RNA–Protein interactions for RNA: ENST00000409460.5

VWA3B-201, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 4,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-201ENST00000409460 M0R2T5 61 aa4.94□□□□□ -1.62
VWA3B-201ENST00000409460 UQCR11O14957 56 aa4.93□□□□□ -1.62
VWA3B-201ENST00000409460 IGLV8-61A0A075B6I0 122 aa4.93□□□□□ -1.62
VWA3B-201ENST00000409460 LRP1Q07954 4544 aaKnown RBP4.92□□□□□ -1.62
VWA3B-201ENST00000409460 KRTAP13-3Q3SY46 172 aa4.92□□□□□ -1.62
VWA3B-201ENST00000409460 MRPL34Q9BQ48 92 aaKnown RBP4.92□□□□□ -1.62
VWA3B-201ENST00000409460 KRTAP25-1Q3LHN0 102 aa4.91□□□□□ -1.62
VWA3B-201ENST00000409460 MMP24-AS1A0A0U1RRL7 71 aa4.9□□□□□ -1.63
VWA3B-201ENST00000409460 CRIPTQ9P021 101 aa4.9□□□□□ -1.63
VWA3B-201ENST00000409460 C9orf92A6NGG3 77 aa4.9□□□□□ -1.63
VWA3B-201ENST00000409460 SPRR1BP22528 89 aa4.9□□□□□ -1.63
VWA3B-201ENST00000409460 C8orf17Q9NRJ1 99 aa4.9□□□□□ -1.63
VWA3B-201ENST00000409460 KRTAP4-16G5E9R7 235 aaPredicted RBP4.88□□□□□ -1.63
VWA3B-201ENST00000409460 A0A1B0GVX0 72 aa4.86□□□□□ -1.63
VWA3B-201ENST00000409460 A8MUU9 505 aa4.86□□□□□ -1.63
VWA3B-201ENST00000409460 XP32Q5T750 250 aa4.86□□□□□ -1.63
VWA3B-201ENST00000409460 LINC00472Q9H8W2 130 aa4.85□□□□□ -1.63
VWA3B-201ENST00000409460 NDUFAF8A1L188 74 aa4.85□□□□□ -1.63
VWA3B-201ENST00000409460 KRTAP16-1A8MUX0 517 aa4.83□□□□□ -1.64
VWA3B-201ENST00000409460 KRTAP9-2Q9BYQ4 174 aa4.82□□□□□ -1.64
VWA3B-201ENST00000409460 RNF213Q63HN8 5207 aa4.8□□□□□ -1.64
VWA3B-201ENST00000409460 Q96NJ1 140 aa4.79□□□□□ -1.64
VWA3B-201ENST00000409460 SPINT4Q6UDR6 99 aa4.78□□□□□ -1.64
VWA3B-201ENST00000409460 RPL37P61927 97 aaKnown RBP4.78□□□□□ -1.64
VWA3B-201ENST00000409460 DMAC1Q96GE9 116 aa4.78□□□□□ -1.64
VWA3B-201ENST00000409460 LRP2P98164 4655 aa4.77□□□□□ -1.65
VWA3B-201ENST00000409460 UBR4Q5T4S7 5183 aa4.77□□□□□ -1.65
VWA3B-201ENST00000409460 KRTAP9-6A0A140TA67 174 aa4.76□□□□□ -1.65
VWA3B-201ENST00000409460 C20orf166-AS1Q96NR2 134 aa4.76□□□□□ -1.65
VWA3B-201ENST00000409460 Q5W150 140 aa4.75□□□□□ -1.65
VWA3B-201ENST00000409460 TNXBP22105 4242 aa4.75□□□□□ -1.65
VWA3B-201ENST00000409460 NOTCH2NLQ7Z3S9 236 aa4.74□□□□□ -1.65
VWA3B-201ENST00000409460 LCE2AQ5TA79 106 aaPredicted RBP4.7□□□□□ -1.66
VWA3B-201ENST00000409460 LUZP6Q538Z0 58 aa4.66□□□□□ -1.66
VWA3B-201ENST00000409460 LCE2DQ5TA82 110 aaPredicted RBP4.66□□□□□ -1.66
VWA3B-201ENST00000409460 H0YAA0 97 aa4.65□□□□□ -1.66
VWA3B-201ENST00000409460 CRCT1Q9UGL9 99 aa4.62□□□□□ -1.67
VWA3B-201ENST00000409460 KRTAP15-1Q3LI76 137 aa4.59□□□□□ -1.68
VWA3B-201ENST00000409460 KRTAP4-1Q9BYQ7 146 aa4.57□□□□□ -1.68
VWA3B-201ENST00000409460 MT1HP80294 61 aa4.56□□□□□ -1.68
VWA3B-201ENST00000409460 A0A1B0GU33 70 aa4.56□□□□□ -1.68
VWA3B-201ENST00000409460 C10orf95Q9H7T3 257 aa4.55□□□□□ -1.68
VWA3B-201ENST00000409460 KRTAP10-6P60371 365 aaPredicted RBP4.53□□□□□ -1.68
VWA3B-201ENST00000409460 MUC17Q685J3 4493 aa4.53□□□□□ -1.68
VWA3B-201ENST00000409460 A0A0D9SG42 100 aa4.53□□□□□ -1.68
VWA3B-201ENST00000409460 LPAP08519 4548 aa4.51□□□□□ -1.69
VWA3B-201ENST00000409460 FAT4Q6V0I7 4981 aa4.49□□□□□ -1.69
VWA3B-201ENST00000409460 H1FX-AS1Q4G0G2 97 aa4.46□□□□□ -1.69
VWA3B-201ENST00000409460 KRTAP10-10P60014 251 aa4.46□□□□□ -1.7
VWA3B-201ENST00000409460 LORP23490 312 aaPredicted RBP4.44□□□□□ -1.7
VWA3B-201ENST00000409460 LCE2CQ5TA81 110 aa4.44□□□□□ -1.7
VWA3B-201ENST00000409460 KRTAP19-2Q3LHN2 52 aa4.36□□□□□ -1.71
VWA3B-201ENST00000409460 CAMK2N1Q7Z7J9 78 aa4.36□□□□□ -1.71
VWA3B-201ENST00000409460 S4R3F8 94 aa4.31□□□□□ -1.72
VWA3B-201ENST00000409460 KRTAP9-7A8MTY7 169 aa4.28□□□□□ -1.72
VWA3B-201ENST00000409460 R4GN34 69 aa4.28□□□□□ -1.72
VWA3B-201ENST00000409460 MT2AP02795 61 aa4.25□□□□□ -1.73
VWA3B-201ENST00000409460 KRTAP13-4Q3LI77 160 aa4.23□□□□□ -1.73
VWA3B-201ENST00000409460 MUC2Q02817 5179 aa4.23□□□□□ -1.73
VWA3B-201ENST00000409460 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.22□□□□□ -1.73
VWA3B-201ENST00000409460 KRTAP3-1Q9BYR8 98 aa4.21□□□□□ -1.74
VWA3B-201ENST00000409460 KRTAP9-8Q9BYQ0 159 aa4.2□□□□□ -1.74
VWA3B-201ENST00000409460 M0QZ58 72 aa4.19□□□□□ -1.74
VWA3B-201ENST00000409460 MT1FP04733 61 aa4.17□□□□□ -1.74
VWA3B-201ENST00000409460 KRTAP19-1Q8IUB9 90 aa4.17□□□□□ -1.74
VWA3B-201ENST00000409460 PLAC4Q8WY50 150 aa4.16□□□□□ -1.74
VWA3B-201ENST00000409460 KRTAP12-2P59991 146 aa4.15□□□□□ -1.75
VWA3B-201ENST00000409460 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
VWA3B-201ENST00000409460 FLGP20930 4061 aaPredicted RBP4.12□□□□□ -1.75
VWA3B-201ENST00000409460 KRTAP9-3Q9BYQ3 159 aa4.11□□□□□ -1.75
VWA3B-201ENST00000409460 KRTAP3-2Q9BYR7 98 aa4.11□□□□□ -1.75
VWA3B-201ENST00000409460 KRTAP19-6Q3LI70 58 aa4.07□□□□□ -1.76
VWA3B-201ENST00000409460 LCE2BO14633 110 aa4.05□□□□□ -1.76
VWA3B-201ENST00000409460 KRTAP12-1P59990 96 aa4.04□□□□□ -1.76
VWA3B-201ENST00000409460 PRO2289Q9P1D8 64 aa4.02□□□□□ -1.77
VWA3B-201ENST00000409460 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
VWA3B-201ENST00000409460 PP632Q6XCG6 107 aa3.98□□□□□ -1.77
VWA3B-201ENST00000409460 KRTAP3-3Q9BYR6 98 aa3.96□□□□□ -1.78
VWA3B-201ENST00000409460 USH2AO75445 5202 aa3.9□□□□□ -1.78
VWA3B-201ENST00000409460 SPRR2GQ9BYE4 73 aa3.87□□□□□ -1.79
VWA3B-201ENST00000409460 TNP1P09430 55 aa3.86□□□□□ -1.79
VWA3B-201ENST00000409460 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
VWA3B-201ENST00000409460 SSPOA2VEC9 5147 aa3.85□□□□□ -1.79
VWA3B-201ENST00000409460 KRTAP19-8Q3LI54 63 aa3.85□□□□□ -1.79
VWA3B-201ENST00000409460 KRTAP10-5P60370 271 aa3.84□□□□□ -1.8
VWA3B-201ENST00000409460 FCGBPQ9Y6R7 5405 aaPredicted RBP3.84□□□□□ -1.8
VWA3B-201ENST00000409460 MT1BP07438 61 aa3.78□□□□□ -1.8
VWA3B-201ENST00000409460 KRTAP8-1Q8IUC2 63 aa3.75□□□□□ -1.81
VWA3B-201ENST00000409460 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
VWA3B-201ENST00000409460 SPRR2EP22531 72 aa3.72□□□□□ -1.81
VWA3B-201ENST00000409460 SPRR2BP35325 72 aa3.72□□□□□ -1.81
VWA3B-201ENST00000409460 SPRR2AP35326 72 aa3.72□□□□□ -1.81
VWA3B-201ENST00000409460 KRTAP2-3P0C7H8 128 aa3.72□□□□□ -1.81
VWA3B-201ENST00000409460 KRTAP2-4Q9BYR9 128 aa3.72□□□□□ -1.81
VWA3B-201ENST00000409460 MACF1Q9UPN3 7388 aaKnown RBP3.71□□□□□ -1.82
VWA3B-201ENST00000409460 SYNE2Q8WXH0 6885 aaKnown RBP3.7□□□□□ -1.82
VWA3B-201ENST00000409460 NEBP20929 6669 aa3.7□□□□□ -1.82
VWA3B-201ENST00000409460 INE1O15225 51 aa3.68□□□□□ -1.82
VWA3B-201ENST00000409460 SPRR5A0A1B0GTR4 108 aa3.64□□□□□ -1.83
VWA3B-201ENST00000409460 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms