RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 LCA10Q71F78 164 aa7.36□□□□□ -1.23
APOBEC3D-202ENST00000427494 CDC42SE1Q9NRR8 79 aa7.33□□□□□ -1.24
APOBEC3D-202ENST00000427494 MYCBP2O75592 4640 aa7.33□□□□□ -1.24
APOBEC3D-202ENST00000427494 COX6B2Q6YFQ2 88 aa7.32□□□□□ -1.24
APOBEC3D-202ENST00000427494 SPTSSBQ8NFR3 76 aa7.32□□□□□ -1.24
APOBEC3D-202ENST00000427494 KRTAP4-5Q9BYR2 181 aa7.31□□□□□ -1.24
APOBEC3D-202ENST00000427494 TPRXLQ17RH7 258 aa7.24□□□□□ -1.25
APOBEC3D-202ENST00000427494 UQCR11O14957 56 aa7.2□□□□□ -1.26
APOBEC3D-202ENST00000427494 PMAIP1Q13794 54 aa7.2□□□□□ -1.26
APOBEC3D-202ENST00000427494 MIR22HGQ0VDD5 57 aa7.17□□□□□ -1.26
APOBEC3D-202ENST00000427494 SPATA8Q6RVD6 105 aa7.17□□□□□ -1.26
APOBEC3D-202ENST00000427494 A6NN06 94 aa7.1□□□□□ -1.27
APOBEC3D-202ENST00000427494 S4R3F8 94 aa7.1□□□□□ -1.27
APOBEC3D-202ENST00000427494 ABCA13Q86UQ4 5058 aa7.06□□□□□ -1.28
APOBEC3D-202ENST00000427494 A0A1B0GU33 70 aa7.06□□□□□ -1.28
APOBEC3D-202ENST00000427494 H1FX-AS1Q4G0G2 97 aa7.05□□□□□ -1.28
APOBEC3D-202ENST00000427494 LPAP08519 4548 aa7.03□□□□□ -1.28
APOBEC3D-202ENST00000427494 RBM12B-AS1Q9P1G2 102 aa7.02□□□□□ -1.29
APOBEC3D-202ENST00000427494 LRP2P98164 4655 aa7.02□□□□□ -1.29
APOBEC3D-202ENST00000427494 H0YAA0 97 aa7.01□□□□□ -1.29
APOBEC3D-202ENST00000427494 SEC61BP60468 96 aaKnown RBP6.99□□□□□ -1.29
APOBEC3D-202ENST00000427494 KTN1-AS1Q86SY8 53 aa6.99□□□□□ -1.29
APOBEC3D-202ENST00000427494 KRTAP10-6P60371 365 aaPredicted RBP6.93□□□□□ -1.3
APOBEC3D-202ENST00000427494 HERC2O95714 4834 aa6.91□□□□□ -1.3
APOBEC3D-202ENST00000427494 BIRC6Q9NR09 4857 aa6.91□□□□□ -1.3
APOBEC3D-202ENST00000427494 CSAG1Q6PB30 78 aa6.87□□□□□ -1.31
APOBEC3D-202ENST00000427494 KRTAP4-1Q9BYQ7 146 aa6.86□□□□□ -1.31
APOBEC3D-202ENST00000427494 P0C880 135 aa6.85□□□□□ -1.31
APOBEC3D-202ENST00000427494 ADM2Q7Z4H4 148 aa6.84□□□□□ -1.31
APOBEC3D-202ENST00000427494 KRTAP13-4Q3LI77 160 aa6.82□□□□□ -1.32
APOBEC3D-202ENST00000427494 MUC17Q685J3 4493 aa6.79□□□□□ -1.32
APOBEC3D-202ENST00000427494 A0A0D9SG42 100 aa6.76□□□□□ -1.33
APOBEC3D-202ENST00000427494 K7ERS5 55 aa6.76□□□□□ -1.33
APOBEC3D-202ENST00000427494 PRAC1Q96KF2 57 aa6.76□□□□□ -1.33
APOBEC3D-202ENST00000427494 LOC100996750A0A140TA64 210 aa6.73□□□□□ -1.33
APOBEC3D-202ENST00000427494 KRTAP4-6Q9BYQ5 205 aa6.73□□□□□ -1.33
APOBEC3D-202ENST00000427494 KRTAP19-2Q3LHN2 52 aa6.69□□□□□ -1.34
APOBEC3D-202ENST00000427494 PCLOQ9Y6V0 5065 aa6.64□□□□□ -1.35
APOBEC3D-202ENST00000427494 M0QZ58 72 aa6.64□□□□□ -1.35
APOBEC3D-202ENST00000427494 KRTAP12-2P59991 146 aa6.58□□□□□ -1.36
APOBEC3D-202ENST00000427494 KRTAP12-1P59990 96 aa6.56□□□□□ -1.36
APOBEC3D-202ENST00000427494 SPINT4Q6UDR6 99 aa6.56□□□□□ -1.36
APOBEC3D-202ENST00000427494 R4GN34 69 aa6.55□□□□□ -1.36
APOBEC3D-202ENST00000427494 HERC1Q15751 4861 aa6.55□□□□□ -1.36
APOBEC3D-202ENST00000427494 ROMO1P60602 79 aa6.55□□□□□ -1.36
APOBEC3D-202ENST00000427494 HMCN2Q8NDA2 5059 aa6.53□□□□□ -1.36
APOBEC3D-202ENST00000427494 LINC01554Q52M75 96 aa6.51□□□□□ -1.37
APOBEC3D-202ENST00000427494 MUC2Q02817 5179 aa6.5□□□□□ -1.37
APOBEC3D-202ENST00000427494 KRTAP25-1Q3LHN0 102 aa6.47□□□□□ -1.37
APOBEC3D-202ENST00000427494 FLGP20930 4061 aaPredicted RBP6.47□□□□□ -1.37
APOBEC3D-202ENST00000427494 CRIPTQ9P021 101 aa6.45□□□□□ -1.38
APOBEC3D-202ENST00000427494 KRTAP19-1Q8IUB9 90 aa6.4□□□□□ -1.39
APOBEC3D-202ENST00000427494 KRTAP4-8Q9BYQ9 185 aa6.38□□□□□ -1.39
APOBEC3D-202ENST00000427494 A0A0A0MQY5 61 aa6.35□□□□□ -1.39
APOBEC3D-202ENST00000427494 KRTAP4-12Q9BQ66 201 aa6.32□□□□□ -1.4
APOBEC3D-202ENST00000427494 KRTAP9-2Q9BYQ4 174 aa6.3□□□□□ -1.4
APOBEC3D-202ENST00000427494 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.29□□□□□ -1.4
APOBEC3D-202ENST00000427494 C10orf95Q9H7T3 257 aa6.28□□□□□ -1.4
APOBEC3D-202ENST00000427494 RNF213Q63HN8 5207 aa6.28□□□□□ -1.4
APOBEC3D-202ENST00000427494 M0R2T5 61 aa6.27□□□□□ -1.4
APOBEC3D-202ENST00000427494 MT1HP80294 61 aa6.27□□□□□ -1.41
APOBEC3D-202ENST00000427494 KRTAP19-4Q3LI73 84 aa6.27□□□□□ -1.41
APOBEC3D-202ENST00000427494 KRTAP9-6A0A140TA67 174 aa6.26□□□□□ -1.41
APOBEC3D-202ENST00000427494 UBR4Q5T4S7 5183 aa6.24□□□□□ -1.41
APOBEC3D-202ENST00000427494 KRTAP23-1A1A580 65 aa6.21□□□□□ -1.42
APOBEC3D-202ENST00000427494 CAMK2N1Q7Z7J9 78 aa6.19□□□□□ -1.42
APOBEC3D-202ENST00000427494 LCE4AQ5TA78 99 aa6.18□□□□□ -1.42
APOBEC3D-202ENST00000427494 FAT4Q6V0I7 4981 aa6.16□□□□□ -1.42
APOBEC3D-202ENST00000427494 KRTAP9-7A8MTY7 169 aa6.12□□□□□ -1.43
APOBEC3D-202ENST00000427494 SPRR2GQ9BYE4 73 aa6.11□□□□□ -1.43
APOBEC3D-202ENST00000427494 MT2AP02795 61 aa6.1□□□□□ -1.43
APOBEC3D-202ENST00000427494 LCE3BQ5TA77 95 aa6.09□□□□□ -1.43
APOBEC3D-202ENST00000427494 MT1FP04733 61 aa6.09□□□□□ -1.43
APOBEC3D-202ENST00000427494 KRTAP10-10P60014 251 aa6.09□□□□□ -1.43
APOBEC3D-202ENST00000427494 KRTAP9-8Q9BYQ0 159 aa6.07□□□□□ -1.44
APOBEC3D-202ENST00000427494 PLAC4Q8WY50 150 aa6.02□□□□□ -1.45
APOBEC3D-202ENST00000427494 KRTAP9-9Q9BYP9 154 aa6□□□□□ -1.45
APOBEC3D-202ENST00000427494 KRTAP9-4Q9BYQ2 154 aa6□□□□□ -1.45
APOBEC3D-202ENST00000427494 TNP1P09430 55 aa5.92□□□□□ -1.46
APOBEC3D-202ENST00000427494 PP632Q6XCG6 107 aa5.9□□□□□ -1.46
APOBEC3D-202ENST00000427494 KRTAP19-8Q3LI54 63 aa5.89□□□□□ -1.47
APOBEC3D-202ENST00000427494 KRTAP9-3Q9BYQ3 159 aa5.84□□□□□ -1.48
APOBEC3D-202ENST00000427494 MT1BP07438 61 aa5.82□□□□□ -1.48
APOBEC3D-202ENST00000427494 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
APOBEC3D-202ENST00000427494 KRTAP4-8A0A0G2JLE6 195 aa5.75□□□□□ -1.49
APOBEC3D-202ENST00000427494 KRTAP10-5P60370 271 aa5.71□□□□□ -1.49
APOBEC3D-202ENST00000427494 MT1XP80297 61 aa5.71□□□□□ -1.49
APOBEC3D-202ENST00000427494 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
APOBEC3D-202ENST00000427494 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
APOBEC3D-202ENST00000427494 LCE5AQ5TCM9 118 aa5.61□□□□□ -1.51
APOBEC3D-202ENST00000427494 PRO2289Q9P1D8 64 aa5.58□□□□□ -1.52
APOBEC3D-202ENST00000427494 NDUFAF8A1L188 74 aa5.55□□□□□ -1.52
APOBEC3D-202ENST00000427494 KRTAP10-12P60413 245 aa5.54□□□□□ -1.52
APOBEC3D-202ENST00000427494 KRTAP10-7P60409 375 aaPredicted RBP5.53□□□□□ -1.52
APOBEC3D-202ENST00000427494 KRTAP4-7Q9BYR0 210 aa5.5□□□□□ -1.53
APOBEC3D-202ENST00000427494 KRTAP8-1Q8IUC2 63 aa5.49□□□□□ -1.53
APOBEC3D-202ENST00000427494 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
APOBEC3D-202ENST00000427494 LUZP6Q538Z0 58 aa5.43□□□□□ -1.54
APOBEC3D-202ENST00000427494 KRTAP12-3P60328 96 aa5.38□□□□□ -1.55
APOBEC3D-202ENST00000427494 KRTAP4-11Q9BYQ6 195 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms