RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 KRTAP16-1A8MUX0 517 aa1.56□□□□□ -2.16
LINC00407-201ENST00000426509 C8orf87E5RJ46 101 aa1.56□□□□□ -2.16
LINC00407-201ENST00000426509 SMR3BP02814 79 aaPredicted RBP1.56□□□□□ -2.16
LINC00407-201ENST00000426509 PCOTHQ58A44 107 aa1.56□□□□□ -2.16
LINC00407-201ENST00000426509 Q5W150 140 aa1.56□□□□□ -2.16
LINC00407-201ENST00000426509 SPINK6Q6UWN8 80 aa1.56□□□□□ -2.16
LINC00407-201ENST00000426509 FAT4Q6V0I7 4981 aa1.56□□□□□ -2.16
LINC00407-201ENST00000426509 PKHD1L1Q86WI1 4243 aa1.55□□□□□ -2.16
LINC00407-201ENST00000426509 NDUFS5O43920 106 aa1.55□□□□□ -2.16
LINC00407-201ENST00000426509 C1orf195Q5TG92 126 aa1.55□□□□□ -2.16
LINC00407-201ENST00000426509 COA5Q86WW8 74 aa1.55□□□□□ -2.16
LINC00407-201ENST00000426509 DMBT1Q9UGM3 2413 aaPredicted RBP1.54□□□□□ -2.16
LINC00407-201ENST00000426509 Q5VV11 94 aa1.54□□□□□ -2.16
LINC00407-201ENST00000426509 PRO0628Q9UI54 55 aa1.54□□□□□ -2.16
LINC00407-201ENST00000426509 DNAH8Q96JB1 4490 aa1.54□□□□□ -2.16
LINC00407-201ENST00000426509 LOC101927531A0A1B0GV80 90 aa1.53□□□□□ -2.16
LINC00407-201ENST00000426509 A8MUN3 132 aa1.53□□□□□ -2.16
LINC00407-201ENST00000426509 PSPHP1O15172 72 aa1.53□□□□□ -2.16
LINC00407-201ENST00000426509 HRES1P13985 223 aa1.53□□□□□ -2.16
LINC00407-201ENST00000426509 BRK1Q8WUW1 75 aa1.53□□□□□ -2.16
LINC00407-201ENST00000426509 CRCT1Q9UGL9 99 aa1.53□□□□□ -2.16
LINC00407-201ENST00000426509 V9GYY9 64 aa1.53□□□□□ -2.16
LINC00407-201ENST00000426509 TNXBP22105 4242 aa1.53□□□□□ -2.16
LINC00407-201ENST00000426509 LINC00313P59037 77 aa1.52□□□□□ -2.17
LINC00407-201ENST00000426509 KRTAP10-4P60372 401 aaPredicted RBP1.52□□□□□ -2.17
LINC00407-201ENST00000426509 PRAC1Q96KF2 57 aa1.52□□□□□ -2.17
LINC00407-201ENST00000426509 RETNLBQ9BQ08 111 aa1.52□□□□□ -2.17
LINC00407-201ENST00000426509 LIMD2Q9BT23 127 aa1.52□□□□□ -2.17
LINC00407-201ENST00000426509 PRR15LQ9BU68 103 aa1.52□□□□□ -2.17
LINC00407-201ENST00000426509 KRTAP4-4Q9BYR3 166 aa1.52□□□□□ -2.17
LINC00407-201ENST00000426509 LINC01558Q9Y6Z2 57 aa1.52□□□□□ -2.17
LINC00407-201ENST00000426509 FLG2Q5D862 2391 aaPredicted RBP1.52□□□□□ -2.17
LINC00407-201ENST00000426509 A8MU10 97 aa1.51□□□□□ -2.17
LINC00407-201ENST00000426509 MT3P25713 68 aa1.51□□□□□ -2.17
LINC00407-201ENST00000426509 TYMSOSQ8TAI1 123 aa1.51□□□□□ -2.17
LINC00407-201ENST00000426509 DMAC1Q96GE9 116 aa1.51□□□□□ -2.17
LINC00407-201ENST00000426509 SRRM2Q9UQ35 2752 aaKnown RBP1.51□□□□□ -2.17
LINC00407-201ENST00000426509 LPAP08519 4548 aa1.5□□□□□ -2.17
LINC00407-201ENST00000426509 SPINK1P00995 79 aa1.5□□□□□ -2.17
LINC00407-201ENST00000426509 MT1HL1P0DM35 61 aa1.5□□□□□ -2.17
LINC00407-201ENST00000426509 RPS29P62273 56 aaKnown RBP1.5□□□□□ -2.17
LINC00407-201ENST00000426509 LCA10Q71F78 164 aa1.5□□□□□ -2.17
LINC00407-201ENST00000426509 LINC00304Q8N9R0 145 aa1.5□□□□□ -2.17
LINC00407-201ENST00000426509 CHKB-CPT1BH3BT56 60 aa1.49□□□□□ -2.17
LINC00407-201ENST00000426509 ACYP2P14621 99 aa1.49□□□□□ -2.17
LINC00407-201ENST00000426509 SPAG11AQ6PDA7 123 aa1.49□□□□□ -2.17
LINC00407-201ENST00000426509 A8MUU9 505 aa1.48□□□□□ -2.17
LINC00407-201ENST00000426509 SPINK7P58062 85 aa1.48□□□□□ -2.17
LINC00407-201ENST00000426509 C20orf166-AS1Q96NR2 134 aa1.48□□□□□ -2.17
LINC00407-201ENST00000426509 CDC42SE1Q9NRR8 79 aa1.48□□□□□ -2.17
LINC00407-201ENST00000426509 FSIP2Q5CZC0 6907 aa1.47□□□□□ -2.17
LINC00407-201ENST00000426509 A6NED7 52 aa1.47□□□□□ -2.17
LINC00407-201ENST00000426509 LCE1FQ5T754 118 aa1.47□□□□□ -2.17
LINC00407-201ENST00000426509 C9orf92A6NGG3 77 aa1.46□□□□□ -2.18
LINC00407-201ENST00000426509 A6NN06 94 aa1.46□□□□□ -2.18
LINC00407-201ENST00000426509 KRTAP10-5P60370 271 aa1.46□□□□□ -2.18
LINC00407-201ENST00000426509 C7orf65Q6ZTY9 151 aa1.46□□□□□ -2.18
LINC00407-201ENST00000426509 KRTAP10-8P60410 259 aa1.45□□□□□ -2.18
LINC00407-201ENST00000426509 ATP11AUNQ6ZP68 121 aa1.45□□□□□ -2.18
LINC00407-201ENST00000426509 A0A1B0GU69 56 aa1.44□□□□□ -2.18
LINC00407-201ENST00000426509 KRTAP10-12P60413 245 aa1.44□□□□□ -2.18
LINC00407-201ENST00000426509 PMAIP1Q13794 54 aa1.44□□□□□ -2.18
LINC00407-201ENST00000426509 SPATA8Q6RVD6 105 aa1.44□□□□□ -2.18
LINC00407-201ENST00000426509 SPTSSBQ8NFR3 76 aa1.44□□□□□ -2.18
LINC00407-201ENST00000426509 NDUFAF8A1L188 74 aa1.42□□□□□ -2.18
LINC00407-201ENST00000426509 COX6B2Q6YFQ2 88 aa1.42□□□□□ -2.18
LINC00407-201ENST00000426509 KTN1-AS1Q86SY8 53 aa1.42□□□□□ -2.18
LINC00407-201ENST00000426509 KRTAP9-6A8MVA2 160 aa1.41□□□□□ -2.18
LINC00407-201ENST00000426509 UQCR11O14957 56 aa1.41□□□□□ -2.18
LINC00407-201ENST00000426509 RPL37P61927 97 aaKnown RBP1.41□□□□□ -2.18
LINC00407-201ENST00000426509 MIR22HGQ0VDD5 57 aa1.41□□□□□ -2.18
LINC00407-201ENST00000426509 H0YAA0 97 aa1.4□□□□□ -2.19
LINC00407-201ENST00000426509 H1FX-AS1Q4G0G2 97 aa1.39□□□□□ -2.19
LINC00407-201ENST00000426509 RBM12B-AS1Q9P1G2 102 aa1.39□□□□□ -2.19
LINC00407-201ENST00000426509 MUC17Q685J3 4493 aa1.38□□□□□ -2.19
LINC00407-201ENST00000426509 SEC61GP60059 68 aa1.38□□□□□ -2.19
LINC00407-201ENST00000426509 ADM2Q7Z4H4 148 aa1.38□□□□□ -2.19
LINC00407-201ENST00000426509 A0A1B0GU33 70 aa1.37□□□□□ -2.19
LINC00407-201ENST00000426509 LCE3CQ5T5A8 94 aa1.37□□□□□ -2.19
LINC00407-201ENST00000426509 KRTAP13-4Q3LI77 160 aa1.36□□□□□ -2.19
LINC00407-201ENST00000426509 S4R3F8 94 aa1.36□□□□□ -2.19
LINC00407-201ENST00000426509 TPRXLQ17RH7 258 aa1.35□□□□□ -2.19
LINC00407-201ENST00000426509 P0C880 135 aa1.34□□□□□ -2.19
LINC00407-201ENST00000426509 KRTAP4-3Q9BYR4 195 aa1.34□□□□□ -2.19
LINC00407-201ENST00000426509 USH2AO75445 5202 aa1.34□□□□□ -2.2
LINC00407-201ENST00000426509 FCGBPQ9Y6R7 5405 aaPredicted RBP1.33□□□□□ -2.2
LINC00407-201ENST00000426509 SSPOA2VEC9 5147 aa1.33□□□□□ -2.2
LINC00407-201ENST00000426509 CSAG1Q6PB30 78 aa1.33□□□□□ -2.2
LINC00407-201ENST00000426509 KRTAP4-1Q9BYQ7 146 aa1.33□□□□□ -2.2
LINC00407-201ENST00000426509 KRTAP5-2Q701N4 177 aa1.32□□□□□ -2.2
LINC00407-201ENST00000426509 A0A0D9SG42 100 aa1.31□□□□□ -2.2
LINC00407-201ENST00000426509 KRTAP25-1Q3LHN0 102 aa1.31□□□□□ -2.2
LINC00407-201ENST00000426509 KRTAP19-2Q3LHN2 52 aa1.31□□□□□ -2.2
LINC00407-201ENST00000426509 LINC01554Q52M75 96 aa1.31□□□□□ -2.2
LINC00407-201ENST00000426509 MACF1Q9UPN3 7388 aaKnown RBP1.3□□□□□ -2.2
LINC00407-201ENST00000426509 SYNE2Q8WXH0 6885 aaKnown RBP1.3□□□□□ -2.2
LINC00407-201ENST00000426509 K7ERS5 55 aa1.3□□□□□ -2.2
LINC00407-201ENST00000426509 KRTAP12-1P59990 96 aa1.3□□□□□ -2.2
LINC00407-201ENST00000426509 KRTAP12-2P59991 146 aa1.3□□□□□ -2.2
LINC00407-201ENST00000426509 ROMO1P60602 79 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms