RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 COA5Q86WW8 74 aa5.52□□□□□ -1.53
DDB1-202ENST00000414411 Q8N9P0 234 aaPredicted RBP5.52□□□□□ -1.53
DDB1-202ENST00000414411 KRTAP16-1A8MUX0 517 aa5.52□□□□□ -1.53
DDB1-202ENST00000414411 LPAP08519 4548 aa5.48□□□□□ -1.53
DDB1-202ENST00000414411 LRP2P98164 4655 aa5.48□□□□□ -1.53
DDB1-202ENST00000414411 KRTAP19-1Q8IUB9 90 aa5.46□□□□□ -1.53
DDB1-202ENST00000414411 HRES1P13985 223 aa5.46□□□□□ -1.54
DDB1-202ENST00000414411 TPRXLQ17RH7 258 aa5.45□□□□□ -1.54
DDB1-202ENST00000414411 IGKV2-30P06310 120 aa5.44□□□□□ -1.54
DDB1-202ENST00000414411 Q5VV11 94 aa5.43□□□□□ -1.54
DDB1-202ENST00000414411 PRR15LQ9BU68 103 aa5.4□□□□□ -1.54
DDB1-202ENST00000414411 DMAC1Q96GE9 116 aa5.4□□□□□ -1.55
DDB1-202ENST00000414411 C9orf92A6NGG3 77 aa5.39□□□□□ -1.55
DDB1-202ENST00000414411 A6NN06 94 aa5.38□□□□□ -1.55
DDB1-202ENST00000414411 ACYP2P14621 99 aa5.38□□□□□ -1.55
DDB1-202ENST00000414411 LINC01558Q9Y6Z2 57 aa5.38□□□□□ -1.55
DDB1-202ENST00000414411 ATP11AUNQ6ZP68 121 aa5.37□□□□□ -1.55
DDB1-202ENST00000414411 KRTAP4-12Q9BQ66 201 aa5.37□□□□□ -1.55
DDB1-202ENST00000414411 KRTAP4-8Q9BYQ9 185 aa5.37□□□□□ -1.55
DDB1-202ENST00000414411 CHKB-CPT1BH3BT56 60 aa5.36□□□□□ -1.55
DDB1-202ENST00000414411 ADM2Q7Z4H4 148 aa5.36□□□□□ -1.55
DDB1-202ENST00000414411 IGKV2D-30A0A075B6S6 120 aa5.36□□□□□ -1.55
DDB1-202ENST00000414411 UBR4Q5T4S7 5183 aa5.34□□□□□ -1.55
DDB1-202ENST00000414411 LUZP6Q538Z0 58 aa5.33□□□□□ -1.56
DDB1-202ENST00000414411 LCE4AQ5TA78 99 aa5.33□□□□□ -1.56
DDB1-202ENST00000414411 C20orf166-AS1Q96NR2 134 aa5.32□□□□□ -1.56
DDB1-202ENST00000414411 A8MUU9 505 aa5.31□□□□□ -1.56
DDB1-202ENST00000414411 KRTAP9-6A0A140TA67 174 aa5.31□□□□□ -1.56
DDB1-202ENST00000414411 KRTAP9-7A8MTY7 169 aa5.31□□□□□ -1.56
DDB1-202ENST00000414411 A8MU10 97 aa5.3□□□□□ -1.56
DDB1-202ENST00000414411 KRTAP9-2Q9BYQ4 174 aa5.3□□□□□ -1.56
DDB1-202ENST00000414411 A6NED7 52 aa5.29□□□□□ -1.56
DDB1-202ENST00000414411 RPL37P61927 97 aaKnown RBP5.29□□□□□ -1.56
DDB1-202ENST00000414411 MUC17Q685J3 4493 aa5.28□□□□□ -1.56
DDB1-202ENST00000414411 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.27□□□□□ -1.57
DDB1-202ENST00000414411 K7ERS5 55 aa5.25□□□□□ -1.57
DDB1-202ENST00000414411 RNF213Q63HN8 5207 aa5.25□□□□□ -1.57
DDB1-202ENST00000414411 CDC42SE1Q9NRR8 79 aa5.25□□□□□ -1.57
DDB1-202ENST00000414411 SPINK7P58062 85 aa5.24□□□□□ -1.57
DDB1-202ENST00000414411 CAMK2N1Q7Z7J9 78 aa5.24□□□□□ -1.57
DDB1-202ENST00000414411 MUC2Q02817 5179 aa5.24□□□□□ -1.57
DDB1-202ENST00000414411 A0A1B0GU69 56 aa5.21□□□□□ -1.58
DDB1-202ENST00000414411 KRTAP4-1Q9BYQ7 146 aa5.19□□□□□ -1.58
DDB1-202ENST00000414411 SPTSSBQ8NFR3 76 aa5.18□□□□□ -1.58
DDB1-202ENST00000414411 ROMO1P60602 79 aa5.14□□□□□ -1.59
DDB1-202ENST00000414411 LCE3BQ5TA77 95 aa5.14□□□□□ -1.59
DDB1-202ENST00000414411 KRTAP9-9Q9BYP9 154 aa5.11□□□□□ -1.59
DDB1-202ENST00000414411 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
DDB1-202ENST00000414411 UQCR11O14957 56 aa5.1□□□□□ -1.59
DDB1-202ENST00000414411 SPATA8Q6RVD6 105 aa5.09□□□□□ -1.59
DDB1-202ENST00000414411 KRTAP15-1Q3LI76 137 aa5.08□□□□□ -1.6
DDB1-202ENST00000414411 COX6B2Q6YFQ2 88 aa5.08□□□□□ -1.6
DDB1-202ENST00000414411 MIR22HGQ0VDD5 57 aa5.07□□□□□ -1.6
DDB1-202ENST00000414411 FAT4Q6V0I7 4981 aa5.06□□□□□ -1.6
DDB1-202ENST00000414411 KRTAP19-2Q3LHN2 52 aa5.05□□□□□ -1.6
DDB1-202ENST00000414411 KRTAP9-3Q9BYQ3 159 aa5.03□□□□□ -1.6
DDB1-202ENST00000414411 FLGP20930 4061 aaPredicted RBP5□□□□□ -1.61
DDB1-202ENST00000414411 H0YAA0 97 aa4.95□□□□□ -1.62
DDB1-202ENST00000414411 A0A1B0GU33 70 aa4.95□□□□□ -1.62
DDB1-202ENST00000414411 H1FX-AS1Q4G0G2 97 aa4.94□□□□□ -1.62
DDB1-202ENST00000414411 P0C880 135 aa4.93□□□□□ -1.62
DDB1-202ENST00000414411 S4R3F8 94 aa4.9□□□□□ -1.62
DDB1-202ENST00000414411 MT1HP80294 61 aa4.89□□□□□ -1.63
DDB1-202ENST00000414411 KRTAP9-8Q9BYQ0 159 aa4.89□□□□□ -1.63
DDB1-202ENST00000414411 KRTAP10-6P60371 365 aaPredicted RBP4.85□□□□□ -1.63
DDB1-202ENST00000414411 NDUFAF8A1L188 74 aa4.82□□□□□ -1.64
DDB1-202ENST00000414411 KRTAP4-8A0A0G2JLE6 195 aa4.82□□□□□ -1.64
DDB1-202ENST00000414411 LCE1DQ5T752 114 aa4.82□□□□□ -1.64
DDB1-202ENST00000414411 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
DDB1-202ENST00000414411 CSAG1Q6PB30 78 aa4.82□□□□□ -1.64
DDB1-202ENST00000414411 M0R2T5 61 aa4.78□□□□□ -1.64
DDB1-202ENST00000414411 KRTAP13-4Q3LI77 160 aa4.78□□□□□ -1.64
DDB1-202ENST00000414411 KRTAP5-3Q6L8H2 238 aa4.77□□□□□ -1.65
DDB1-202ENST00000414411 KRTAP25-1Q3LHN0 102 aa4.72□□□□□ -1.65
DDB1-202ENST00000414411 A0A0D9SG42 100 aa4.71□□□□□ -1.66
DDB1-202ENST00000414411 MT2AP02795 61 aa4.65□□□□□ -1.67
DDB1-202ENST00000414411 M0QZ58 72 aa4.64□□□□□ -1.67
DDB1-202ENST00000414411 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
DDB1-202ENST00000414411 MT1FP04733 61 aa4.62□□□□□ -1.67
DDB1-202ENST00000414411 KRTAP12-2P59991 146 aa4.62□□□□□ -1.67
DDB1-202ENST00000414411 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
DDB1-202ENST00000414411 KRTAP12-1P59990 96 aa4.6□□□□□ -1.67
DDB1-202ENST00000414411 KRTAP10-10P60014 251 aa4.58□□□□□ -1.68
DDB1-202ENST00000414411 SPINT4Q6UDR6 99 aa4.56□□□□□ -1.68
DDB1-202ENST00000414411 CRIPTQ9P021 101 aa4.56□□□□□ -1.68
DDB1-202ENST00000414411 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
DDB1-202ENST00000414411 R4GN34 69 aa4.54□□□□□ -1.68
DDB1-202ENST00000414411 FSIP2Q5CZC0 6907 aa4.54□□□□□ -1.68
DDB1-202ENST00000414411 PRO2289Q9P1D8 64 aa4.5□□□□□ -1.69
DDB1-202ENST00000414411 SPRR2GQ9BYE4 73 aa4.45□□□□□ -1.7
DDB1-202ENST00000414411 C10orf95Q9H7T3 257 aa4.44□□□□□ -1.7
DDB1-202ENST00000414411 USH2AO75445 5202 aa4.43□□□□□ -1.7
DDB1-202ENST00000414411 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
DDB1-202ENST00000414411 KRTAP19-8Q3LI54 63 aa4.37□□□□□ -1.71
DDB1-202ENST00000414411 CRCT1Q9UGL9 99 aa4.36□□□□□ -1.71
DDB1-202ENST00000414411 SSPOA2VEC9 5147 aa4.34□□□□□ -1.71
DDB1-202ENST00000414411 MT1BP07438 61 aa4.33□□□□□ -1.72
DDB1-202ENST00000414411 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
DDB1-202ENST00000414411 KRTAP19-6Q3LI70 58 aa4.23□□□□□ -1.73
DDB1-202ENST00000414411 PLAC4Q8WY50 150 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms