RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 RPS28P62857 69 aaKnown RBP7.77□□□□□ -1.17
SCRN1-205ENST00000425819 S4R3F8 94 aa7.76□□□□□ -1.17
SCRN1-205ENST00000425819 COA5Q86WW8 74 aa7.76□□□□□ -1.17
SCRN1-205ENST00000425819 LCA10Q71F78 164 aa7.73□□□□□ -1.17
SCRN1-205ENST00000425819 CHKB-CPT1BH3BT56 60 aa7.72□□□□□ -1.17
SCRN1-205ENST00000425819 MT1HP80294 61 aa7.69□□□□□ -1.18
SCRN1-205ENST00000425819 FAT4Q6V0I7 4981 aa7.66□□□□□ -1.18
SCRN1-205ENST00000425819 SERP1Q9Y6X1 66 aa7.65□□□□□ -1.18
SCRN1-205ENST00000425819 M0R2T5 61 aa7.63□□□□□ -1.19
SCRN1-205ENST00000425819 FLGP20930 4061 aaPredicted RBP7.61□□□□□ -1.19
SCRN1-205ENST00000425819 CSAG1Q6PB30 78 aa7.61□□□□□ -1.19
SCRN1-205ENST00000425819 SPTSSBQ8NFR3 76 aa7.59□□□□□ -1.19
SCRN1-205ENST00000425819 LCE2AQ5TA79 106 aaPredicted RBP7.52□□□□□ -1.21
SCRN1-205ENST00000425819 PRO0628Q9UI54 55 aa7.47□□□□□ -1.21
SCRN1-205ENST00000425819 KRTAP10-6P60371 365 aaPredicted RBP7.44□□□□□ -1.22
SCRN1-205ENST00000425819 SMIM26A0A096LP01 95 aa7.42□□□□□ -1.22
SCRN1-205ENST00000425819 ADM2Q7Z4H4 148 aa7.4□□□□□ -1.22
SCRN1-205ENST00000425819 LORP23490 312 aaPredicted RBP7.39□□□□□ -1.23
SCRN1-205ENST00000425819 H0YAA0 97 aa7.38□□□□□ -1.23
SCRN1-205ENST00000425819 KRTAP9-8Q9BYQ0 159 aa7.37□□□□□ -1.23
SCRN1-205ENST00000425819 LINC01558Q9Y6Z2 57 aa7.36□□□□□ -1.23
SCRN1-205ENST00000425819 SEC61GP60059 68 aa7.34□□□□□ -1.23
SCRN1-205ENST00000425819 A0A1B0GU69 56 aa7.33□□□□□ -1.24
SCRN1-205ENST00000425819 MT2AP02795 61 aa7.33□□□□□ -1.24
SCRN1-205ENST00000425819 P0C880 135 aa7.33□□□□□ -1.24
SCRN1-205ENST00000425819 Q1T7F1 81 aa7.32□□□□□ -1.24
SCRN1-205ENST00000425819 V9GYY9 64 aa7.3□□□□□ -1.24
SCRN1-205ENST00000425819 MT1FP04733 61 aa7.29□□□□□ -1.24
SCRN1-205ENST00000425819 KRTAP10-10P60014 251 aa7.28□□□□□ -1.24
SCRN1-205ENST00000425819 PRR15LQ9BU68 103 aa7.28□□□□□ -1.24
SCRN1-205ENST00000425819 PSPHP1O15172 72 aa7.25□□□□□ -1.25
SCRN1-205ENST00000425819 BRK1Q8WUW1 75 aa7.18□□□□□ -1.26
SCRN1-205ENST00000425819 A0A1B0GU33 70 aa7.17□□□□□ -1.26
SCRN1-205ENST00000425819 Q5VV11 94 aa7.16□□□□□ -1.26
SCRN1-205ENST00000425819 CRIPTQ9P021 101 aa7.15□□□□□ -1.27
SCRN1-205ENST00000425819 R4GN34 69 aa7.15□□□□□ -1.27
SCRN1-205ENST00000425819 M0QZ58 72 aa7.14□□□□□ -1.27
SCRN1-205ENST00000425819 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
SCRN1-205ENST00000425819 KRTAP9-3Q9BYQ3 159 aa7.11□□□□□ -1.27
SCRN1-205ENST00000425819 SPATA8Q6RVD6 105 aa7.09□□□□□ -1.27
SCRN1-205ENST00000425819 KRTAP19-1Q8IUB9 90 aa7.08□□□□□ -1.28
SCRN1-205ENST00000425819 UQCR11O14957 56 aa7.05□□□□□ -1.28
SCRN1-205ENST00000425819 SPRR2GQ9BYE4 73 aa7.05□□□□□ -1.28
SCRN1-205ENST00000425819 PMAIP1Q13794 54 aa7.03□□□□□ -1.28
SCRN1-205ENST00000425819 LINC01554Q52M75 96 aa7.03□□□□□ -1.28
SCRN1-205ENST00000425819 A6NED7 52 aa7.02□□□□□ -1.29
SCRN1-205ENST00000425819 A0A0D9SG42 100 aa6.99□□□□□ -1.29
SCRN1-205ENST00000425819 MIR22HGQ0VDD5 57 aa6.98□□□□□ -1.29
SCRN1-205ENST00000425819 A8MU10 97 aa6.96□□□□□ -1.29
SCRN1-205ENST00000425819 LCE2BO14633 110 aa6.95□□□□□ -1.3
SCRN1-205ENST00000425819 KRTAP19-8Q3LI54 63 aa6.91□□□□□ -1.3
SCRN1-205ENST00000425819 MT1BP07438 61 aa6.85□□□□□ -1.31
SCRN1-205ENST00000425819 CDC42SE1Q9NRR8 79 aa6.83□□□□□ -1.32
SCRN1-205ENST00000425819 A6NN06 94 aa6.82□□□□□ -1.32
SCRN1-205ENST00000425819 SPINT4Q6UDR6 99 aa6.82□□□□□ -1.32
SCRN1-205ENST00000425819 KRTAP12-1P59990 96 aa6.82□□□□□ -1.32
SCRN1-205ENST00000425819 KTN1-AS1Q86SY8 53 aa6.82□□□□□ -1.32
SCRN1-205ENST00000425819 KRTAP12-2P59991 146 aa6.8□□□□□ -1.32
SCRN1-205ENST00000425819 PLAC4Q8WY50 150 aa6.8□□□□□ -1.32
SCRN1-205ENST00000425819 KRTAP9-2Q9BYQ4 174 aa6.78□□□□□ -1.32
SCRN1-205ENST00000425819 USH2AO75445 5202 aa6.74□□□□□ -1.33
SCRN1-205ENST00000425819 K7ERS5 55 aa6.69□□□□□ -1.34
SCRN1-205ENST00000425819 CAMK2N1Q7Z7J9 78 aa6.68□□□□□ -1.34
SCRN1-205ENST00000425819 MT1XP80297 61 aa6.58□□□□□ -1.36
SCRN1-205ENST00000425819 FSIP2Q5CZC0 6907 aa6.57□□□□□ -1.36
SCRN1-205ENST00000425819 KRTAP10-5P60370 271 aa6.57□□□□□ -1.36
SCRN1-205ENST00000425819 KRTAP19-6Q3LI70 58 aa6.57□□□□□ -1.36
SCRN1-205ENST00000425819 SSPOA2VEC9 5147 aa6.53□□□□□ -1.36
SCRN1-205ENST00000425819 PRO2289Q9P1D8 64 aa6.52□□□□□ -1.36
SCRN1-205ENST00000425819 CRCT1Q9UGL9 99 aa6.5□□□□□ -1.37
SCRN1-205ENST00000425819 C10orf95Q9H7T3 257 aa6.47□□□□□ -1.37
SCRN1-205ENST00000425819 LOC100996750A0A140TA64 210 aa6.4□□□□□ -1.39
SCRN1-205ENST00000425819 KRTAP4-6Q9BYQ5 205 aa6.4□□□□□ -1.39
SCRN1-205ENST00000425819 ROMO1P60602 79 aa6.38□□□□□ -1.39
SCRN1-205ENST00000425819 KRTAP9-6A0A140TA67 174 aa6.33□□□□□ -1.4
SCRN1-205ENST00000425819 FCGBPQ9Y6R7 5405 aaPredicted RBP6.32□□□□□ -1.4
SCRN1-205ENST00000425819 KRTAP10-7P60409 375 aaPredicted RBP6.31□□□□□ -1.4
SCRN1-205ENST00000425819 H3BS24 57 aa6.31□□□□□ -1.4
SCRN1-205ENST00000425819 TNP1P09430 55 aa6.3□□□□□ -1.4
SCRN1-205ENST00000425819 PRAC1Q96KF2 57 aa6.27□□□□□ -1.41
SCRN1-205ENST00000425819 KRTAP25-1Q3LHN0 102 aa6.24□□□□□ -1.41
SCRN1-205ENST00000425819 KRTAP10-12P60413 245 aa6.23□□□□□ -1.41
SCRN1-205ENST00000425819 KRTAP4-8A0A0G2JLE6 195 aa6.13□□□□□ -1.43
SCRN1-205ENST00000425819 KRTAP4-8Q9BYQ9 185 aa6.13□□□□□ -1.43
SCRN1-205ENST00000425819 LCE3AQ5TA76 89 aa6.1□□□□□ -1.43
SCRN1-205ENST00000425819 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.03□□□□□ -1.44
SCRN1-205ENST00000425819 KMT2DO14686 5537 aa6.02□□□□□ -1.44
SCRN1-205ENST00000425819 KRTAP8-1Q8IUC2 63 aa6.01□□□□□ -1.45
SCRN1-205ENST00000425819 KRTAP23-1A1A580 65 aa6□□□□□ -1.45
SCRN1-205ENST00000425819 MACF1Q9UPN3 7388 aaKnown RBP5.98□□□□□ -1.45
SCRN1-205ENST00000425819 PP632Q6XCG6 107 aa5.97□□□□□ -1.45
SCRN1-205ENST00000425819 KRTAP19-5Q3LI72 72 aa5.91□□□□□ -1.46
SCRN1-205ENST00000425819 KRTAP19-7Q3SYF9 63 aa5.87□□□□□ -1.47
SCRN1-205ENST00000425819 KRTAP12-3P60328 96 aa5.84□□□□□ -1.47
SCRN1-205ENST00000425819 SYNE2Q8WXH0 6885 aaKnown RBP5.84□□□□□ -1.47
SCRN1-205ENST00000425819 SPRR2FQ96RM1 72 aa5.84□□□□□ -1.48
SCRN1-205ENST00000425819 KRTAP6-3Q3LI67 103 aa5.81□□□□□ -1.48
SCRN1-205ENST00000425819 KRTAP5-9P26371 169 aa5.8□□□□□ -1.48
SCRN1-205ENST00000425819 MT1EP04732 61 aa5.78□□□□□ -1.48
SCRN1-205ENST00000425819 KRTAP9-7A8MTY7 169 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms