RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 TRAV7A0A075B6U4 112 aa7.43□□□□□ -1.22
BRAT1-202ENST00000421712 A8MUN3 132 aa7.41□□□□□ -1.22
BRAT1-202ENST00000421712 KRTAP9-3Q9BYQ3 159 aa7.39□□□□□ -1.23
BRAT1-202ENST00000421712 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.36□□□□□ -1.23
BRAT1-202ENST00000421712 NDUFC1O43677 76 aa7.36□□□□□ -1.23
BRAT1-202ENST00000421712 KRTAP3-3Q9BYR6 98 aa7.36□□□□□ -1.23
BRAT1-202ENST00000421712 LCE2BO14633 110 aa7.31□□□□□ -1.24
BRAT1-202ENST00000421712 SERP2Q8N6R1 65 aa7.28□□□□□ -1.24
BRAT1-202ENST00000421712 SNURFQ9Y675 71 aa7.28□□□□□ -1.24
BRAT1-202ENST00000421712 DMAC1Q96GE9 116 aa7.27□□□□□ -1.25
BRAT1-202ENST00000421712 C20orf197Q8N268 126 aa7.24□□□□□ -1.25
BRAT1-202ENST00000421712 USH2AO75445 5202 aa7.21□□□□□ -1.26
BRAT1-202ENST00000421712 ACYP2P14621 99 aa7.21□□□□□ -1.26
BRAT1-202ENST00000421712 ADM2Q7Z4H4 148 aa7.15□□□□□ -1.26
BRAT1-202ENST00000421712 H0YAA0 97 aa7.14□□□□□ -1.27
BRAT1-202ENST00000421712 COX7CP15954 63 aa7.12□□□□□ -1.27
BRAT1-202ENST00000421712 KRTAP19-1Q8IUB9 90 aa7.12□□□□□ -1.27
BRAT1-202ENST00000421712 CHKB-CPT1BH3BT56 60 aa7.11□□□□□ -1.27
BRAT1-202ENST00000421712 SPANXA2-OT1Q8N9U9 137 aa7.1□□□□□ -1.27
BRAT1-202ENST00000421712 CRIPTQ9P021 101 aa7.09□□□□□ -1.27
BRAT1-202ENST00000421712 SSPOA2VEC9 5147 aa7.09□□□□□ -1.28
BRAT1-202ENST00000421712 SPTSSBQ8NFR3 76 aa7.08□□□□□ -1.28
BRAT1-202ENST00000421712 SPRR2GQ9BYE4 73 aa7.08□□□□□ -1.28
BRAT1-202ENST00000421712 ANAPC13Q9BS18 74 aa7.05□□□□□ -1.28
BRAT1-202ENST00000421712 Q5VV11 94 aa7.04□□□□□ -1.28
BRAT1-202ENST00000421712 SYNE2Q8WXH0 6885 aaKnown RBP7.03□□□□□ -1.28
BRAT1-202ENST00000421712 FCGBPQ9Y6R7 5405 aaPredicted RBP7.02□□□□□ -1.28
BRAT1-202ENST00000421712 MACF1Q9UPN3 7388 aaKnown RBP7□□□□□ -1.29
BRAT1-202ENST00000421712 KRTAP19-6Q3LI70 58 aa6.99□□□□□ -1.29
BRAT1-202ENST00000421712 P0C880 135 aa6.98□□□□□ -1.29
BRAT1-202ENST00000421712 KRTAP19-8Q3LI54 63 aa6.98□□□□□ -1.29
BRAT1-202ENST00000421712 MT1BP07438 61 aa6.95□□□□□ -1.3
BRAT1-202ENST00000421712 R4GN34 69 aa6.95□□□□□ -1.3
BRAT1-202ENST00000421712 H7BZZ5 65 aa6.94□□□□□ -1.3
BRAT1-202ENST00000421712 CYSTM1Q9H1C7 97 aa6.94□□□□□ -1.3
BRAT1-202ENST00000421712 KRTAP3-2Q9BYR7 98 aa6.93□□□□□ -1.3
BRAT1-202ENST00000421712 COA5Q86WW8 74 aa6.91□□□□□ -1.3
BRAT1-202ENST00000421712 M0QZ58 72 aa6.9□□□□□ -1.3
BRAT1-202ENST00000421712 CCDC179H3BU77 68 aa6.87□□□□□ -1.31
BRAT1-202ENST00000421712 A6NN06 94 aa6.85□□□□□ -1.31
BRAT1-202ENST00000421712 LINC01554Q52M75 96 aa6.82□□□□□ -1.32
BRAT1-202ENST00000421712 PLAC4Q8WY50 150 aa6.8□□□□□ -1.32
BRAT1-202ENST00000421712 SEC61GP60059 68 aa6.77□□□□□ -1.33
BRAT1-202ENST00000421712 KRTAP10-5P60370 271 aa6.75□□□□□ -1.33
BRAT1-202ENST00000421712 SERP1Q9Y6X1 66 aa6.74□□□□□ -1.33
BRAT1-202ENST00000421712 ATP5EP56381 51 aaPredicted RBP6.7□□□□□ -1.34
BRAT1-202ENST00000421712 NEBP20929 6669 aa6.66□□□□□ -1.34
BRAT1-202ENST00000421712 PRO2289Q9P1D8 64 aa6.66□□□□□ -1.34
BRAT1-202ENST00000421712 KRTAP6-3Q3LI67 103 aa6.65□□□□□ -1.34
BRAT1-202ENST00000421712 TMEM258P61165 79 aa6.62□□□□□ -1.35
BRAT1-202ENST00000421712 KRTAP13-4Q3LI77 160 aa6.6□□□□□ -1.35
BRAT1-202ENST00000421712 A0A1B0GU69 56 aa6.59□□□□□ -1.35
BRAT1-202ENST00000421712 MT1XP80297 61 aa6.59□□□□□ -1.35
BRAT1-202ENST00000421712 A0A1B0GU33 70 aa6.58□□□□□ -1.36
BRAT1-202ENST00000421712 SPATA8Q6RVD6 105 aa6.53□□□□□ -1.36
BRAT1-202ENST00000421712 A0A0D9SG42 100 aa6.52□□□□□ -1.37
BRAT1-202ENST00000421712 MUC12Q9UKN1 5478 aa6.52□□□□□ -1.37
BRAT1-202ENST00000421712 KRTAP20-1Q3LI63 56 aa6.51□□□□□ -1.37
BRAT1-202ENST00000421712 PRR15LQ9BU68 103 aa6.48□□□□□ -1.37
BRAT1-202ENST00000421712 CAMK2N1Q7Z7J9 78 aa6.45□□□□□ -1.38
BRAT1-202ENST00000421712 LINC01558Q9Y6Z2 57 aa6.43□□□□□ -1.38
BRAT1-202ENST00000421712 SPINT4Q6UDR6 99 aa6.42□□□□□ -1.38
BRAT1-202ENST00000421712 SMIM26A0A096LP01 95 aa6.4□□□□□ -1.38
BRAT1-202ENST00000421712 KRTAP12-2P59991 146 aa6.36□□□□□ -1.39
BRAT1-202ENST00000421712 A8MU10 97 aa6.33□□□□□ -1.4
BRAT1-202ENST00000421712 KRTAP12-1P59990 96 aa6.32□□□□□ -1.4
BRAT1-202ENST00000421712 KRTAP10-7P60409 375 aaPredicted RBP6.32□□□□□ -1.4
BRAT1-202ENST00000421712 PCP4P48539 62 aa6.31□□□□□ -1.4
BRAT1-202ENST00000421712 KRTAP8-1Q8IUC2 63 aa6.29□□□□□ -1.4
BRAT1-202ENST00000421712 KMT2DO14686 5537 aa6.29□□□□□ -1.4
BRAT1-202ENST00000421712 MDN1Q9NU22 5596 aa6.26□□□□□ -1.41
BRAT1-202ENST00000421712 KRTAP5-9P26371 169 aa6.26□□□□□ -1.41
BRAT1-202ENST00000421712 UQCR11O14957 56 aa6.25□□□□□ -1.41
BRAT1-202ENST00000421712 KRTAP10-12P60413 245 aa6.25□□□□□ -1.41
BRAT1-202ENST00000421712 V9GYY9 64 aa6.25□□□□□ -1.41
BRAT1-202ENST00000421712 KRTAP4-8A0A0G2JLE6 195 aa6.24□□□□□ -1.41
BRAT1-202ENST00000421712 KRTAP4-8Q9BYQ9 185 aa6.24□□□□□ -1.41
BRAT1-202ENST00000421712 SPRR2FQ96RM1 72 aa6.22□□□□□ -1.41
BRAT1-202ENST00000421712 PSPHP1O15172 72 aa6.18□□□□□ -1.42
BRAT1-202ENST00000421712 Q1T7F1 81 aa6.18□□□□□ -1.42
BRAT1-202ENST00000421712 KRTAP2-3P0C7H8 128 aa6.14□□□□□ -1.43
BRAT1-202ENST00000421712 MIR22HGQ0VDD5 57 aa6.14□□□□□ -1.43
BRAT1-202ENST00000421712 KRTAP2-4Q9BYR9 128 aa6.14□□□□□ -1.43
BRAT1-202ENST00000421712 RPS28P62857 69 aaKnown RBP6.09□□□□□ -1.43
BRAT1-202ENST00000421712 SPRR2EP22531 72 aa6.07□□□□□ -1.44
BRAT1-202ENST00000421712 SPRR2BP35325 72 aa6.07□□□□□ -1.44
BRAT1-202ENST00000421712 SPRR2AP35326 72 aa6.07□□□□□ -1.44
BRAT1-202ENST00000421712 C10orf95Q9H7T3 257 aa6.03□□□□□ -1.44
BRAT1-202ENST00000421712 K7ERS5 55 aa6.02□□□□□ -1.45
BRAT1-202ENST00000421712 A6NED7 52 aa6□□□□□ -1.45
BRAT1-202ENST00000421712 TNP1P09430 55 aa6□□□□□ -1.45
BRAT1-202ENST00000421712 GPR98Q8WXG9 6306 aa5.97□□□□□ -1.45
BRAT1-202ENST00000421712 LCE1AQ5T7P2 110 aa5.97□□□□□ -1.45
BRAT1-202ENST00000421712 KRTAP2-2Q9BYT5 123 aa5.9□□□□□ -1.46
BRAT1-202ENST00000421712 KRTAP2-1Q9BYU5 128 aa5.9□□□□□ -1.46
BRAT1-202ENST00000421712 KRTAP19-7Q3SYF9 63 aa5.87□□□□□ -1.47
BRAT1-202ENST00000421712 SPRR2DP22532 72 aa5.86□□□□□ -1.47
BRAT1-202ENST00000421712 KRTAP19-5Q3LI72 72 aa5.84□□□□□ -1.47
BRAT1-202ENST00000421712 LCE3AQ5TA76 89 aa5.84□□□□□ -1.47
BRAT1-202ENST00000421712 MT1EP04732 61 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms