RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 SMIM20Q8N5G0 67 aa8.27□□□□□ -1.09
EPCAM-203ENST00000419334 KRTAP3-3Q9BYR6 98 aa8.25□□□□□ -1.09
EPCAM-203ENST00000419334 TRAV7A0A075B6U4 112 aa8.24□□□□□ -1.09
EPCAM-203ENST00000419334 LCE2BO14633 110 aa8.23□□□□□ -1.09
EPCAM-203ENST00000419334 KRTAP9-7A8MTY7 169 aa8.21□□□□□ -1.1
EPCAM-203ENST00000419334 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.16□□□□□ -1.1
EPCAM-203ENST00000419334 NDUFC1O43677 76 aa8.14□□□□□ -1.11
EPCAM-203ENST00000419334 DMAC1Q96GE9 116 aa8.12□□□□□ -1.11
EPCAM-203ENST00000419334 USH2AO75445 5202 aa8.08□□□□□ -1.12
EPCAM-203ENST00000419334 SERP2Q8N6R1 65 aa8.06□□□□□ -1.12
EPCAM-203ENST00000419334 SSPOA2VEC9 5147 aa8.06□□□□□ -1.12
EPCAM-203ENST00000419334 H0YAA0 97 aa8.03□□□□□ -1.12
EPCAM-203ENST00000419334 SNURFQ9Y675 71 aa8.03□□□□□ -1.12
EPCAM-203ENST00000419334 KRTAP19-1Q8IUB9 90 aa8.02□□□□□ -1.13
EPCAM-203ENST00000419334 C20orf197Q8N268 126 aa7.99□□□□□ -1.13
EPCAM-203ENST00000419334 SPRR2GQ9BYE4 73 aa7.98□□□□□ -1.13
EPCAM-203ENST00000419334 ACYP2P14621 99 aa7.97□□□□□ -1.13
EPCAM-203ENST00000419334 CRIPTQ9P021 101 aa7.95□□□□□ -1.14
EPCAM-203ENST00000419334 FCGBPQ9Y6R7 5405 aaPredicted RBP7.93□□□□□ -1.14
EPCAM-203ENST00000419334 SPANXA2-OT1Q8N9U9 137 aa7.92□□□□□ -1.14
EPCAM-203ENST00000419334 KRTAP19-6Q3LI70 58 aa7.91□□□□□ -1.14
EPCAM-203ENST00000419334 ADM2Q7Z4H4 148 aa7.91□□□□□ -1.14
EPCAM-203ENST00000419334 COX7CP15954 63 aa7.89□□□□□ -1.15
EPCAM-203ENST00000419334 KRTAP19-8Q3LI54 63 aa7.88□□□□□ -1.15
EPCAM-203ENST00000419334 Q5VV11 94 aa7.84□□□□□ -1.15
EPCAM-203ENST00000419334 MT1BP07438 61 aa7.83□□□□□ -1.16
EPCAM-203ENST00000419334 SYNE2Q8WXH0 6885 aaKnown RBP7.82□□□□□ -1.16
EPCAM-203ENST00000419334 SPTSSBQ8NFR3 76 aa7.82□□□□□ -1.16
EPCAM-203ENST00000419334 MACF1Q9UPN3 7388 aaKnown RBP7.8□□□□□ -1.16
EPCAM-203ENST00000419334 CHKB-CPT1BH3BT56 60 aa7.8□□□□□ -1.16
EPCAM-203ENST00000419334 P0C880 135 aa7.77□□□□□ -1.17
EPCAM-203ENST00000419334 KRTAP3-2Q9BYR7 98 aa7.76□□□□□ -1.17
EPCAM-203ENST00000419334 ANAPC13Q9BS18 74 aa7.74□□□□□ -1.17
EPCAM-203ENST00000419334 H7BZZ5 65 aa7.71□□□□□ -1.18
EPCAM-203ENST00000419334 CYSTM1Q9H1C7 97 aa7.71□□□□□ -1.18
EPCAM-203ENST00000419334 R4GN34 69 aa7.7□□□□□ -1.18
EPCAM-203ENST00000419334 COA5Q86WW8 74 aa7.66□□□□□ -1.18
EPCAM-203ENST00000419334 M0QZ58 72 aa7.64□□□□□ -1.19
EPCAM-203ENST00000419334 A6NN06 94 aa7.63□□□□□ -1.19
EPCAM-203ENST00000419334 KRTAP10-5P60370 271 aa7.6□□□□□ -1.19
EPCAM-203ENST00000419334 CCDC179H3BU77 68 aa7.57□□□□□ -1.2
EPCAM-203ENST00000419334 PLAC4Q8WY50 150 aa7.53□□□□□ -1.2
EPCAM-203ENST00000419334 KRTAP6-3Q3LI67 103 aa7.51□□□□□ -1.21
EPCAM-203ENST00000419334 LINC01554Q52M75 96 aa7.5□□□□□ -1.21
EPCAM-203ENST00000419334 ATP5EP56381 51 aaPredicted RBP7.43□□□□□ -1.22
EPCAM-203ENST00000419334 SEC61GP60059 68 aa7.42□□□□□ -1.22
EPCAM-203ENST00000419334 PRO2289Q9P1D8 64 aa7.42□□□□□ -1.22
EPCAM-203ENST00000419334 MT1XP80297 61 aa7.41□□□□□ -1.22
EPCAM-203ENST00000419334 SERP1Q9Y6X1 66 aa7.4□□□□□ -1.22
EPCAM-203ENST00000419334 NEBP20929 6669 aa7.38□□□□□ -1.23
EPCAM-203ENST00000419334 KRTAP13-4Q3LI77 160 aa7.37□□□□□ -1.23
EPCAM-203ENST00000419334 TMEM258P61165 79 aa7.33□□□□□ -1.24
EPCAM-203ENST00000419334 A0A1B0GU33 70 aa7.27□□□□□ -1.25
EPCAM-203ENST00000419334 A0A1B0GU69 56 aa7.26□□□□□ -1.25
EPCAM-203ENST00000419334 MUC12Q9UKN1 5478 aa7.23□□□□□ -1.25
EPCAM-203ENST00000419334 SPATA8Q6RVD6 105 aa7.21□□□□□ -1.26
EPCAM-203ENST00000419334 KRTAP12-2P59991 146 aa7.2□□□□□ -1.26
EPCAM-203ENST00000419334 A0A0D9SG42 100 aa7.16□□□□□ -1.26
EPCAM-203ENST00000419334 KRTAP20-1Q3LI63 56 aa7.16□□□□□ -1.26
EPCAM-203ENST00000419334 PRR15LQ9BU68 103 aa7.13□□□□□ -1.27
EPCAM-203ENST00000419334 LINC01558Q9Y6Z2 57 aa7.13□□□□□ -1.27
EPCAM-203ENST00000419334 KRTAP5-9P26371 169 aa7.12□□□□□ -1.27
EPCAM-203ENST00000419334 CAMK2N1Q7Z7J9 78 aa7.11□□□□□ -1.27
EPCAM-203ENST00000419334 SMIM26A0A096LP01 95 aa7.07□□□□□ -1.28
EPCAM-203ENST00000419334 KRTAP10-7P60409 375 aaPredicted RBP7.07□□□□□ -1.28
EPCAM-203ENST00000419334 KRTAP12-1P59990 96 aa7.05□□□□□ -1.28
EPCAM-203ENST00000419334 KRTAP10-12P60413 245 aa7.05□□□□□ -1.28
EPCAM-203ENST00000419334 SPINT4Q6UDR6 99 aa7.04□□□□□ -1.28
EPCAM-203ENST00000419334 KRTAP8-1Q8IUC2 63 aa7.02□□□□□ -1.29
EPCAM-203ENST00000419334 MDN1Q9NU22 5596 aa7.01□□□□□ -1.29
EPCAM-203ENST00000419334 KRTAP4-8A0A0G2JLE6 195 aa6.99□□□□□ -1.29
EPCAM-203ENST00000419334 A8MU10 97 aa6.99□□□□□ -1.29
EPCAM-203ENST00000419334 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
EPCAM-203ENST00000419334 KMT2DO14686 5537 aa6.99□□□□□ -1.29
EPCAM-203ENST00000419334 SPRR2FQ96RM1 72 aa6.95□□□□□ -1.3
EPCAM-203ENST00000419334 UQCR11O14957 56 aa6.9□□□□□ -1.3
EPCAM-203ENST00000419334 PCP4P48539 62 aa6.9□□□□□ -1.3
EPCAM-203ENST00000419334 KRTAP2-3P0C7H8 128 aa6.88□□□□□ -1.31
EPCAM-203ENST00000419334 KRTAP2-4Q9BYR9 128 aa6.88□□□□□ -1.31
EPCAM-203ENST00000419334 V9GYY9 64 aa6.88□□□□□ -1.31
EPCAM-203ENST00000419334 Q1T7F1 81 aa6.85□□□□□ -1.31
EPCAM-203ENST00000419334 PSPHP1O15172 72 aa6.77□□□□□ -1.33
EPCAM-203ENST00000419334 SPRR2EP22531 72 aa6.77□□□□□ -1.33
EPCAM-203ENST00000419334 SPRR2BP35325 72 aa6.77□□□□□ -1.33
EPCAM-203ENST00000419334 SPRR2AP35326 72 aa6.77□□□□□ -1.33
EPCAM-203ENST00000419334 MIR22HGQ0VDD5 57 aa6.76□□□□□ -1.33
EPCAM-203ENST00000419334 LCE1AQ5T7P2 110 aa6.74□□□□□ -1.33
EPCAM-203ENST00000419334 RPS28P62857 69 aaKnown RBP6.73□□□□□ -1.33
EPCAM-203ENST00000419334 C10orf95Q9H7T3 257 aa6.71□□□□□ -1.34
EPCAM-203ENST00000419334 TNP1P09430 55 aa6.65□□□□□ -1.34
EPCAM-203ENST00000419334 KRTAP2-2Q9BYT5 123 aa6.63□□□□□ -1.35
EPCAM-203ENST00000419334 KRTAP2-1Q9BYU5 128 aa6.63□□□□□ -1.35
EPCAM-203ENST00000419334 KRTAP19-7Q3SYF9 63 aa6.62□□□□□ -1.35
EPCAM-203ENST00000419334 K7ERS5 55 aa6.59□□□□□ -1.35
EPCAM-203ENST00000419334 A6NED7 52 aa6.57□□□□□ -1.36
EPCAM-203ENST00000419334 MT1EP04732 61 aa6.55□□□□□ -1.36
EPCAM-203ENST00000419334 SPRR2DP22532 72 aa6.55□□□□□ -1.36
EPCAM-203ENST00000419334 KRTAP19-5Q3LI72 72 aa6.52□□□□□ -1.37
EPCAM-203ENST00000419334 LCE3AQ5TA76 89 aa6.51□□□□□ -1.37
EPCAM-203ENST00000419334 KRTAP19-3Q7Z4W3 81 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms