RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 MIR22HGQ0VDD5 57 aa12.75□□□□□ -0.37
PMS1-205ENST00000409985 SEC61GP60059 68 aa12.72□□□□□ -0.37
PMS1-205ENST00000409985 DMBT1Q9UGM3 2413 aaPredicted RBP12.69□□□□□ -0.38
PMS1-205ENST00000409985 HERC1Q15751 4861 aa12.68□□□□□ -0.38
PMS1-205ENST00000409985 KRTAP3-1Q9BYR8 98 aa12.66□□□□□ -0.38
PMS1-205ENST00000409985 COX6B2Q6YFQ2 88 aa12.58□□□□□ -0.4
PMS1-205ENST00000409985 J3QL48 77 aa12.56□□□□□ -0.4
PMS1-205ENST00000409985 RPL37P61927 97 aaKnown RBP12.45□□□□□ -0.42
PMS1-205ENST00000409985 RBM12B-AS1Q9P1G2 102 aa12.45□□□□□ -0.42
PMS1-205ENST00000409985 A0A1B0GU33 70 aa12.38□□□□□ -0.43
PMS1-205ENST00000409985 HMCN2Q8NDA2 5059 aa12.37□□□□□ -0.43
PMS1-205ENST00000409985 H1FX-AS1Q4G0G2 97 aa12.35□□□□□ -0.43
PMS1-205ENST00000409985 H0YAA0 97 aa12.33□□□□□ -0.44
PMS1-205ENST00000409985 XP32Q5T750 250 aa12.33□□□□□ -0.44
PMS1-205ENST00000409985 LPAP08519 4548 aa12.29□□□□□ -0.44
PMS1-205ENST00000409985 LRP2P98164 4655 aa12.17□□□□□ -0.46
PMS1-205ENST00000409985 PRAC1Q96KF2 57 aa12.17□□□□□ -0.46
PMS1-205ENST00000409985 KRTAP3-3Q9BYR6 98 aa12.16□□□□□ -0.46
PMS1-205ENST00000409985 ADM2Q7Z4H4 148 aa12.15□□□□□ -0.46
PMS1-205ENST00000409985 S4R3F8 94 aa12.09□□□□□ -0.47
PMS1-205ENST00000409985 LCE2DQ5TA82 110 aaPredicted RBP12.08□□□□□ -0.48
PMS1-205ENST00000409985 KRTAP10-6P60371 365 aaPredicted RBP12.04□□□□□ -0.48
PMS1-205ENST00000409985 TPRXLQ17RH7 258 aa12.04□□□□□ -0.48
PMS1-205ENST00000409985 K7ERS5 55 aa12.03□□□□□ -0.48
PMS1-205ENST00000409985 KRTAP3-2Q9BYR7 98 aa11.97□□□□□ -0.49
PMS1-205ENST00000409985 CSAG1Q6PB30 78 aa11.93□□□□□ -0.5
PMS1-205ENST00000409985 UBR4Q5T4S7 5183 aa11.92□□□□□ -0.5
PMS1-205ENST00000409985 LINC01554Q52M75 96 aa11.91□□□□□ -0.5
PMS1-205ENST00000409985 KRTAP13-4Q3LI77 160 aa11.78□□□□□ -0.52
PMS1-205ENST00000409985 MUC17Q685J3 4493 aa11.75□□□□□ -0.53
PMS1-205ENST00000409985 KRTAP25-1Q3LHN0 102 aa11.74□□□□□ -0.53
PMS1-205ENST00000409985 P0C880 135 aa11.72□□□□□ -0.53
PMS1-205ENST00000409985 MUC2Q02817 5179 aa11.71□□□□□ -0.54
PMS1-205ENST00000409985 RNF213Q63HN8 5207 aa11.69□□□□□ -0.54
PMS1-205ENST00000409985 ROMO1P60602 79 aa11.68□□□□□ -0.54
PMS1-205ENST00000409985 A0A0D9SG42 100 aa11.6□□□□□ -0.55
PMS1-205ENST00000409985 M0QZ58 72 aa11.59□□□□□ -0.55
PMS1-205ENST00000409985 SEC61BP60468 96 aaKnown RBP11.58□□□□□ -0.56
PMS1-205ENST00000409985 KRTAP4-1Q9BYQ7 146 aa11.54□□□□□ -0.56
PMS1-205ENST00000409985 KRTAP12-1P59990 96 aa11.42□□□□□ -0.58
PMS1-205ENST00000409985 KRTAP12-2P59991 146 aa11.41□□□□□ -0.58
PMS1-205ENST00000409985 CRIPTQ9P021 101 aa11.3□□□□□ -0.6
PMS1-205ENST00000409985 SPINT4Q6UDR6 99 aa11.28□□□□□ -0.6
PMS1-205ENST00000409985 FAT4Q6V0I7 4981 aa11.27□□□□□ -0.61
PMS1-205ENST00000409985 R4GN34 69 aa11.19□□□□□ -0.62
PMS1-205ENST00000409985 KRTAP19-2Q3LHN2 52 aa11.18□□□□□ -0.62
PMS1-205ENST00000409985 LCE2CQ5TA81 110 aa11.08□□□□□ -0.64
PMS1-205ENST00000409985 C10orf95Q9H7T3 257 aa11.02□□□□□ -0.65
PMS1-205ENST00000409985 FLGP20930 4061 aaPredicted RBP10.98□□□□□ -0.65
PMS1-205ENST00000409985 LORP23490 312 aaPredicted RBP10.93□□□□□ -0.66
PMS1-205ENST00000409985 MT1HP80294 61 aa10.83□□□□□ -0.68
PMS1-205ENST00000409985 LCE2AQ5TA79 106 aaPredicted RBP10.81□□□□□ -0.68
PMS1-205ENST00000409985 KRTAP15-1Q3LI76 137 aa10.66□□□□□ -0.7
PMS1-205ENST00000409985 CAMK2N1Q7Z7J9 78 aa10.57□□□□□ -0.72
PMS1-205ENST00000409985 PP632Q6XCG6 107 aa10.55□□□□□ -0.72
PMS1-205ENST00000409985 M0R2T5 61 aa10.54□□□□□ -0.72
PMS1-205ENST00000409985 H3BS24 57 aa10.48□□□□□ -0.73
PMS1-205ENST00000409985 KRTAP9-8Q9BYQ0 159 aa10.38□□□□□ -0.75
PMS1-205ENST00000409985 KRTAP23-1A1A580 65 aa10.34□□□□□ -0.75
PMS1-205ENST00000409985 SPRR2GQ9BYE4 73 aa10.33□□□□□ -0.76
PMS1-205ENST00000409985 MT2AP02795 61 aa10.28□□□□□ -0.76
PMS1-205ENST00000409985 PLAC4Q8WY50 150 aa10.28□□□□□ -0.76
PMS1-205ENST00000409985 TNP1P09430 55 aa10.26□□□□□ -0.77
PMS1-205ENST00000409985 MT1FP04733 61 aa10.23□□□□□ -0.77
PMS1-205ENST00000409985 NDUFAF8A1L188 74 aa10.19□□□□□ -0.78
PMS1-205ENST00000409985 KRTAP19-1Q8IUB9 90 aa10.17□□□□□ -0.78
PMS1-205ENST00000409985 KRTAP10-10P60014 251 aa10.09□□□□□ -0.79
PMS1-205ENST00000409985 KRTAP9-3Q9BYQ3 159 aa10.02□□□□□ -0.8
PMS1-205ENST00000409985 KRTAP19-8Q3LI54 63 aa9.92□□□□□ -0.82
PMS1-205ENST00000409985 LCE2BO14633 110 aa9.86□□□□□ -0.83
PMS1-205ENST00000409985 USH2AO75445 5202 aa9.86□□□□□ -0.83
PMS1-205ENST00000409985 KRTAP9-2Q9BYQ4 174 aa9.85□□□□□ -0.83
PMS1-205ENST00000409985 FSIP2Q5CZC0 6907 aa9.83□□□□□ -0.84
PMS1-205ENST00000409985 LUZP6Q538Z0 58 aa9.8□□□□□ -0.84
PMS1-205ENST00000409985 SPRR5A0A1B0GTR4 108 aa9.73□□□□□ -0.85
PMS1-205ENST00000409985 MT1BP07438 61 aa9.67□□□□□ -0.86
PMS1-205ENST00000409985 SSPOA2VEC9 5147 aa9.66□□□□□ -0.86
PMS1-205ENST00000409985 LCE3AQ5TA76 89 aa9.62□□□□□ -0.87
PMS1-205ENST00000409985 KRTAP10-5P60370 271 aa9.57□□□□□ -0.88
PMS1-205ENST00000409985 MT1XP80297 61 aa9.56□□□□□ -0.88
PMS1-205ENST00000409985 KRTAP8-1Q8IUC2 63 aa9.55□□□□□ -0.88
PMS1-205ENST00000409985 CRCT1Q9UGL9 99 aa9.4□□□□□ -0.91
PMS1-205ENST00000409985 PRO2289Q9P1D8 64 aa9.37□□□□□ -0.91
PMS1-205ENST00000409985 KRTAP10-12P60413 245 aa9.36□□□□□ -0.91
PMS1-205ENST00000409985 KRTAP19-6Q3LI70 58 aa9.3□□□□□ -0.92
PMS1-205ENST00000409985 FCGBPQ9Y6R7 5405 aaPredicted RBP9.29□□□□□ -0.92
PMS1-205ENST00000409985 KRTAP9-6A0A140TA67 174 aa9.24□□□□□ -0.93
PMS1-205ENST00000409985 KRTAP12-3P60328 96 aa9.23□□□□□ -0.93
PMS1-205ENST00000409985 A0A0A0MQY5 61 aa9.22□□□□□ -0.93
PMS1-205ENST00000409985 LOC100996750A0A140TA64 210 aa9.22□□□□□ -0.93
PMS1-205ENST00000409985 KRTAP4-6Q9BYQ5 205 aa9.22□□□□□ -0.93
PMS1-205ENST00000409985 KRTAP10-7P60409 375 aaPredicted RBP9.19□□□□□ -0.94
PMS1-205ENST00000409985 MACF1Q9UPN3 7388 aaKnown RBP8.89□□□□□ -0.99
PMS1-205ENST00000409985 KRTAP19-5Q3LI72 72 aa8.83□□□□□ -1
PMS1-205ENST00000409985 KMT2DO14686 5537 aa8.82□□□□□ -1
PMS1-205ENST00000409985 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.74□□□□□ -1.01
PMS1-205ENST00000409985 LCE3CQ5T5A8 94 aa8.71□□□□□ -1.01
PMS1-205ENST00000409985 SYNE2Q8WXH0 6885 aaKnown RBP8.7□□□□□ -1.02
PMS1-205ENST00000409985 KRTAP19-4Q3LI73 84 aa8.68□□□□□ -1.02
PMS1-205ENST00000409985 KRTAP4-8A0A0G2JLE6 195 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms