RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 CSAG1Q6PB30 78 aa8.37□□□□□ -1.07
LINC00271-201ENST00000421378 SPANXA2-OT1Q8N9U9 137 aa8.37□□□□□ -1.07
LINC00271-201ENST00000421378 NDUFC1O43677 76 aa8.35□□□□□ -1.07
LINC00271-201ENST00000421378 CYSTM1Q9H1C7 97 aa8.33□□□□□ -1.08
LINC00271-201ENST00000421378 ACYP2P14621 99 aa8.32□□□□□ -1.08
LINC00271-201ENST00000421378 MT2AP02795 61 aa8.31□□□□□ -1.08
LINC00271-201ENST00000421378 CCDC179H3BU77 68 aa8.31□□□□□ -1.08
LINC00271-201ENST00000421378 H7BZZ5 65 aa8.31□□□□□ -1.08
LINC00271-201ENST00000421378 MT1FP04733 61 aa8.26□□□□□ -1.09
LINC00271-201ENST00000421378 KRTAP10-10P60014 251 aa8.24□□□□□ -1.09
LINC00271-201ENST00000421378 CHKB-CPT1BH3BT56 60 aa8.19□□□□□ -1.1
LINC00271-201ENST00000421378 LCE2BO14633 110 aa8.18□□□□□ -1.1
LINC00271-201ENST00000421378 KRTAP9-2Q9BYQ4 174 aa8.14□□□□□ -1.11
LINC00271-201ENST00000421378 SPTSSBQ8NFR3 76 aa8.14□□□□□ -1.11
LINC00271-201ENST00000421378 H0YAA0 97 aa8.12□□□□□ -1.11
LINC00271-201ENST00000421378 COA5Q86WW8 74 aa8.11□□□□□ -1.11
LINC00271-201ENST00000421378 KRTAP9-3Q9BYQ3 159 aa8.1□□□□□ -1.11
LINC00271-201ENST00000421378 ATP5EP56381 51 aaPredicted RBP8.06□□□□□ -1.12
LINC00271-201ENST00000421378 ADM2Q7Z4H4 148 aa8.05□□□□□ -1.12
LINC00271-201ENST00000421378 TMEM258P61165 79 aa8.04□□□□□ -1.12
LINC00271-201ENST00000421378 LOC100996750A0A140TA64 210 aa8□□□□□ -1.13
LINC00271-201ENST00000421378 KRTAP4-6Q9BYQ5 205 aa8□□□□□ -1.13
LINC00271-201ENST00000421378 CRIPTQ9P021 101 aa7.96□□□□□ -1.14
LINC00271-201ENST00000421378 PCP4P48539 62 aa7.95□□□□□ -1.14
LINC00271-201ENST00000421378 P0C880 135 aa7.93□□□□□ -1.14
LINC00271-201ENST00000421378 KRTAP19-1Q8IUB9 90 aa7.92□□□□□ -1.14
LINC00271-201ENST00000421378 SPRR2GQ9BYE4 73 aa7.91□□□□□ -1.14
LINC00271-201ENST00000421378 FSIP2Q5CZC0 6907 aa7.91□□□□□ -1.14
LINC00271-201ENST00000421378 USH2AO75445 5202 aa7.84□□□□□ -1.15
LINC00271-201ENST00000421378 R4GN34 69 aa7.83□□□□□ -1.16
LINC00271-201ENST00000421378 SEC61GP60059 68 aa7.8□□□□□ -1.16
LINC00271-201ENST00000421378 M0QZ58 72 aa7.78□□□□□ -1.16
LINC00271-201ENST00000421378 CRCT1Q9UGL9 99 aa7.77□□□□□ -1.17
LINC00271-201ENST00000421378 SERP1Q9Y6X1 66 aa7.77□□□□□ -1.17
LINC00271-201ENST00000421378 KRTAP19-8Q3LI54 63 aa7.76□□□□□ -1.17
LINC00271-201ENST00000421378 Q5VV11 94 aa7.74□□□□□ -1.17
LINC00271-201ENST00000421378 KRTAP9-6A0A140TA67 174 aa7.7□□□□□ -1.18
LINC00271-201ENST00000421378 A0A1B0GU69 56 aa7.7□□□□□ -1.18
LINC00271-201ENST00000421378 MT1BP07438 61 aa7.7□□□□□ -1.18
LINC00271-201ENST00000421378 SSPOA2VEC9 5147 aa7.67□□□□□ -1.18
LINC00271-201ENST00000421378 LINC01554Q52M75 96 aa7.65□□□□□ -1.18
LINC00271-201ENST00000421378 LINC01558Q9Y6Z2 57 aa7.63□□□□□ -1.19
LINC00271-201ENST00000421378 PRR15LQ9BU68 103 aa7.61□□□□□ -1.19
LINC00271-201ENST00000421378 A0A1B0GU33 70 aa7.6□□□□□ -1.19
LINC00271-201ENST00000421378 KRTAP19-6Q3LI70 58 aa7.6□□□□□ -1.19
LINC00271-201ENST00000421378 KRTAP13-4Q3LI77 160 aa7.6□□□□□ -1.19
LINC00271-201ENST00000421378 PLAC4Q8WY50 150 aa7.54□□□□□ -1.2
LINC00271-201ENST00000421378 SPATA8Q6RVD6 105 aa7.52□□□□□ -1.21
LINC00271-201ENST00000421378 RPS28P62857 69 aaKnown RBP7.51□□□□□ -1.21
LINC00271-201ENST00000421378 V9GYY9 64 aa7.5□□□□□ -1.21
LINC00271-201ENST00000421378 SMIM26A0A096LP01 95 aa7.49□□□□□ -1.21
LINC00271-201ENST00000421378 A6NN06 94 aa7.48□□□□□ -1.21
LINC00271-201ENST00000421378 Q1T7F1 81 aa7.46□□□□□ -1.21
LINC00271-201ENST00000421378 FCGBPQ9Y6R7 5405 aaPredicted RBP7.46□□□□□ -1.22
LINC00271-201ENST00000421378 A0A0D9SG42 100 aa7.44□□□□□ -1.22
LINC00271-201ENST00000421378 KRTAP10-5P60370 271 aa7.42□□□□□ -1.22
LINC00271-201ENST00000421378 PSPHP1O15172 72 aa7.39□□□□□ -1.23
LINC00271-201ENST00000421378 UQCR11O14957 56 aa7.37□□□□□ -1.23
LINC00271-201ENST00000421378 PRO2289Q9P1D8 64 aa7.37□□□□□ -1.23
LINC00271-201ENST00000421378 MT1XP80297 61 aa7.34□□□□□ -1.23
LINC00271-201ENST00000421378 A8MU10 97 aa7.33□□□□□ -1.24
LINC00271-201ENST00000421378 SPINT4Q6UDR6 99 aa7.3□□□□□ -1.24
LINC00271-201ENST00000421378 KRTAP12-1P59990 96 aa7.29□□□□□ -1.24
LINC00271-201ENST00000421378 CAMK2N1Q7Z7J9 78 aa7.28□□□□□ -1.24
LINC00271-201ENST00000421378 KRTAP12-2P59991 146 aa7.25□□□□□ -1.25
LINC00271-201ENST00000421378 MIR22HGQ0VDD5 57 aa7.24□□□□□ -1.25
LINC00271-201ENST00000421378 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.21□□□□□ -1.25
LINC00271-201ENST00000421378 KRTAP4-8Q9BYQ9 185 aa7.18□□□□□ -1.26
LINC00271-201ENST00000421378 MACF1Q9UPN3 7388 aaKnown RBP7.18□□□□□ -1.26
LINC00271-201ENST00000421378 A6NED7 52 aa7.17□□□□□ -1.26
LINC00271-201ENST00000421378 K7ERS5 55 aa7.03□□□□□ -1.28
LINC00271-201ENST00000421378 KRTAP10-7P60409 375 aaPredicted RBP7.03□□□□□ -1.28
LINC00271-201ENST00000421378 SYNE2Q8WXH0 6885 aaKnown RBP7.01□□□□□ -1.29
LINC00271-201ENST00000421378 KRTAP9-7A8MTY7 169 aa6.99□□□□□ -1.29
LINC00271-201ENST00000421378 KRTAP10-12P60413 245 aa6.98□□□□□ -1.29
LINC00271-201ENST00000421378 CDC42SE1Q9NRR8 79 aa6.95□□□□□ -1.3
LINC00271-201ENST00000421378 KMT2DO14686 5537 aa6.95□□□□□ -1.3
LINC00271-201ENST00000421378 C10orf95Q9H7T3 257 aa6.91□□□□□ -1.3
LINC00271-201ENST00000421378 KRTAP6-3Q3LI67 103 aa6.89□□□□□ -1.31
LINC00271-201ENST00000421378 KRTAP4-8A0A0G2JLE6 195 aa6.87□□□□□ -1.31
LINC00271-201ENST00000421378 LCE3BQ5TA77 95 aa6.85□□□□□ -1.31
LINC00271-201ENST00000421378 KRTAP8-1Q8IUC2 63 aa6.85□□□□□ -1.31
LINC00271-201ENST00000421378 TNP1P09430 55 aa6.82□□□□□ -1.32
LINC00271-201ENST00000421378 KRTAP5-9P26371 169 aa6.79□□□□□ -1.32
LINC00271-201ENST00000421378 BRK1Q8WUW1 75 aa6.72□□□□□ -1.33
LINC00271-201ENST00000421378 SPRR2FQ96RM1 72 aa6.72□□□□□ -1.33
LINC00271-201ENST00000421378 KRTAP4-12Q9BQ66 201 aa6.68□□□□□ -1.34
LINC00271-201ENST00000421378 KRTAP9-9Q9BYP9 154 aa6.68□□□□□ -1.34
LINC00271-201ENST00000421378 KRTAP9-4Q9BYQ2 154 aa6.68□□□□□ -1.34
LINC00271-201ENST00000421378 KRTAP25-1Q3LHN0 102 aa6.67□□□□□ -1.34
LINC00271-201ENST00000421378 MUC12Q9UKN1 5478 aa6.66□□□□□ -1.34
LINC00271-201ENST00000421378 ROMO1P60602 79 aa6.62□□□□□ -1.35
LINC00271-201ENST00000421378 LCE3AQ5TA76 89 aa6.61□□□□□ -1.35
LINC00271-201ENST00000421378 MDN1Q9NU22 5596 aa6.56□□□□□ -1.36
LINC00271-201ENST00000421378 KRTAP19-7Q3SYF9 63 aa6.56□□□□□ -1.36
LINC00271-201ENST00000421378 KRTAP19-5Q3LI72 72 aa6.52□□□□□ -1.37
LINC00271-201ENST00000421378 SPRR2EP22531 72 aa6.5□□□□□ -1.37
LINC00271-201ENST00000421378 SPRR2BP35325 72 aa6.5□□□□□ -1.37
LINC00271-201ENST00000421378 SPRR2AP35326 72 aa6.5□□□□□ -1.37
LINC00271-201ENST00000421378 KRTAP4-7Q9BYR0 210 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms