RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 PRAC1Q96KF2 57 aa10.67□□□□□ -0.7
LIMS2-207ENST00000409808 BIRC6Q9NR09 4857 aa10.63□□□□□ -0.71
LIMS2-207ENST00000409808 ABCA13Q86UQ4 5058 aa10.61□□□□□ -0.71
LIMS2-207ENST00000409808 ADM2Q7Z4H4 148 aa10.61□□□□□ -0.71
LIMS2-207ENST00000409808 HERC2O95714 4834 aa10.56□□□□□ -0.72
LIMS2-207ENST00000409808 KRTAP3-1Q9BYR8 98 aa10.51□□□□□ -0.73
LIMS2-207ENST00000409808 LINC01554Q52M75 96 aa10.43□□□□□ -0.74
LIMS2-207ENST00000409808 A0A1B0GU33 70 aa10.42□□□□□ -0.74
LIMS2-207ENST00000409808 COX6B2Q6YFQ2 88 aa10.42□□□□□ -0.74
LIMS2-207ENST00000409808 H0YAA0 97 aa10.4□□□□□ -0.74
LIMS2-207ENST00000409808 H1FX-AS1Q4G0G2 97 aa10.38□□□□□ -0.75
LIMS2-207ENST00000409808 J3QL48 77 aa10.38□□□□□ -0.75
LIMS2-207ENST00000409808 XP32Q5T750 250 aa10.36□□□□□ -0.75
LIMS2-207ENST00000409808 LPAP08519 4548 aa10.34□□□□□ -0.75
LIMS2-207ENST00000409808 H3BS24 57 aa10.31□□□□□ -0.76
LIMS2-207ENST00000409808 RPL37P61927 97 aaKnown RBP10.28□□□□□ -0.76
LIMS2-207ENST00000409808 CSAG1Q6PB30 78 aa10.27□□□□□ -0.77
LIMS2-207ENST00000409808 LRP2P98164 4655 aa10.25□□□□□ -0.77
LIMS2-207ENST00000409808 TPRXLQ17RH7 258 aa10.24□□□□□ -0.77
LIMS2-207ENST00000409808 PCLOQ9Y6V0 5065 aa10.21□□□□□ -0.78
LIMS2-207ENST00000409808 K7ERS5 55 aa10.18□□□□□ -0.78
LIMS2-207ENST00000409808 KRTAP3-3Q9BYR6 98 aa10.08□□□□□ -0.8
LIMS2-207ENST00000409808 HERC1Q15751 4861 aa10.06□□□□□ -0.8
LIMS2-207ENST00000409808 KRTAP25-1Q3LHN0 102 aa10.06□□□□□ -0.8
LIMS2-207ENST00000409808 KRTAP10-6P60371 365 aaPredicted RBP10.03□□□□□ -0.8
LIMS2-207ENST00000409808 S4R3F8 94 aa10.02□□□□□ -0.8
LIMS2-207ENST00000409808 KRTAP3-2Q9BYR7 98 aa9.96□□□□□ -0.82
LIMS2-207ENST00000409808 ROMO1P60602 79 aa9.9□□□□□ -0.82
LIMS2-207ENST00000409808 SEC61BP60468 96 aaKnown RBP9.87□□□□□ -0.83
LIMS2-207ENST00000409808 KRTAP13-4Q3LI77 160 aa9.87□□□□□ -0.83
LIMS2-207ENST00000409808 HMCN2Q8NDA2 5059 aa9.86□□□□□ -0.83
LIMS2-207ENST00000409808 MUC17Q685J3 4493 aa9.83□□□□□ -0.84
LIMS2-207ENST00000409808 KRTAP4-1Q9BYQ7 146 aa9.83□□□□□ -0.84
LIMS2-207ENST00000409808 A0A0D9SG42 100 aa9.79□□□□□ -0.84
LIMS2-207ENST00000409808 P0C880 135 aa9.77□□□□□ -0.85
LIMS2-207ENST00000409808 CRIPTQ9P021 101 aa9.7□□□□□ -0.86
LIMS2-207ENST00000409808 MUC2Q02817 5179 aa9.7□□□□□ -0.86
LIMS2-207ENST00000409808 M0QZ58 72 aa9.63□□□□□ -0.87
LIMS2-207ENST00000409808 KRTAP12-2P59991 146 aa9.58□□□□□ -0.88
LIMS2-207ENST00000409808 KRTAP12-1P59990 96 aa9.56□□□□□ -0.88
LIMS2-207ENST00000409808 KRTAP19-2Q3LHN2 52 aa9.52□□□□□ -0.89
LIMS2-207ENST00000409808 SPINT4Q6UDR6 99 aa9.5□□□□□ -0.89
LIMS2-207ENST00000409808 UBR4Q5T4S7 5183 aa9.47□□□□□ -0.89
LIMS2-207ENST00000409808 C10orf95Q9H7T3 257 aa9.39□□□□□ -0.91
LIMS2-207ENST00000409808 RNF213Q63HN8 5207 aa9.39□□□□□ -0.91
LIMS2-207ENST00000409808 FLGP20930 4061 aaPredicted RBP9.32□□□□□ -0.92
LIMS2-207ENST00000409808 R4GN34 69 aa9.29□□□□□ -0.92
LIMS2-207ENST00000409808 FAT4Q6V0I7 4981 aa9.27□□□□□ -0.93
LIMS2-207ENST00000409808 LCE2CQ5TA81 110 aa9.26□□□□□ -0.93
LIMS2-207ENST00000409808 KRTAP15-1Q3LI76 137 aa9.16□□□□□ -0.94
LIMS2-207ENST00000409808 NDUFAF8A1L188 74 aa9.15□□□□□ -0.94
LIMS2-207ENST00000409808 MT1HP80294 61 aa9.05□□□□□ -0.96
LIMS2-207ENST00000409808 LORP23490 312 aaPredicted RBP9.05□□□□□ -0.96
LIMS2-207ENST00000409808 M0R2T5 61 aa8.99□□□□□ -0.97
LIMS2-207ENST00000409808 PP632Q6XCG6 107 aa8.85□□□□□ -0.99
LIMS2-207ENST00000409808 CAMK2N1Q7Z7J9 78 aa8.82□□□□□ -1
LIMS2-207ENST00000409808 PLAC4Q8WY50 150 aa8.77□□□□□ -1
LIMS2-207ENST00000409808 KRTAP9-8Q9BYQ0 159 aa8.74□□□□□ -1.01
LIMS2-207ENST00000409808 MT2AP02795 61 aa8.72□□□□□ -1.01
LIMS2-207ENST00000409808 MT1FP04733 61 aa8.7□□□□□ -1.02
LIMS2-207ENST00000409808 KRTAP10-10P60014 251 aa8.67□□□□□ -1.02
LIMS2-207ENST00000409808 KRTAP23-1A1A580 65 aa8.59□□□□□ -1.03
LIMS2-207ENST00000409808 A0A0A0MQY5 61 aa8.58□□□□□ -1.04
LIMS2-207ENST00000409808 LCE2AQ5TA79 106 aaPredicted RBP8.58□□□□□ -1.04
LIMS2-207ENST00000409808 KRTAP19-1Q8IUB9 90 aa8.58□□□□□ -1.04
LIMS2-207ENST00000409808 TNP1P09430 55 aa8.55□□□□□ -1.04
LIMS2-207ENST00000409808 SPRR2GQ9BYE4 73 aa8.54□□□□□ -1.04
LIMS2-207ENST00000409808 LUZP6Q538Z0 58 aa8.42□□□□□ -1.06
LIMS2-207ENST00000409808 KRTAP9-3Q9BYQ3 159 aa8.41□□□□□ -1.06
LIMS2-207ENST00000409808 KRTAP19-8Q3LI54 63 aa8.29□□□□□ -1.08
LIMS2-207ENST00000409808 MT1BP07438 61 aa8.25□□□□□ -1.09
LIMS2-207ENST00000409808 SPRR5A0A1B0GTR4 108 aa8.2□□□□□ -1.1
LIMS2-207ENST00000409808 LCE2BO14633 110 aa8.2□□□□□ -1.1
LIMS2-207ENST00000409808 USH2AO75445 5202 aa8.06□□□□□ -1.12
LIMS2-207ENST00000409808 MT1XP80297 61 aa8.01□□□□□ -1.13
LIMS2-207ENST00000409808 KRTAP10-5P60370 271 aa8□□□□□ -1.13
LIMS2-207ENST00000409808 LCE3AQ5TA76 89 aa8□□□□□ -1.13
LIMS2-207ENST00000409808 KRTAP8-1Q8IUC2 63 aa7.9□□□□□ -1.14
LIMS2-207ENST00000409808 PRO2289Q9P1D8 64 aa7.79□□□□□ -1.16
LIMS2-207ENST00000409808 FSIP2Q5CZC0 6907 aa7.75□□□□□ -1.17
LIMS2-207ENST00000409808 KRTAP10-7P60409 375 aaPredicted RBP7.74□□□□□ -1.17
LIMS2-207ENST00000409808 SSPOA2VEC9 5147 aa7.73□□□□□ -1.17
LIMS2-207ENST00000409808 KRTAP10-12P60413 245 aa7.71□□□□□ -1.18
LIMS2-207ENST00000409808 LCE2DQ5TA82 110 aaPredicted RBP7.68□□□□□ -1.18
LIMS2-207ENST00000409808 KRTAP12-3P60328 96 aa7.67□□□□□ -1.18
LIMS2-207ENST00000409808 KRTAP19-6Q3LI70 58 aa7.57□□□□□ -1.2
LIMS2-207ENST00000409808 KMT2DO14686 5537 aa7.54□□□□□ -1.2
LIMS2-207ENST00000409808 KRTAP4-8A0A0G2JLE6 195 aa7.45□□□□□ -1.22
LIMS2-207ENST00000409808 KRTAP4-8Q9BYQ9 185 aa7.45□□□□□ -1.22
LIMS2-207ENST00000409808 KRTAP9-2Q9BYQ4 174 aa7.42□□□□□ -1.22
LIMS2-207ENST00000409808 FCGBPQ9Y6R7 5405 aaPredicted RBP7.38□□□□□ -1.23
LIMS2-207ENST00000409808 INE1O15225 51 aa7.34□□□□□ -1.23
LIMS2-207ENST00000409808 KRTAP19-5Q3LI72 72 aa7.28□□□□□ -1.24
LIMS2-207ENST00000409808 LCE3CQ5T5A8 94 aa7.24□□□□□ -1.25
LIMS2-207ENST00000409808 CRCT1Q9UGL9 99 aa7.16□□□□□ -1.26
LIMS2-207ENST00000409808 KRTAP19-7Q3SYF9 63 aa7.14□□□□□ -1.27
LIMS2-207ENST00000409808 KRTAP19-4Q3LI73 84 aa7.08□□□□□ -1.28
LIMS2-207ENST00000409808 MACF1Q9UPN3 7388 aaKnown RBP7.02□□□□□ -1.29
LIMS2-207ENST00000409808 MT1EP04732 61 aa6.99□□□□□ -1.29
LIMS2-207ENST00000409808 MUC12Q9UKN1 5478 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms