 97 aa3.94□□□□□ -1.78
SMARCAL1-206ENST00000427645 Q1T7F1 81 aa3.93□□□□□ -1.78
SMARCAL1-206ENST00000427645 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
SMARCAL1-206ENST00000427645 PRR15LQ9BU68 103 aa3.92□□□□□ -1.78
SMARCAL1-206ENST00000427645 LINC01558Q9Y6Z2 57 aa3.92□□□□□ -1.78
SMARCAL1-206ENST00000427645 SYNE2Q8WXH0 6885 aaKnown RBP3.91□□□□□ -1.78
SMARCAL1-206ENST00000427645 MACF1Q9UPN3 7388 aaKnown RBP3.91□□□□□ -1.78
SMARCAL1-206ENST00000427645 A0A1B0GU69 56 aa3.9□□□□□ -1.79
SMARCAL1-206ENST00000427645 MT2AP02795 61 aa3.89□□□□□ -1.79
SMARCAL1-206ENST00000427645 ADM2Q7Z4H4 148 aa3.88□□□□□ -1.79
SMARCAL1-206ENST00000427645 MT1FP04733 61 aa3.87□□□□□ -1.79
SMARCAL1-206ENST00000427645 KRTAP10-10P60014 251 aa3.83□□□□□ -1.8
SMARCAL1-206ENST00000427645 CRIPTQ9P021 101 aa3.83□□□□□ -1.8
SMARCAL1-206ENST00000427645 A0A1B0GU33 70 aa3.82□□□□□ -1.8
SMARCAL1-206ENST00000427645 PSPHP1O15172 72 aa3.81□□□□□ -1.8
SMARCAL1-206ENST00000427645 P0C880 135 aa3.81□□□□□ -1.8
SMARCAL1-206ENST00000427645 M0QZ58 72 aa3.8□□□□□ -1.8
SMARCAL1-206ENST00000427645 UQCR11O14957 56 aa3.78□□□□□ -1.8
SMARCAL1-206ENST00000427645 Q5VV11 94 aa3.78□□□□□ -1.8
SMARCAL1-206ENST00000427645 R4GN34 69 aa3.77□□□□□ -1.81
SMARCAL1-206ENST00000427645 A6NED7 52 aa3.73□□□□□ -1.81
SMARCAL1-206ENST00000427645 KRTAP19-6Q3LI70 58 aa3.73□□□□□ -1.81
SMARCAL1-206ENST00000427645 MIR22HGQ0VDD5 57 aa3.71□□□□□ -1.82
SMARCAL1-206ENST00000427645 SPRR2GQ9BYE4 73 aa3.71□□□□□ -1.82
SMARCAL1-206ENST00000427645 SPATA8Q6RVD6 105 aa3.7□□□□□ -1.82
SMARCAL1-206ENST00000427645 KRTAP13-4Q3LI77 160 aa3.68□□□□□ -1.82
SMARCAL1-206ENST00000427645 KRTAP6-3Q3LI67 103 aa3.67□□□□□ -1.82
SMARCAL1-206ENST00000427645 NEBP20929 6669 aa3.67□□□□□ -1.82
SMARCAL1-206ENST00000427645 MUC12Q9UKN1 5478 aa3.66□□□□□ -1.82
SMARCAL1-206ENST00000427645 LINC01554Q52M75 96 aa3.66□□□□□ -1.82
SMARCAL1-206ENST00000427645 CDC42SE1Q9NRR8 79 aa3.66□□□□□ -1.82
SMARCAL1-206ENST00000427645 A6NN06 94 aa3.65□□□□□ -1.83
SMARCAL1-206ENST00000427645 A0A0D9SG42 100 aa3.63□□□□□ -1.83
SMARCAL1-206ENST00000427645 A8MU10 97 aa3.62□□□□□ -1.83
SMARCAL1-206ENST00000427645 K7ERS5 55 aa3.62□□□□□ -1.83
SMARCAL1-206ENST00000427645 KRTAP19-8Q3LI54 63 aa3.62□□□□□ -1.83
SMARCAL1-206ENST00000427645 PLAC4Q8WY50 150 aa3.61□□□□□ -1.83
SMARCAL1-206ENST00000427645 BRK1Q8WUW1 75 aa3.6□□□□□ -1.83
SMARCAL1-206ENST00000427645 SPINT4Q6UDR6 99 aa3.59□□□□□ -1.83
SMARCAL1-206ENST00000427645 KRTAP12-1P59990 96 aa3.58□□□□□ -1.84
SMARCAL1-206ENST00000427645 MT1BP07438 61 aa3.54□□□□□ -1.84
SMARCAL1-206ENST00000427645 KRTAP12-2P59991 146 aa3.54□□□□□ -1.84
SMARCAL1-206ENST00000427645 MDN1Q9NU22 5596 aa3.53□□□□□ -1.84
SMARCAL1-206ENST00000427645 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
SMARCAL1-206ENST00000427645 CAMK2N1Q7Z7J9 78 aa3.53□□□□□ -1.84
SMARCAL1-206ENST00000427645 KRTAP20-1Q3LI63 56 aa3.51□□□□□ -1.85
SMARCAL1-206ENST00000427645 KMT2DO14686 5537 aa3.5□□□□□ -1.85
SMARCAL1-206ENST00000427645 PRO0628Q9UI54 55 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 236.1 ms