RNA–Protein interactions for RNA: ENST00000415495.5

CEACAM3-203, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

TSL 1 (best)

Gene CEACAM3, Length 1,640 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-203ENST00000415495 CHKB-CPT1BH3BT56 60 aa10.62□□□□□ -0.71
CEACAM3-203ENST00000415495 LCA10Q71F78 164 aa10.55□□□□□ -0.72
CEACAM3-203ENST00000415495 KRTAP3-3Q9BYR6 98 aa10.55□□□□□ -0.72
CEACAM3-203ENST00000415495 S4R3F8 94 aa10.55□□□□□ -0.72
CEACAM3-203ENST00000415495 SMIM26A0A096LP01 95 aa10.53□□□□□ -0.72
CEACAM3-203ENST00000415495 LCE2CQ5TA81 110 aa10.51□□□□□ -0.73
CEACAM3-203ENST00000415495 SPTSSBQ8NFR3 76 aa10.44□□□□□ -0.74
CEACAM3-203ENST00000415495 FLGP20930 4061 aaPredicted RBP10.41□□□□□ -0.74
CEACAM3-203ENST00000415495 Q1T7F1 81 aa10.37□□□□□ -0.75
CEACAM3-203ENST00000415495 LINC01558Q9Y6Z2 57 aa10.35□□□□□ -0.75
CEACAM3-203ENST00000415495 CSAG1Q6PB30 78 aa10.34□□□□□ -0.75
CEACAM3-203ENST00000415495 FAT4Q6V0I7 4981 aa10.33□□□□□ -0.76
CEACAM3-203ENST00000415495 V9GYY9 64 aa10.3□□□□□ -0.76
CEACAM3-203ENST00000415495 MT1HP80294 61 aa10.27□□□□□ -0.77
CEACAM3-203ENST00000415495 A0A1B0GU69 56 aa10.18□□□□□ -0.78
CEACAM3-203ENST00000415495 PRR15LQ9BU68 103 aa10.18□□□□□ -0.78
CEACAM3-203ENST00000415495 PSPHP1O15172 72 aa10.17□□□□□ -0.78
CEACAM3-203ENST00000415495 KRTAP3-2Q9BYR7 98 aa10.16□□□□□ -0.78
CEACAM3-203ENST00000415495 H0YAA0 97 aa10.13□□□□□ -0.79
CEACAM3-203ENST00000415495 SEC61GP60059 68 aa10.12□□□□□ -0.79
CEACAM3-203ENST00000415495 KRTAP10-6P60371 365 aaPredicted RBP10.12□□□□□ -0.79
CEACAM3-203ENST00000415495 Q5VV11 94 aa10.11□□□□□ -0.79
CEACAM3-203ENST00000415495 M0R2T5 61 aa10.08□□□□□ -0.8
CEACAM3-203ENST00000415495 ADM2Q7Z4H4 148 aa10.08□□□□□ -0.8
CEACAM3-203ENST00000415495 P0C880 135 aa10.05□□□□□ -0.8
CEACAM3-203ENST00000415495 LCE2AQ5TA79 106 aaPredicted RBP9.98□□□□□ -0.81
CEACAM3-203ENST00000415495 A0A1B0GU33 70 aa9.93□□□□□ -0.82
CEACAM3-203ENST00000415495 KRTAP9-8Q9BYQ0 159 aa9.91□□□□□ -0.82
CEACAM3-203ENST00000415495 LORP23490 312 aaPredicted RBP9.87□□□□□ -0.83
CEACAM3-203ENST00000415495 UQCR11O14957 56 aa9.85□□□□□ -0.83
CEACAM3-203ENST00000415495 MT2AP02795 61 aa9.85□□□□□ -0.83
CEACAM3-203ENST00000415495 A6NED7 52 aa9.83□□□□□ -0.84
CEACAM3-203ENST00000415495 KRTAP13-4Q3LI77 160 aa9.82□□□□□ -0.84
CEACAM3-203ENST00000415495 MT1FP04733 61 aa9.78□□□□□ -0.84
CEACAM3-203ENST00000415495 SPATA8Q6RVD6 105 aa9.78□□□□□ -0.84
CEACAM3-203ENST00000415495 M0QZ58 72 aa9.74□□□□□ -0.85
CEACAM3-203ENST00000415495 MIR22HGQ0VDD5 57 aa9.74□□□□□ -0.85
CEACAM3-203ENST00000415495 KRTAP10-10P60014 251 aa9.71□□□□□ -0.85
CEACAM3-203ENST00000415495 CRIPTQ9P021 101 aa9.71□□□□□ -0.85
CEACAM3-203ENST00000415495 R4GN34 69 aa9.71□□□□□ -0.86
CEACAM3-203ENST00000415495 A8MU10 97 aa9.67□□□□□ -0.86
CEACAM3-203ENST00000415495 CDC42SE1Q9NRR8 79 aa9.67□□□□□ -0.86
CEACAM3-203ENST00000415495 BRK1Q8WUW1 75 aa9.63□□□□□ -0.87
CEACAM3-203ENST00000415495 KRTAP19-1Q8IUB9 90 aa9.6□□□□□ -0.87
CEACAM3-203ENST00000415495 SPRR2GQ9BYE4 73 aa9.58□□□□□ -0.88
CEACAM3-203ENST00000415495 A0A0D9SG42 100 aa9.56□□□□□ -0.88
CEACAM3-203ENST00000415495 KRTAP9-3Q9BYQ3 159 aa9.56□□□□□ -0.88
CEACAM3-203ENST00000415495 LINC01554Q52M75 96 aa9.51□□□□□ -0.89
CEACAM3-203ENST00000415495 KRTAP12-1P59990 96 aa9.42□□□□□ -0.9
CEACAM3-203ENST00000415495 A6NN06 94 aa9.39□□□□□ -0.91
CEACAM3-203ENST00000415495 KRTAP12-2P59991 146 aa9.38□□□□□ -0.91
CEACAM3-203ENST00000415495 PRO0628Q9UI54 55 aa9.38□□□□□ -0.91
CEACAM3-203ENST00000415495 KRTAP19-8Q3LI54 63 aa9.37□□□□□ -0.91
CEACAM3-203ENST00000415495 SPINT4Q6UDR6 99 aa9.34□□□□□ -0.91
CEACAM3-203ENST00000415495 LCE2BO14633 110 aa9.31□□□□□ -0.92
CEACAM3-203ENST00000415495 K7ERS5 55 aa9.26□□□□□ -0.93
CEACAM3-203ENST00000415495 MT1BP07438 61 aa9.26□□□□□ -0.93
CEACAM3-203ENST00000415495 PLAC4Q8WY50 150 aa9.17□□□□□ -0.94
CEACAM3-203ENST00000415495 PMAIP1Q13794 54 aa9.11□□□□□ -0.95
CEACAM3-203ENST00000415495 LCE2DQ5TA82 110 aaPredicted RBP9.1□□□□□ -0.95
CEACAM3-203ENST00000415495 USH2AO75445 5202 aa9.09□□□□□ -0.95
CEACAM3-203ENST00000415495 CAMK2N1Q7Z7J9 78 aa9.06□□□□□ -0.96
CEACAM3-203ENST00000415495 C10orf95Q9H7T3 257 aa8.94□□□□□ -0.98
CEACAM3-203ENST00000415495 MT1XP80297 61 aa8.92□□□□□ -0.98
CEACAM3-203ENST00000415495 ROMO1P60602 79 aa8.91□□□□□ -0.98
CEACAM3-203ENST00000415495 KRTAP10-5P60370 271 aa8.91□□□□□ -0.98
CEACAM3-203ENST00000415495 SSPOA2VEC9 5147 aa8.8□□□□□ -1
CEACAM3-203ENST00000415495 KRTAP9-2Q9BYQ4 174 aa8.78□□□□□ -1
CEACAM3-203ENST00000415495 PRO2289Q9P1D8 64 aa8.76□□□□□ -1.01
CEACAM3-203ENST00000415495 KRTAP19-6Q3LI70 58 aa8.75□□□□□ -1.01
CEACAM3-203ENST00000415495 FSIP2Q5CZC0 6907 aa8.74□□□□□ -1.01
CEACAM3-203ENST00000415495 KTN1-AS1Q86SY8 53 aa8.69□□□□□ -1.02
CEACAM3-203ENST00000415495 KRTAP25-1Q3LHN0 102 aa8.63□□□□□ -1.03
CEACAM3-203ENST00000415495 TNP1P09430 55 aa8.62□□□□□ -1.03
CEACAM3-203ENST00000415495 PRAC1Q96KF2 57 aa8.58□□□□□ -1.04
CEACAM3-203ENST00000415495 KRTAP10-7P60409 375 aaPredicted RBP8.54□□□□□ -1.04
CEACAM3-203ENST00000415495 FCGBPQ9Y6R7 5405 aaPredicted RBP8.48□□□□□ -1.05
CEACAM3-203ENST00000415495 KRTAP10-12P60413 245 aa8.46□□□□□ -1.06
CEACAM3-203ENST00000415495 CRCT1Q9UGL9 99 aa8.45□□□□□ -1.06
CEACAM3-203ENST00000415495 KRTAP23-1A1A580 65 aa8.36□□□□□ -1.07
CEACAM3-203ENST00000415495 LCE3AQ5TA76 89 aa8.32□□□□□ -1.08
CEACAM3-203ENST00000415495 PP632Q6XCG6 107 aa8.29□□□□□ -1.08
CEACAM3-203ENST00000415495 KRTAP4-8A0A0G2JLE6 195 aa8.25□□□□□ -1.09
CEACAM3-203ENST00000415495 KRTAP4-8Q9BYQ9 185 aa8.25□□□□□ -1.09
CEACAM3-203ENST00000415495 KMT2DO14686 5537 aa8.22□□□□□ -1.09
CEACAM3-203ENST00000415495 KRTAP8-1Q8IUC2 63 aa8.17□□□□□ -1.1
CEACAM3-203ENST00000415495 KRTAP9-6A0A140TA67 174 aa8.13□□□□□ -1.11
CEACAM3-203ENST00000415495 MACF1Q9UPN3 7388 aaKnown RBP8.06□□□□□ -1.12
CEACAM3-203ENST00000415495 KRTAP19-5Q3LI72 72 aa8.01□□□□□ -1.13
CEACAM3-203ENST00000415495 KRTAP12-3P60328 96 aa7.98□□□□□ -1.13
CEACAM3-203ENST00000415495 KRTAP19-7Q3SYF9 63 aa7.97□□□□□ -1.13
CEACAM3-203ENST00000415495 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.83□□□□□ -1.16
CEACAM3-203ENST00000415495 MT1EP04732 61 aa7.82□□□□□ -1.16
CEACAM3-203ENST00000415495 SYNE2Q8WXH0 6885 aaKnown RBP7.82□□□□□ -1.16
CEACAM3-203ENST00000415495 KRTAP15-1Q3LI76 137 aa7.81□□□□□ -1.16
CEACAM3-203ENST00000415495 H3BS24 57 aa7.76□□□□□ -1.17
CEACAM3-203ENST00000415495 KRTAP5-9P26371 169 aa7.72□□□□□ -1.17
CEACAM3-203ENST00000415495 SPRR2FQ96RM1 72 aa7.71□□□□□ -1.17
CEACAM3-203ENST00000415495 MUC12Q9UKN1 5478 aa7.65□□□□□ -1.18
CEACAM3-203ENST00000415495 MT1LQ93083 61 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms