RNA–Protein interactions for RNA: ENST00000420453.1

LINC00993-201, long intergenic non-protein coding RNA 993, humanhuman

BASIC

Gene LINC00993, Length 540 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-201ENST00000420453 LIMD2Q9BT23 127 aa2.78□□□□□ -1.96
LINC00993-201ENST00000420453 FLG2Q5D862 2391 aaPredicted RBP2.77□□□□□ -1.97
LINC00993-201ENST00000420453 A0A087WSZ3 146 aa2.77□□□□□ -1.97
LINC00993-201ENST00000420453 A0A0G2JQZ4 141 aa2.77□□□□□ -1.97
LINC00993-201ENST00000420453 SRRM2Q9UQ35 2752 aaKnown RBP2.77□□□□□ -1.97
LINC00993-201ENST00000420453 TRAV22A0A0B4J277 110 aa2.76□□□□□ -1.97
LINC00993-201ENST00000420453 H3BPC8 53 aa2.76□□□□□ -1.97
LINC00993-201ENST00000420453 K7EQZ3 153 aa2.76□□□□□ -1.97
LINC00993-201ENST00000420453 PSPHP1O15172 72 aa2.76□□□□□ -1.97
LINC00993-201ENST00000420453 KRTAP12-2P59991 146 aa2.76□□□□□ -1.97
LINC00993-201ENST00000420453 SPANXA2-OT1Q8N9U9 137 aa2.75□□□□□ -1.97
LINC00993-201ENST00000420453 A8MUN3 132 aa2.74□□□□□ -1.97
LINC00993-201ENST00000420453 WFDC13Q8IUB5 93 aa2.74□□□□□ -1.97
LINC00993-201ENST00000420453 A8MU10 97 aa2.73□□□□□ -1.97
LINC00993-201ENST00000420453 H0Y9P7 68 aa2.73□□□□□ -1.97
LINC00993-201ENST00000420453 LINC00208Q96KT6 92 aa2.73□□□□□ -1.97
LINC00993-201ENST00000420453 Q96NJ1 140 aa2.73□□□□□ -1.97
LINC00993-201ENST00000420453 LINC00472Q9H8W2 130 aa2.73□□□□□ -1.97
LINC00993-201ENST00000420453 Q5VV11 94 aa2.72□□□□□ -1.97
LINC00993-201ENST00000420453 PRR15LQ9BU68 103 aa2.72□□□□□ -1.97
LINC00993-201ENST00000420453 CHKB-CPT1BH3BT56 60 aa2.71□□□□□ -1.98
LINC00993-201ENST00000420453 NDUFS5O43920 106 aa2.71□□□□□ -1.98
LINC00993-201ENST00000420453 CASC2Q6XLA1 102 aa2.71□□□□□ -1.98
LINC00993-201ENST00000420453 KTN1-AS1Q86SY8 53 aa2.71□□□□□ -1.98
LINC00993-201ENST00000420453 LRP1Q07954 4544 aaKnown RBP2.71□□□□□ -1.98
LINC00993-201ENST00000420453 MYCBP2O75592 4640 aa2.7□□□□□ -1.98
LINC00993-201ENST00000420453 ABCA13Q86UQ4 5058 aa2.7□□□□□ -1.98
LINC00993-201ENST00000420453 DMBT1Q9UGM3 2413 aaPredicted RBP2.7□□□□□ -1.98
LINC00993-201ENST00000420453 A8MWP4 228 aa2.7□□□□□ -1.98
LINC00993-201ENST00000420453 DEFB116Q30KQ4 102 aa2.69□□□□□ -1.98
LINC00993-201ENST00000420453 ATP11AUNQ6ZP68 121 aa2.69□□□□□ -1.98
LINC00993-201ENST00000420453 COA5Q86WW8 74 aa2.69□□□□□ -1.98
LINC00993-201ENST00000420453 RETNLBQ9BQ08 111 aa2.69□□□□□ -1.98
LINC00993-201ENST00000420453 LOC101927531A0A1B0GV80 90 aa2.68□□□□□ -1.98
LINC00993-201ENST00000420453 A0A1B0GVX0 72 aa2.68□□□□□ -1.98
LINC00993-201ENST00000420453 A6NED7 52 aa2.68□□□□□ -1.98
LINC00993-201ENST00000420453 C8orf87E5RJ46 101 aa2.68□□□□□ -1.98
LINC00993-201ENST00000420453 TPRXLQ17RH7 258 aa2.68□□□□□ -1.98
LINC00993-201ENST00000420453 SPTSSBQ8NFR3 76 aa2.68□□□□□ -1.98
LINC00993-201ENST00000420453 CDC42SE1Q9NRR8 79 aa2.68□□□□□ -1.98
LINC00993-201ENST00000420453 FAT3Q8TDW7 4589 aa2.67□□□□□ -1.98
LINC00993-201ENST00000420453 PKHD1L1Q86WI1 4243 aa2.67□□□□□ -1.98
LINC00993-201ENST00000420453 TP53AIP1Q9HCN2 124 aa2.67□□□□□ -1.98
LINC00993-201ENST00000420453 MMP24-AS1A0A0U1RRL7 71 aa2.66□□□□□ -1.98
LINC00993-201ENST00000420453 RBM12B-AS1Q9P1G2 102 aa2.66□□□□□ -1.98
LINC00993-201ENST00000420453 LINC01558Q9Y6Z2 57 aa2.66□□□□□ -1.98
LINC00993-201ENST00000420453 PCLOQ9Y6V0 5065 aa2.66□□□□□ -1.98
LINC00993-201ENST00000420453 IGHV6-1A0A0B4J1U7 121 aa2.65□□□□□ -1.99
LINC00993-201ENST00000420453 A6NN06 94 aa2.65□□□□□ -1.99
LINC00993-201ENST00000420453 LINC00313P59037 77 aa2.65□□□□□ -1.99
LINC00993-201ENST00000420453 C7orf65Q6ZTY9 151 aa2.65□□□□□ -1.99
LINC00993-201ENST00000420453 C8orf17Q9NRJ1 99 aa2.65□□□□□ -1.99
LINC00993-201ENST00000420453 TNXBP22105 4242 aa2.65□□□□□ -1.99
LINC00993-201ENST00000420453 PCOTHQ58A44 107 aa2.64□□□□□ -1.99
LINC00993-201ENST00000420453 LCA10Q71F78 164 aa2.64□□□□□ -1.99
LINC00993-201ENST00000420453 C20orf166-AS1Q96NR2 134 aa2.63□□□□□ -1.99
LINC00993-201ENST00000420453 C9orf92A6NGG3 77 aa2.62□□□□□ -1.99
LINC00993-201ENST00000420453 A8MUU9 505 aa2.62□□□□□ -1.99
LINC00993-201ENST00000420453 MRPL34Q9BQ48 92 aaKnown RBP2.62□□□□□ -1.99
LINC00993-201ENST00000420453 HRES1P13985 223 aa2.6□□□□□ -1.99
LINC00993-201ENST00000420453 RPL37P61927 97 aaKnown RBP2.6□□□□□ -1.99
LINC00993-201ENST00000420453 SPINK7P58062 85 aa2.59□□□□□ -1.99
LINC00993-201ENST00000420453 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
LINC00993-201ENST00000420453 ACYP2P14621 99 aa2.58□□□□□ -2
LINC00993-201ENST00000420453 A0A1B0GU69 56 aa2.55□□□□□ -2
LINC00993-201ENST00000420453 HERC1Q15751 4861 aa2.54□□□□□ -2
LINC00993-201ENST00000420453 HMCN2Q8NDA2 5059 aa2.53□□□□□ -2
LINC00993-201ENST00000420453 Q5W150 140 aa2.53□□□□□ -2
LINC00993-201ENST00000420453 DMAC1Q96GE9 116 aa2.53□□□□□ -2
LINC00993-201ENST00000420453 LINC01554Q52M75 96 aa2.52□□□□□ -2.01
LINC00993-201ENST00000420453 SPATA8Q6RVD6 105 aa2.52□□□□□ -2.01
LINC00993-201ENST00000420453 KRTAP5-5Q701N2 237 aaPredicted RBP2.52□□□□□ -2.01
LINC00993-201ENST00000420453 UQCR11O14957 56 aa2.51□□□□□ -2.01
LINC00993-201ENST00000420453 MIR22HGQ0VDD5 57 aa2.51□□□□□ -2.01
LINC00993-201ENST00000420453 LRP2P98164 4655 aa2.5□□□□□ -2.01
LINC00993-201ENST00000420453 LPAP08519 4548 aa2.49□□□□□ -2.01
LINC00993-201ENST00000420453 KRTAP4-1Q9BYQ7 146 aa2.49□□□□□ -2.01
LINC00993-201ENST00000420453 ADM2Q7Z4H4 148 aa2.48□□□□□ -2.01
LINC00993-201ENST00000420453 CSAG1Q6PB30 78 aa2.45□□□□□ -2.02
LINC00993-201ENST00000420453 KRTAP19-2Q3LHN2 52 aa2.44□□□□□ -2.02
LINC00993-201ENST00000420453 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
LINC00993-201ENST00000420453 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
LINC00993-201ENST00000420453 COX6B2Q6YFQ2 88 aa2.44□□□□□ -2.02
LINC00993-201ENST00000420453 UBR4Q5T4S7 5183 aa2.44□□□□□ -2.02
LINC00993-201ENST00000420453 MUC17Q685J3 4493 aa2.42□□□□□ -2.02
LINC00993-201ENST00000420453 H1FX-AS1Q4G0G2 97 aa2.4□□□□□ -2.03
LINC00993-201ENST00000420453 KRTAP25-1Q3LHN0 102 aa2.39□□□□□ -2.03
LINC00993-201ENST00000420453 K7ERS5 55 aa2.38□□□□□ -2.03
LINC00993-201ENST00000420453 CAMK2N1Q7Z7J9 78 aa2.38□□□□□ -2.03
LINC00993-201ENST00000420453 MUC2Q02817 5179 aa2.38□□□□□ -2.03
LINC00993-201ENST00000420453 MT1HP80294 61 aa2.37□□□□□ -2.03
LINC00993-201ENST00000420453 A0A1B0GU33 70 aa2.36□□□□□ -2.03
LINC00993-201ENST00000420453 H0YAA0 97 aa2.36□□□□□ -2.03
LINC00993-201ENST00000420453 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
LINC00993-201ENST00000420453 S4R3F8 94 aa2.35□□□□□ -2.03
LINC00993-201ENST00000420453 RNF213Q63HN8 5207 aa2.35□□□□□ -2.03
LINC00993-201ENST00000420453 ROMO1P60602 79 aa2.34□□□□□ -2.03
LINC00993-201ENST00000420453 M0R2T5 61 aa2.32□□□□□ -2.04
LINC00993-201ENST00000420453 FAT4Q6V0I7 4981 aa2.3□□□□□ -2.04
LINC00993-201ENST00000420453 SPINT4Q6UDR6 99 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms