RNA–Protein interactions for RNA: ENST00000409387.5

SLC3A1-205, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 2,334 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-205ENST00000409387 XP32Q5T750 250 aa6.04□□□□□ -1.44
SLC3A1-205ENST00000409387 KRTAP10-1P60331 282 aa6.02□□□□□ -1.45
SLC3A1-205ENST00000409387 KRTAP10-8P60410 259 aa6.02□□□□□ -1.45
SLC3A1-205ENST00000409387 SPINK6Q6UWN8 80 aa5.94□□□□□ -1.46
SLC3A1-205ENST00000409387 KRTAP3-2Q9BYR7 98 aa5.94□□□□□ -1.46
SLC3A1-205ENST00000409387 DYNC1H1Q14204 4646 aaKnown RBP5.94□□□□□ -1.46
SLC3A1-205ENST00000409387 KMT2CQ8NEZ4 4911 aaKnown RBP5.93□□□□□ -1.46
SLC3A1-205ENST00000409387 RYR2Q92736 4967 aa5.9□□□□□ -1.46
SLC3A1-205ENST00000409387 FAT1Q14517 4588 aa5.89□□□□□ -1.47
SLC3A1-205ENST00000409387 KRTAP13-2Q52LG2 175 aa5.88□□□□□ -1.47
SLC3A1-205ENST00000409387 APOBP04114 4563 aaKnown RBP5.88□□□□□ -1.47
SLC3A1-205ENST00000409387 S4R3F8 94 aa5.88□□□□□ -1.47
SLC3A1-205ENST00000409387 KRTAP1-4P0C5Y4 121 aa5.86□□□□□ -1.47
SLC3A1-205ENST00000409387 A0A0D9SG42 100 aa5.83□□□□□ -1.48
SLC3A1-205ENST00000409387 KRTAP12-2P59991 146 aa5.83□□□□□ -1.48
SLC3A1-205ENST00000409387 SMR3BP02814 79 aaPredicted RBP5.82□□□□□ -1.48
SLC3A1-205ENST00000409387 A0A1B0GVY2 172 aa5.78□□□□□ -1.48
SLC3A1-205ENST00000409387 PKHD1L1Q86WI1 4243 aa5.76□□□□□ -1.49
SLC3A1-205ENST00000409387 RYR3Q15413 4870 aa5.75□□□□□ -1.49
SLC3A1-205ENST00000409387 KRTAP13-4Q3LI77 160 aa5.74□□□□□ -1.49
SLC3A1-205ENST00000409387 KRTAP10-4P60372 401 aaPredicted RBP5.71□□□□□ -1.5
SLC3A1-205ENST00000409387 LRP1Q07954 4544 aaKnown RBP5.68□□□□□ -1.5
SLC3A1-205ENST00000409387 LOC100996750A0A140TA64 210 aa5.68□□□□□ -1.5
SLC3A1-205ENST00000409387 KRTAP4-6Q9BYQ5 205 aa5.68□□□□□ -1.5
SLC3A1-205ENST00000409387 HSPG2P98160 4391 aa5.68□□□□□ -1.5
SLC3A1-205ENST00000409387 KRTAP10-6P60371 365 aaPredicted RBP5.66□□□□□ -1.5
SLC3A1-205ENST00000409387 DMBT1Q9UGM3 2413 aaPredicted RBP5.66□□□□□ -1.5
SLC3A1-205ENST00000409387 RPS29P62273 56 aaKnown RBP5.66□□□□□ -1.5
SLC3A1-205ENST00000409387 KRTAP3-1Q9BYR8 98 aa5.64□□□□□ -1.51
SLC3A1-205ENST00000409387 PP632Q6XCG6 107 aa5.62□□□□□ -1.51
SLC3A1-205ENST00000409387 TNXBP22105 4242 aa5.62□□□□□ -1.51
SLC3A1-205ENST00000409387 KRTAP12-1P59990 96 aa5.6□□□□□ -1.51
SLC3A1-205ENST00000409387 RYR1P21817 5038 aa5.59□□□□□ -1.51
SLC3A1-205ENST00000409387 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
SLC3A1-205ENST00000409387 KIAA1109Q2LD37 5005 aa5.59□□□□□ -1.51
SLC3A1-205ENST00000409387 C9orf92A6NGG3 77 aa5.58□□□□□ -1.52
SLC3A1-205ENST00000409387 FAT3Q8TDW7 4589 aa5.57□□□□□ -1.52
SLC3A1-205ENST00000409387 MYCBP2O75592 4640 aa5.56□□□□□ -1.52
SLC3A1-205ENST00000409387 Q5VSD8 79 aa5.55□□□□□ -1.52
SLC3A1-205ENST00000409387 EPPK1P58107 5090 aaKnown RBP5.55□□□□□ -1.52
SLC3A1-205ENST00000409387 KRTAP17-1Q9BYP8 105 aa5.54□□□□□ -1.52
SLC3A1-205ENST00000409387 LCE2DQ5TA82 110 aaPredicted RBP5.48□□□□□ -1.53
SLC3A1-205ENST00000409387 KRTAP3-3Q9BYR6 98 aa5.43□□□□□ -1.54
SLC3A1-205ENST00000409387 MT1HL1P0DM35 61 aa5.35□□□□□ -1.55
SLC3A1-205ENST00000409387 ABCA13Q86UQ4 5058 aa5.35□□□□□ -1.55
SLC3A1-205ENST00000409387 LPAP08519 4548 aa5.33□□□□□ -1.56
SLC3A1-205ENST00000409387 LRP2P98164 4655 aa5.31□□□□□ -1.56
SLC3A1-205ENST00000409387 M0QZ58 72 aa5.3□□□□□ -1.56
SLC3A1-205ENST00000409387 KRTAP4-5Q9BYR2 181 aa5.28□□□□□ -1.56
SLC3A1-205ENST00000409387 LCE2AQ5TA79 106 aaPredicted RBP5.19□□□□□ -1.58
SLC3A1-205ENST00000409387 HERC2O95714 4834 aa5.19□□□□□ -1.58
SLC3A1-205ENST00000409387 LCE2CQ5TA81 110 aa5.11□□□□□ -1.59
SLC3A1-205ENST00000409387 LORP23490 312 aaPredicted RBP5.09□□□□□ -1.59
SLC3A1-205ENST00000409387 BIRC6Q9NR09 4857 aa5.09□□□□□ -1.59
SLC3A1-205ENST00000409387 MUC17Q685J3 4493 aa5.07□□□□□ -1.6
SLC3A1-205ENST00000409387 PCLOQ9Y6V0 5065 aa5.02□□□□□ -1.61
SLC3A1-205ENST00000409387 HERC1Q15751 4861 aa5□□□□□ -1.61
SLC3A1-205ENST00000409387 MUC2Q02817 5179 aa4.99□□□□□ -1.61
SLC3A1-205ENST00000409387 KRTAP4-1Q9BYQ7 146 aa4.96□□□□□ -1.62
SLC3A1-205ENST00000409387 HMCN2Q8NDA2 5059 aa4.9□□□□□ -1.63
SLC3A1-205ENST00000409387 KRTAP10-10P60014 251 aa4.86□□□□□ -1.63
SLC3A1-205ENST00000409387 KRTAP19-2Q3LHN2 52 aa4.84□□□□□ -1.63
SLC3A1-205ENST00000409387 KRTAP4-8Q9BYQ9 185 aa4.8□□□□□ -1.64
SLC3A1-205ENST00000409387 FLGP20930 4061 aaPredicted RBP4.78□□□□□ -1.64
SLC3A1-205ENST00000409387 FAT4Q6V0I7 4981 aa4.78□□□□□ -1.64
SLC3A1-205ENST00000409387 KRTAP2-2Q9BYT5 123 aa4.75□□□□□ -1.65
SLC3A1-205ENST00000409387 TNP1P09430 55 aa4.75□□□□□ -1.65
SLC3A1-205ENST00000409387 UBR4Q5T4S7 5183 aa4.74□□□□□ -1.65
SLC3A1-205ENST00000409387 RNF213Q63HN8 5207 aa4.72□□□□□ -1.65
SLC3A1-205ENST00000409387 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.71□□□□□ -1.66
SLC3A1-205ENST00000409387 LCE2BO14633 110 aa4.69□□□□□ -1.66
SLC3A1-205ENST00000409387 KRTAP9-8Q9BYQ0 159 aa4.68□□□□□ -1.66
SLC3A1-205ENST00000409387 KRTAP9-2Q9BYQ4 174 aa4.67□□□□□ -1.66
SLC3A1-205ENST00000409387 KRTAP9-6A0A140TA67 174 aa4.67□□□□□ -1.66
SLC3A1-205ENST00000409387 KRTAP5-3Q6L8H2 238 aa4.63□□□□□ -1.67
SLC3A1-205ENST00000409387 KRTAP4-8A0A0G2JLE6 195 aa4.62□□□□□ -1.67
SLC3A1-205ENST00000409387 M0R2T5 61 aa4.56□□□□□ -1.68
SLC3A1-205ENST00000409387 KRTAP4-7Q9BYR0 210 aa4.54□□□□□ -1.68
SLC3A1-205ENST00000409387 MT1HP80294 61 aa4.48□□□□□ -1.69
SLC3A1-205ENST00000409387 LCE3BQ5TA77 95 aa4.47□□□□□ -1.69
SLC3A1-205ENST00000409387 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
SLC3A1-205ENST00000409387 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
SLC3A1-205ENST00000409387 KRTAP19-1Q8IUB9 90 aa4.39□□□□□ -1.71
SLC3A1-205ENST00000409387 MT1FP04733 61 aa4.38□□□□□ -1.71
SLC3A1-205ENST00000409387 SPRR2GQ9BYE4 73 aa4.38□□□□□ -1.71
SLC3A1-205ENST00000409387 MT2AP02795 61 aa4.37□□□□□ -1.71
SLC3A1-205ENST00000409387 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
SLC3A1-205ENST00000409387 KRTAP10-12P60413 245 aa4.33□□□□□ -1.72
SLC3A1-205ENST00000409387 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
SLC3A1-205ENST00000409387 KRTAP6-3Q3LI67 103 aa4.33□□□□□ -1.72
SLC3A1-205ENST00000409387 LCE5AQ5TCM9 118 aa4.33□□□□□ -1.72
SLC3A1-205ENST00000409387 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
SLC3A1-205ENST00000409387 KRTAP8-1Q8IUC2 63 aa4.22□□□□□ -1.73
SLC3A1-205ENST00000409387 KRTAP4-9Q9BYQ8 210 aa4.22□□□□□ -1.73
SLC3A1-205ENST00000409387 KRTAP2-3P0C7H8 128 aa4.2□□□□□ -1.74
SLC3A1-205ENST00000409387 KRTAP19-8Q3LI54 63 aa4.2□□□□□ -1.74
SLC3A1-205ENST00000409387 LCE1DQ5T752 114 aa4.2□□□□□ -1.74
SLC3A1-205ENST00000409387 KRTAP2-4Q9BYR9 128 aa4.2□□□□□ -1.74
SLC3A1-205ENST00000409387 KRTAP2-1Q9BYU5 128 aa4.2□□□□□ -1.74
SLC3A1-205ENST00000409387 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms