RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 A0A1B0GU33 70 aa11.37□□□□□ -0.59
AP1S3-205ENST00000415298 BIRC6Q9NR09 4857 aa11.35□□□□□ -0.59
AP1S3-205ENST00000415298 TPRXLQ17RH7 258 aa11.34□□□□□ -0.59
AP1S3-205ENST00000415298 IGKV2D-30A0A075B6S6 120 aa11.32□□□□□ -0.6
AP1S3-205ENST00000415298 SPINK1P00995 79 aa11.32□□□□□ -0.6
AP1S3-205ENST00000415298 Q8N1X5 172 aa11.31□□□□□ -0.6
AP1S3-205ENST00000415298 KRTAP4-5Q9BYR2 181 aa11.28□□□□□ -0.6
AP1S3-205ENST00000415298 H1FX-AS1Q4G0G2 97 aa11.27□□□□□ -0.61
AP1S3-205ENST00000415298 SPINK6Q6UWN8 80 aa11.27□□□□□ -0.61
AP1S3-205ENST00000415298 KRTAP1-4P0C5Y4 121 aa11.24□□□□□ -0.61
AP1S3-205ENST00000415298 LRP1Q07954 4544 aaKnown RBP11.22□□□□□ -0.61
AP1S3-205ENST00000415298 TYMSOSQ8TAI1 123 aa11.17□□□□□ -0.62
AP1S3-205ENST00000415298 MYCBP2O75592 4640 aa11.16□□□□□ -0.62
AP1S3-205ENST00000415298 HERC2O95714 4834 aa11.16□□□□□ -0.62
AP1S3-205ENST00000415298 PKHD1L1Q86WI1 4243 aa11.15□□□□□ -0.62
AP1S3-205ENST00000415298 KRTAP13-2Q52LG2 175 aa11.14□□□□□ -0.63
AP1S3-205ENST00000415298 ABCA13Q86UQ4 5058 aa11.09□□□□□ -0.63
AP1S3-205ENST00000415298 C10orf95Q9H7T3 257 aa11.06□□□□□ -0.64
AP1S3-205ENST00000415298 FAT3Q8TDW7 4589 aa11.05□□□□□ -0.64
AP1S3-205ENST00000415298 TNXBP22105 4242 aa11□□□□□ -0.65
AP1S3-205ENST00000415298 KRTAP10-8P60410 259 aa10.94□□□□□ -0.66
AP1S3-205ENST00000415298 RPL37P61927 97 aaKnown RBP10.93□□□□□ -0.66
AP1S3-205ENST00000415298 DMBT1Q9UGM3 2413 aaPredicted RBP10.91□□□□□ -0.66
AP1S3-205ENST00000415298 MT1HL1P0DM35 61 aa10.91□□□□□ -0.66
AP1S3-205ENST00000415298 COX6B2Q6YFQ2 88 aa10.91□□□□□ -0.66
AP1S3-205ENST00000415298 PCLOQ9Y6V0 5065 aa10.89□□□□□ -0.67
AP1S3-205ENST00000415298 J3QL48 77 aa10.72□□□□□ -0.69
AP1S3-205ENST00000415298 RPS29P62273 56 aaKnown RBP10.65□□□□□ -0.7
AP1S3-205ENST00000415298 HERC1Q15751 4861 aa10.58□□□□□ -0.72
AP1S3-205ENST00000415298 A0A0D9SG42 100 aa10.57□□□□□ -0.72
AP1S3-205ENST00000415298 CAMK2N1Q7Z7J9 78 aa10.55□□□□□ -0.72
AP1S3-205ENST00000415298 KRTAP3-1Q9BYR8 98 aa10.53□□□□□ -0.72
AP1S3-205ENST00000415298 KRTAP13-4Q3LI77 160 aa10.49□□□□□ -0.73
AP1S3-205ENST00000415298 XP32Q5T750 250 aa10.48□□□□□ -0.73
AP1S3-205ENST00000415298 LPAP08519 4548 aa10.47□□□□□ -0.73
AP1S3-205ENST00000415298 S4R3F8 94 aa10.47□□□□□ -0.73
AP1S3-205ENST00000415298 PLAC4Q8WY50 150 aa10.45□□□□□ -0.74
AP1S3-205ENST00000415298 KRTAP3-2Q9BYR7 98 aa10.44□□□□□ -0.74
AP1S3-205ENST00000415298 C9orf92A6NGG3 77 aa10.43□□□□□ -0.74
AP1S3-205ENST00000415298 KRTAP10-6P60371 365 aaPredicted RBP10.4□□□□□ -0.75
AP1S3-205ENST00000415298 LRP2P98164 4655 aa10.31□□□□□ -0.76
AP1S3-205ENST00000415298 KRTAP12-2P59991 146 aa10.3□□□□□ -0.76
AP1S3-205ENST00000415298 HMCN2Q8NDA2 5059 aa10.28□□□□□ -0.76
AP1S3-205ENST00000415298 KRTAP12-1P59990 96 aa10.13□□□□□ -0.79
AP1S3-205ENST00000415298 PRO2289Q9P1D8 64 aa10.1□□□□□ -0.79
AP1S3-205ENST00000415298 KRTAP3-3Q9BYR6 98 aa9.98□□□□□ -0.81
AP1S3-205ENST00000415298 UBR4Q5T4S7 5183 aa9.98□□□□□ -0.81
AP1S3-205ENST00000415298 MUC2Q02817 5179 aa9.97□□□□□ -0.81
AP1S3-205ENST00000415298 KRTAP4-1Q9BYQ7 146 aa9.87□□□□□ -0.83
AP1S3-205ENST00000415298 MUC17Q685J3 4493 aa9.86□□□□□ -0.83
AP1S3-205ENST00000415298 RNF213Q63HN8 5207 aa9.84□□□□□ -0.83
AP1S3-205ENST00000415298 R4GN34 69 aa9.72□□□□□ -0.85
AP1S3-205ENST00000415298 M0QZ58 72 aa9.68□□□□□ -0.86
AP1S3-205ENST00000415298 PP632Q6XCG6 107 aa9.61□□□□□ -0.87
AP1S3-205ENST00000415298 INE1O15225 51 aa9.6□□□□□ -0.87
AP1S3-205ENST00000415298 FAT4Q6V0I7 4981 aa9.54□□□□□ -0.88
AP1S3-205ENST00000415298 SPRR5A0A1B0GTR4 108 aa9.5□□□□□ -0.89
AP1S3-205ENST00000415298 KRTAP19-2Q3LHN2 52 aa9.5□□□□□ -0.89
AP1S3-205ENST00000415298 LCE2CQ5TA81 110 aa9.4□□□□□ -0.9
AP1S3-205ENST00000415298 FLGP20930 4061 aaPredicted RBP9.29□□□□□ -0.92
AP1S3-205ENST00000415298 MT1HP80294 61 aa9.22□□□□□ -0.93
AP1S3-205ENST00000415298 M0R2T5 61 aa9.09□□□□□ -0.95
AP1S3-205ENST00000415298 LCE2AQ5TA79 106 aaPredicted RBP9.05□□□□□ -0.96
AP1S3-205ENST00000415298 KRTAP23-1A1A580 65 aa8.92□□□□□ -0.98
AP1S3-205ENST00000415298 LORP23490 312 aaPredicted RBP8.87□□□□□ -0.99
AP1S3-205ENST00000415298 KRTAP9-8Q9BYQ0 159 aa8.85□□□□□ -0.99
AP1S3-205ENST00000415298 MT2AP02795 61 aa8.78□□□□□ -1
AP1S3-205ENST00000415298 MT1FP04733 61 aa8.74□□□□□ -1.01
AP1S3-205ENST00000415298 TNP1P09430 55 aa8.69□□□□□ -1.02
AP1S3-205ENST00000415298 KRTAP10-10P60014 251 aa8.69□□□□□ -1.02
AP1S3-205ENST00000415298 KRTAP9-3Q9BYQ3 159 aa8.52□□□□□ -1.04
AP1S3-205ENST00000415298 KRTAP19-1Q8IUB9 90 aa8.47□□□□□ -1.05
AP1S3-205ENST00000415298 SPRR2GQ9BYE4 73 aa8.4□□□□□ -1.06
AP1S3-205ENST00000415298 LCE2BO14633 110 aa8.38□□□□□ -1.07
AP1S3-205ENST00000415298 FSIP2Q5CZC0 6907 aa8.35□□□□□ -1.07
AP1S3-205ENST00000415298 USH2AO75445 5202 aa8.34□□□□□ -1.07
AP1S3-205ENST00000415298 LCE2DQ5TA82 110 aaPredicted RBP8.25□□□□□ -1.09
AP1S3-205ENST00000415298 KRTAP19-8Q3LI54 63 aa8.21□□□□□ -1.1
AP1S3-205ENST00000415298 MT1BP07438 61 aa8.2□□□□□ -1.1
AP1S3-205ENST00000415298 KRTAP9-2Q9BYQ4 174 aa8.19□□□□□ -1.1
AP1S3-205ENST00000415298 SSPOA2VEC9 5147 aa8.07□□□□□ -1.12
AP1S3-205ENST00000415298 LCE3AQ5TA76 89 aa8□□□□□ -1.13
AP1S3-205ENST00000415298 MT1XP80297 61 aa7.87□□□□□ -1.15
AP1S3-205ENST00000415298 KRTAP10-5P60370 271 aa7.85□□□□□ -1.15
AP1S3-205ENST00000415298 KRTAP10-12P60413 245 aa7.85□□□□□ -1.15
AP1S3-205ENST00000415298 KRTAP19-6Q3LI70 58 aa7.84□□□□□ -1.15
AP1S3-205ENST00000415298 KRTAP8-1Q8IUC2 63 aa7.84□□□□□ -1.15
AP1S3-205ENST00000415298 CRCT1Q9UGL9 99 aa7.83□□□□□ -1.16
AP1S3-205ENST00000415298 FCGBPQ9Y6R7 5405 aaPredicted RBP7.76□□□□□ -1.17
AP1S3-205ENST00000415298 KRTAP9-6A0A140TA67 174 aa7.61□□□□□ -1.19
AP1S3-205ENST00000415298 KRTAP10-7P60409 375 aaPredicted RBP7.58□□□□□ -1.2
AP1S3-205ENST00000415298 KMT2DO14686 5537 aa7.58□□□□□ -1.2
AP1S3-205ENST00000415298 KRTAP12-3P60328 96 aa7.57□□□□□ -1.2
AP1S3-205ENST00000415298 MACF1Q9UPN3 7388 aaKnown RBP7.5□□□□□ -1.21
AP1S3-205ENST00000415298 KRTAP4-8A0A0G2JLE6 195 aa7.42□□□□□ -1.22
AP1S3-205ENST00000415298 KRTAP4-8Q9BYQ9 185 aa7.42□□□□□ -1.22
AP1S3-205ENST00000415298 KRTAP2-3P0C7H8 128 aa7.39□□□□□ -1.23
AP1S3-205ENST00000415298 KRTAP2-4Q9BYR9 128 aa7.39□□□□□ -1.23
AP1S3-205ENST00000415298 KRTAP2-1Q9BYU5 128 aa7.39□□□□□ -1.23
AP1S3-205ENST00000415298 SYNE2Q8WXH0 6885 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms