RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 USH2AO75445 5202 aa10.93□□□□□ -0.66
PDGFA-205ENST00000426681 SMIM20Q8N5G0 67 aa10.89□□□□□ -0.67
PDGFA-205ENST00000426681 FAM236AA0A1B0GUQ0 79 aa10.88□□□□□ -0.67
PDGFA-205ENST00000426681 FAM236BA0A1B0GV22 79 aa10.88□□□□□ -0.67
PDGFA-205ENST00000426681 TRAV7A0A075B6U4 112 aa10.85□□□□□ -0.67
PDGFA-205ENST00000426681 NDUFC1O43677 76 aa10.79□□□□□ -0.68
PDGFA-205ENST00000426681 SSPOA2VEC9 5147 aa10.77□□□□□ -0.68
PDGFA-205ENST00000426681 DMAC1Q96GE9 116 aa10.72□□□□□ -0.69
PDGFA-205ENST00000426681 KRTAP19-1Q8IUB9 90 aa10.68□□□□□ -0.7
PDGFA-205ENST00000426681 H0YAA0 97 aa10.65□□□□□ -0.7
PDGFA-205ENST00000426681 SPRR2GQ9BYE4 73 aa10.62□□□□□ -0.71
PDGFA-205ENST00000426681 SERP2Q8N6R1 65 aa10.6□□□□□ -0.71
PDGFA-205ENST00000426681 KRTAP19-6Q3LI70 58 aa10.57□□□□□ -0.72
PDGFA-205ENST00000426681 CRIPTQ9P021 101 aa10.57□□□□□ -0.72
PDGFA-205ENST00000426681 SNURFQ9Y675 71 aa10.55□□□□□ -0.72
PDGFA-205ENST00000426681 ACYP2P14621 99 aa10.51□□□□□ -0.73
PDGFA-205ENST00000426681 KRTAP19-8Q3LI54 63 aa10.5□□□□□ -0.73
PDGFA-205ENST00000426681 FCGBPQ9Y6R7 5405 aaPredicted RBP10.49□□□□□ -0.73
PDGFA-205ENST00000426681 ADM2Q7Z4H4 148 aa10.49□□□□□ -0.73
PDGFA-205ENST00000426681 C20orf197Q8N268 126 aa10.49□□□□□ -0.73
PDGFA-205ENST00000426681 MT1BP07438 61 aa10.43□□□□□ -0.74
PDGFA-205ENST00000426681 Q5VV11 94 aa10.43□□□□□ -0.74
PDGFA-205ENST00000426681 SPANXA2-OT1Q8N9U9 137 aa10.43□□□□□ -0.74
PDGFA-205ENST00000426681 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.37□□□□□ -0.75
PDGFA-205ENST00000426681 COX7CP15954 63 aa10.35□□□□□ -0.75
PDGFA-205ENST00000426681 SPTSSBQ8NFR3 76 aa10.33□□□□□ -0.76
PDGFA-205ENST00000426681 P0C880 135 aa10.3□□□□□ -0.76
PDGFA-205ENST00000426681 KRTAP3-2Q9BYR7 98 aa10.3□□□□□ -0.76
PDGFA-205ENST00000426681 CHKB-CPT1BH3BT56 60 aa10.29□□□□□ -0.76
PDGFA-205ENST00000426681 R4GN34 69 aa10.2□□□□□ -0.78
PDGFA-205ENST00000426681 A6NN06 94 aa10.16□□□□□ -0.78
PDGFA-205ENST00000426681 KRTAP10-5P60370 271 aa10.14□□□□□ -0.79
PDGFA-205ENST00000426681 KRTAP9-7A8MTY7 169 aa10.13□□□□□ -0.79
PDGFA-205ENST00000426681 H7BZZ5 65 aa10.13□□□□□ -0.79
PDGFA-205ENST00000426681 ANAPC13Q9BS18 74 aa10.13□□□□□ -0.79
PDGFA-205ENST00000426681 MACF1Q9UPN3 7388 aaKnown RBP10.12□□□□□ -0.79
PDGFA-205ENST00000426681 M0QZ58 72 aa10.12□□□□□ -0.79
PDGFA-205ENST00000426681 CYSTM1Q9H1C7 97 aa10.12□□□□□ -0.79
PDGFA-205ENST00000426681 COA5Q86WW8 74 aa10.07□□□□□ -0.8
PDGFA-205ENST00000426681 PLAC4Q8WY50 150 aa10□□□□□ -0.81
PDGFA-205ENST00000426681 SYNE2Q8WXH0 6885 aaKnown RBP9.97□□□□□ -0.81
PDGFA-205ENST00000426681 LINC01554Q52M75 96 aa9.93□□□□□ -0.82
PDGFA-205ENST00000426681 CCDC179H3BU77 68 aa9.91□□□□□ -0.82
PDGFA-205ENST00000426681 PRO2289Q9P1D8 64 aa9.87□□□□□ -0.83
PDGFA-205ENST00000426681 MT1XP80297 61 aa9.86□□□□□ -0.83
PDGFA-205ENST00000426681 KRTAP6-3Q3LI67 103 aa9.83□□□□□ -0.84
PDGFA-205ENST00000426681 SEC61GP60059 68 aa9.78□□□□□ -0.84
PDGFA-205ENST00000426681 KRTAP13-4Q3LI77 160 aa9.75□□□□□ -0.85
PDGFA-205ENST00000426681 SERP1Q9Y6X1 66 aa9.75□□□□□ -0.85
PDGFA-205ENST00000426681 ATP5EP56381 51 aaPredicted RBP9.73□□□□□ -0.85
PDGFA-205ENST00000426681 A0A1B0GU33 70 aa9.6□□□□□ -0.87
PDGFA-205ENST00000426681 KRTAP12-2P59991 146 aa9.59□□□□□ -0.87
PDGFA-205ENST00000426681 TMEM258P61165 79 aa9.58□□□□□ -0.88
PDGFA-205ENST00000426681 A0A1B0GU69 56 aa9.56□□□□□ -0.88
PDGFA-205ENST00000426681 KRTAP5-9P26371 169 aa9.52□□□□□ -0.89
PDGFA-205ENST00000426681 SPATA8Q6RVD6 105 aa9.51□□□□□ -0.89
PDGFA-205ENST00000426681 A0A0D9SG42 100 aa9.45□□□□□ -0.9
PDGFA-205ENST00000426681 CAMK2N1Q7Z7J9 78 aa9.41□□□□□ -0.9
PDGFA-205ENST00000426681 KRTAP10-7P60409 375 aaPredicted RBP9.4□□□□□ -0.9
PDGFA-205ENST00000426681 KRTAP10-12P60413 245 aa9.39□□□□□ -0.91
PDGFA-205ENST00000426681 KMT2DO14686 5537 aa9.39□□□□□ -0.91
PDGFA-205ENST00000426681 PRR15LQ9BU68 103 aa9.37□□□□□ -0.91
PDGFA-205ENST00000426681 LINC01558Q9Y6Z2 57 aa9.37□□□□□ -0.91
PDGFA-205ENST00000426681 NEBP20929 6669 aa9.37□□□□□ -0.91
PDGFA-205ENST00000426681 KRTAP8-1Q8IUC2 63 aa9.35□□□□□ -0.91
PDGFA-205ENST00000426681 SMIM26A0A096LP01 95 aa9.33□□□□□ -0.92
PDGFA-205ENST00000426681 MUC12Q9UKN1 5478 aa9.33□□□□□ -0.92
PDGFA-205ENST00000426681 KRTAP12-1P59990 96 aa9.32□□□□□ -0.92
PDGFA-205ENST00000426681 KRTAP4-8A0A0G2JLE6 195 aa9.31□□□□□ -0.92
PDGFA-205ENST00000426681 KRTAP4-8Q9BYQ9 185 aa9.31□□□□□ -0.92
PDGFA-205ENST00000426681 SPINT4Q6UDR6 99 aa9.3□□□□□ -0.92
PDGFA-205ENST00000426681 SPRR2FQ96RM1 72 aa9.27□□□□□ -0.93
PDGFA-205ENST00000426681 A8MU10 97 aa9.22□□□□□ -0.93
PDGFA-205ENST00000426681 MDN1Q9NU22 5596 aa9.11□□□□□ -0.95
PDGFA-205ENST00000426681 UQCR11O14957 56 aa9.07□□□□□ -0.96
PDGFA-205ENST00000426681 SPRR2EP22531 72 aa9.05□□□□□ -0.96
PDGFA-205ENST00000426681 SPRR2BP35325 72 aa9.05□□□□□ -0.96
PDGFA-205ENST00000426681 SPRR2AP35326 72 aa9.05□□□□□ -0.96
PDGFA-205ENST00000426681 LCE1AQ5T7P2 110 aa9.02□□□□□ -0.97
PDGFA-205ENST00000426681 V9GYY9 64 aa9.02□□□□□ -0.97
PDGFA-205ENST00000426681 Q1T7F1 81 aa8.98□□□□□ -0.97
PDGFA-205ENST00000426681 PCP4P48539 62 aa8.95□□□□□ -0.98
PDGFA-205ENST00000426681 KRTAP20-1Q3LI63 56 aa8.91□□□□□ -0.98
PDGFA-205ENST00000426681 MIR22HGQ0VDD5 57 aa8.89□□□□□ -0.99
PDGFA-205ENST00000426681 PSPHP1O15172 72 aa8.88□□□□□ -0.99
PDGFA-205ENST00000426681 C10orf95Q9H7T3 257 aa8.88□□□□□ -0.99
PDGFA-205ENST00000426681 RPS28P62857 69 aaKnown RBP8.82□□□□□ -1
PDGFA-205ENST00000426681 KRTAP19-7Q3SYF9 63 aa8.81□□□□□ -1
PDGFA-205ENST00000426681 KRTAP2-3P0C7H8 128 aa8.8□□□□□ -1
PDGFA-205ENST00000426681 KRTAP2-4Q9BYR9 128 aa8.8□□□□□ -1
PDGFA-205ENST00000426681 TNP1P09430 55 aa8.79□□□□□ -1
PDGFA-205ENST00000426681 SPRR2DP22532 72 aa8.75□□□□□ -1.01
PDGFA-205ENST00000426681 MT1EP04732 61 aa8.72□□□□□ -1.01
PDGFA-205ENST00000426681 K7ERS5 55 aa8.66□□□□□ -1.02
PDGFA-205ENST00000426681 KRTAP19-5Q3LI72 72 aa8.66□□□□□ -1.02
PDGFA-205ENST00000426681 LCE3AQ5TA76 89 aa8.62□□□□□ -1.03
PDGFA-205ENST00000426681 A6NED7 52 aa8.6□□□□□ -1.03
PDGFA-205ENST00000426681 LCE5AQ5TCM9 118 aa8.58□□□□□ -1.04
PDGFA-205ENST00000426681 KRTAP19-3Q7Z4W3 81 aa8.57□□□□□ -1.04
PDGFA-205ENST00000426681 KRTAP2-2Q9BYT5 123 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 228.4 ms