RNA–Protein interactions for RNA: ENST00000411549.5

ACAA1-203, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 1 (best)

Gene ACAA1, Length 1,944 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-203ENST00000411549 HMCN2Q8NDA2 5059 aa10.65□□□□□ -0.7
ACAA1-203ENST00000411549 KRTAP3-1Q9BYR8 98 aa10.64□□□□□ -0.71
ACAA1-203ENST00000411549 TPRXLQ17RH7 258 aa10.59□□□□□ -0.71
ACAA1-203ENST00000411549 A6NN06 94 aa10.58□□□□□ -0.72
ACAA1-203ENST00000411549 LPAP08519 4548 aa10.57□□□□□ -0.72
ACAA1-203ENST00000411549 SPATA8Q6RVD6 105 aa10.54□□□□□ -0.72
ACAA1-203ENST00000411549 UQCR11O14957 56 aa10.52□□□□□ -0.72
ACAA1-203ENST00000411549 COX6B2Q6YFQ2 88 aa10.51□□□□□ -0.73
ACAA1-203ENST00000411549 RPL37P61927 97 aaKnown RBP10.5□□□□□ -0.73
ACAA1-203ENST00000411549 LRP2P98164 4655 aa10.47□□□□□ -0.73
ACAA1-203ENST00000411549 MIR22HGQ0VDD5 57 aa10.47□□□□□ -0.73
ACAA1-203ENST00000411549 XP32Q5T750 250 aa10.46□□□□□ -0.73
ACAA1-203ENST00000411549 SEC61GP60059 68 aa10.45□□□□□ -0.74
ACAA1-203ENST00000411549 KTN1-AS1Q86SY8 53 aa10.43□□□□□ -0.74
ACAA1-203ENST00000411549 H0YAA0 97 aa10.24□□□□□ -0.77
ACAA1-203ENST00000411549 SEC61BP60468 96 aaKnown RBP10.24□□□□□ -0.77
ACAA1-203ENST00000411549 MUC17Q685J3 4493 aa10.24□□□□□ -0.77
ACAA1-203ENST00000411549 UBR4Q5T4S7 5183 aa10.23□□□□□ -0.77
ACAA1-203ENST00000411549 A0A1B0GU33 70 aa10.23□□□□□ -0.77
ACAA1-203ENST00000411549 H1FX-AS1Q4G0G2 97 aa10.22□□□□□ -0.77
ACAA1-203ENST00000411549 KRTAP3-3Q9BYR6 98 aa10.22□□□□□ -0.77
ACAA1-203ENST00000411549 S4R3F8 94 aa10.12□□□□□ -0.79
ACAA1-203ENST00000411549 KRTAP10-6P60371 365 aaPredicted RBP10.06□□□□□ -0.8
ACAA1-203ENST00000411549 RBM12B-AS1Q9P1G2 102 aa10.05□□□□□ -0.8
ACAA1-203ENST00000411549 RNF213Q63HN8 5207 aa10.03□□□□□ -0.8
ACAA1-203ENST00000411549 KRTAP4-1Q9BYQ7 146 aa10.02□□□□□ -0.81
ACAA1-203ENST00000411549 KRTAP3-2Q9BYR7 98 aa10.02□□□□□ -0.81
ACAA1-203ENST00000411549 ADM2Q7Z4H4 148 aa10.01□□□□□ -0.81
ACAA1-203ENST00000411549 PRAC1Q96KF2 57 aa9.99□□□□□ -0.81
ACAA1-203ENST00000411549 MUC2Q02817 5179 aa9.99□□□□□ -0.81
ACAA1-203ENST00000411549 KRTAP13-4Q3LI77 160 aa9.88□□□□□ -0.83
ACAA1-203ENST00000411549 P0C880 135 aa9.86□□□□□ -0.83
ACAA1-203ENST00000411549 K7ERS5 55 aa9.82□□□□□ -0.84
ACAA1-203ENST00000411549 CSAG1Q6PB30 78 aa9.8□□□□□ -0.84
ACAA1-203ENST00000411549 KRTAP19-2Q3LHN2 52 aa9.72□□□□□ -0.85
ACAA1-203ENST00000411549 A0A0D9SG42 100 aa9.71□□□□□ -0.86
ACAA1-203ENST00000411549 FAT4Q6V0I7 4981 aa9.67□□□□□ -0.86
ACAA1-203ENST00000411549 LCE2CQ5TA81 110 aa9.65□□□□□ -0.86
ACAA1-203ENST00000411549 LINC01554Q52M75 96 aa9.6□□□□□ -0.87
ACAA1-203ENST00000411549 M0QZ58 72 aa9.59□□□□□ -0.87
ACAA1-203ENST00000411549 ROMO1P60602 79 aa9.58□□□□□ -0.88
ACAA1-203ENST00000411549 KRTAP25-1Q3LHN0 102 aa9.57□□□□□ -0.88
ACAA1-203ENST00000411549 KRTAP12-2P59991 146 aa9.53□□□□□ -0.88
ACAA1-203ENST00000411549 KRTAP12-1P59990 96 aa9.51□□□□□ -0.89
ACAA1-203ENST00000411549 LCE2AQ5TA79 106 aaPredicted RBP9.51□□□□□ -0.89
ACAA1-203ENST00000411549 MT1HP80294 61 aa9.5□□□□□ -0.89
ACAA1-203ENST00000411549 FLGP20930 4061 aaPredicted RBP9.46□□□□□ -0.89
ACAA1-203ENST00000411549 SPINT4Q6UDR6 99 aa9.41□□□□□ -0.9
ACAA1-203ENST00000411549 CRIPTQ9P021 101 aa9.41□□□□□ -0.9
ACAA1-203ENST00000411549 M0R2T5 61 aa9.39□□□□□ -0.91
ACAA1-203ENST00000411549 R4GN34 69 aa9.35□□□□□ -0.91
ACAA1-203ENST00000411549 LORP23490 312 aaPredicted RBP9.31□□□□□ -0.92
ACAA1-203ENST00000411549 C10orf95Q9H7T3 257 aa9.17□□□□□ -0.94
ACAA1-203ENST00000411549 KRTAP9-8Q9BYQ0 159 aa9.07□□□□□ -0.96
ACAA1-203ENST00000411549 MT2AP02795 61 aa9□□□□□ -0.97
ACAA1-203ENST00000411549 MT1FP04733 61 aa8.93□□□□□ -0.98
ACAA1-203ENST00000411549 KRTAP10-10P60014 251 aa8.92□□□□□ -0.98
ACAA1-203ENST00000411549 LCE2DQ5TA82 110 aaPredicted RBP8.84□□□□□ -1
ACAA1-203ENST00000411549 CAMK2N1Q7Z7J9 78 aa8.82□□□□□ -1
ACAA1-203ENST00000411549 KRTAP9-2Q9BYQ4 174 aa8.78□□□□□ -1
ACAA1-203ENST00000411549 KRTAP9-3Q9BYQ3 159 aa8.77□□□□□ -1.01
ACAA1-203ENST00000411549 SPRR2GQ9BYE4 73 aa8.72□□□□□ -1.01
ACAA1-203ENST00000411549 KRTAP15-1Q3LI76 137 aa8.67□□□□□ -1.02
ACAA1-203ENST00000411549 KRTAP19-1Q8IUB9 90 aa8.66□□□□□ -1.02
ACAA1-203ENST00000411549 PP632Q6XCG6 107 aa8.61□□□□□ -1.03
ACAA1-203ENST00000411549 LCE2BO14633 110 aa8.6□□□□□ -1.03
ACAA1-203ENST00000411549 TNP1P09430 55 aa8.51□□□□□ -1.05
ACAA1-203ENST00000411549 PLAC4Q8WY50 150 aa8.51□□□□□ -1.05
ACAA1-203ENST00000411549 USH2AO75445 5202 aa8.46□□□□□ -1.06
ACAA1-203ENST00000411549 KRTAP23-1A1A580 65 aa8.45□□□□□ -1.06
ACAA1-203ENST00000411549 FSIP2Q5CZC0 6907 aa8.43□□□□□ -1.06
ACAA1-203ENST00000411549 KRTAP19-8Q3LI54 63 aa8.42□□□□□ -1.06
ACAA1-203ENST00000411549 CRCT1Q9UGL9 99 aa8.38□□□□□ -1.07
ACAA1-203ENST00000411549 MT1BP07438 61 aa8.35□□□□□ -1.07
ACAA1-203ENST00000411549 H3BS24 57 aa8.31□□□□□ -1.08
ACAA1-203ENST00000411549 KRTAP9-6A0A140TA67 174 aa8.29□□□□□ -1.08
ACAA1-203ENST00000411549 NDUFAF8A1L188 74 aa8.27□□□□□ -1.09
ACAA1-203ENST00000411549 SSPOA2VEC9 5147 aa8.27□□□□□ -1.09
ACAA1-203ENST00000411549 KRTAP19-6Q3LI70 58 aa8.23□□□□□ -1.09
ACAA1-203ENST00000411549 KRTAP10-5P60370 271 aa8.13□□□□□ -1.11
ACAA1-203ENST00000411549 MT1XP80297 61 aa8.13□□□□□ -1.11
ACAA1-203ENST00000411549 LCE3AQ5TA76 89 aa8.09□□□□□ -1.11
ACAA1-203ENST00000411549 FCGBPQ9Y6R7 5405 aaPredicted RBP8.02□□□□□ -1.13
ACAA1-203ENST00000411549 SPRR5A0A1B0GTR4 108 aa7.97□□□□□ -1.13
ACAA1-203ENST00000411549 PRO2289Q9P1D8 64 aa7.97□□□□□ -1.13
ACAA1-203ENST00000411549 KRTAP8-1Q8IUC2 63 aa7.95□□□□□ -1.14
ACAA1-203ENST00000411549 LUZP6Q538Z0 58 aa7.91□□□□□ -1.14
ACAA1-203ENST00000411549 KRTAP10-12P60413 245 aa7.88□□□□□ -1.15
ACAA1-203ENST00000411549 KRTAP10-7P60409 375 aaPredicted RBP7.85□□□□□ -1.15
ACAA1-203ENST00000411549 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.78□□□□□ -1.16
ACAA1-203ENST00000411549 KRTAP12-3P60328 96 aa7.73□□□□□ -1.17
ACAA1-203ENST00000411549 MACF1Q9UPN3 7388 aaKnown RBP7.72□□□□□ -1.17
ACAA1-203ENST00000411549 SYNE2Q8WXH0 6885 aaKnown RBP7.52□□□□□ -1.2
ACAA1-203ENST00000411549 KRTAP9-7A8MTY7 169 aa7.52□□□□□ -1.2
ACAA1-203ENST00000411549 KRTAP19-5Q3LI72 72 aa7.48□□□□□ -1.21
ACAA1-203ENST00000411549 KMT2DO14686 5537 aa7.48□□□□□ -1.21
ACAA1-203ENST00000411549 KRTAP6-3Q3LI67 103 aa7.45□□□□□ -1.22
ACAA1-203ENST00000411549 KRTAP4-8A0A0G2JLE6 195 aa7.44□□□□□ -1.22
ACAA1-203ENST00000411549 KRTAP4-8Q9BYQ9 185 aa7.44□□□□□ -1.22
ACAA1-203ENST00000411549 KRTAP5-9P26371 169 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms