RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 KRTAP4-1Q9BYQ7 146 aa5.14□□□□□ -1.59
SNORD88C-201ENST00000408061 HERC1Q15751 4861 aa5.13□□□□□ -1.59
SNORD88C-201ENST00000408061 HMCN2Q8NDA2 5059 aa5.12□□□□□ -1.59
SNORD88C-201ENST00000408061 A0A1B0GU69 56 aa5.12□□□□□ -1.59
SNORD88C-201ENST00000408061 LCA10Q71F78 164 aa5.12□□□□□ -1.59
SNORD88C-201ENST00000408061 CSAG1Q6PB30 78 aa5.11□□□□□ -1.59
SNORD88C-201ENST00000408061 KRTAP3-3Q9BYR6 98 aa5.1□□□□□ -1.59
SNORD88C-201ENST00000408061 PSPHP1O15172 72 aa5.08□□□□□ -1.6
SNORD88C-201ENST00000408061 KRTAP19-2Q3LHN2 52 aa5.07□□□□□ -1.6
SNORD88C-201ENST00000408061 Q5VV11 94 aa5.07□□□□□ -1.6
SNORD88C-201ENST00000408061 H0YAA0 97 aa5.04□□□□□ -1.6
SNORD88C-201ENST00000408061 UQCR11O14957 56 aa5□□□□□ -1.61
SNORD88C-201ENST00000408061 A6NED7 52 aa4.98□□□□□ -1.61
SNORD88C-201ENST00000408061 A0A1B0GU33 70 aa4.96□□□□□ -1.62
SNORD88C-201ENST00000408061 LCE2CQ5TA81 110 aa4.94□□□□□ -1.62
SNORD88C-201ENST00000408061 CDC42SE1Q9NRR8 79 aa4.94□□□□□ -1.62
SNORD88C-201ENST00000408061 KRTAP10-6P60371 365 aaPredicted RBP4.93□□□□□ -1.62
SNORD88C-201ENST00000408061 SPATA8Q6RVD6 105 aa4.93□□□□□ -1.62
SNORD88C-201ENST00000408061 KRTAP3-2Q9BYR7 98 aa4.93□□□□□ -1.62
SNORD88C-201ENST00000408061 ADM2Q7Z4H4 148 aa4.92□□□□□ -1.62
SNORD88C-201ENST00000408061 MIR22HGQ0VDD5 57 aa4.91□□□□□ -1.62
SNORD88C-201ENST00000408061 BRK1Q8WUW1 75 aa4.91□□□□□ -1.62
SNORD88C-201ENST00000408061 M0QZ58 72 aa4.89□□□□□ -1.63
SNORD88C-201ENST00000408061 FLGP20930 4061 aaPredicted RBP4.88□□□□□ -1.63
SNORD88C-201ENST00000408061 PRO0628Q9UI54 55 aa4.88□□□□□ -1.63
SNORD88C-201ENST00000408061 P0C880 135 aa4.86□□□□□ -1.63
SNORD88C-201ENST00000408061 CRIPTQ9P021 101 aa4.85□□□□□ -1.63
SNORD88C-201ENST00000408061 MT1HP80294 61 aa4.84□□□□□ -1.63
SNORD88C-201ENST00000408061 M0R2T5 61 aa4.83□□□□□ -1.64
SNORD88C-201ENST00000408061 MUC2Q02817 5179 aa4.83□□□□□ -1.64
SNORD88C-201ENST00000408061 RNF213Q63HN8 5207 aa4.81□□□□□ -1.64
SNORD88C-201ENST00000408061 UBR4Q5T4S7 5183 aa4.79□□□□□ -1.64
SNORD88C-201ENST00000408061 R4GN34 69 aa4.79□□□□□ -1.64
SNORD88C-201ENST00000408061 K7ERS5 55 aa4.78□□□□□ -1.64
SNORD88C-201ENST00000408061 KRTAP13-4Q3LI77 160 aa4.74□□□□□ -1.65
SNORD88C-201ENST00000408061 A8MU10 97 aa4.72□□□□□ -1.65
SNORD88C-201ENST00000408061 FAT4Q6V0I7 4981 aa4.71□□□□□ -1.66
SNORD88C-201ENST00000408061 A6NN06 94 aa4.7□□□□□ -1.66
SNORD88C-201ENST00000408061 PMAIP1Q13794 54 aa4.69□□□□□ -1.66
SNORD88C-201ENST00000408061 KRTAP9-8Q9BYQ0 159 aa4.68□□□□□ -1.66
SNORD88C-201ENST00000408061 LCE2AQ5TA79 106 aaPredicted RBP4.67□□□□□ -1.66
SNORD88C-201ENST00000408061 A0A0D9SG42 100 aa4.66□□□□□ -1.66
SNORD88C-201ENST00000408061 MT2AP02795 61 aa4.66□□□□□ -1.66
SNORD88C-201ENST00000408061 LORP23490 312 aaPredicted RBP4.66□□□□□ -1.66
SNORD88C-201ENST00000408061 KRTAP10-10P60014 251 aa4.65□□□□□ -1.67
SNORD88C-201ENST00000408061 SPRR2GQ9BYE4 73 aa4.65□□□□□ -1.67
SNORD88C-201ENST00000408061 KRTAP12-1P59990 96 aa4.62□□□□□ -1.67
SNORD88C-201ENST00000408061 LINC01554Q52M75 96 aa4.61□□□□□ -1.67
SNORD88C-201ENST00000408061 MT1FP04733 61 aa4.6□□□□□ -1.67
SNORD88C-201ENST00000408061 SPINT4Q6UDR6 99 aa4.6□□□□□ -1.67
SNORD88C-201ENST00000408061 KRTAP12-2P59991 146 aa4.57□□□□□ -1.68
SNORD88C-201ENST00000408061 KRTAP19-1Q8IUB9 90 aa4.57□□□□□ -1.68
SNORD88C-201ENST00000408061 KRTAP19-8Q3LI54 63 aa4.53□□□□□ -1.68
SNORD88C-201ENST00000408061 PLAC4Q8WY50 150 aa4.52□□□□□ -1.69
SNORD88C-201ENST00000408061 KRTAP9-3Q9BYQ3 159 aa4.52□□□□□ -1.69
SNORD88C-201ENST00000408061 ROMO1P60602 79 aa4.51□□□□□ -1.69
SNORD88C-201ENST00000408061 KTN1-AS1Q86SY8 53 aa4.5□□□□□ -1.69
SNORD88C-201ENST00000408061 SVIPQ8NHG7 77 aa4.5□□□□□ -1.69
SNORD88C-201ENST00000408061 CAMK2N1Q7Z7J9 78 aa4.48□□□□□ -1.69
SNORD88C-201ENST00000408061 MT1BP07438 61 aa4.39□□□□□ -1.71
SNORD88C-201ENST00000408061 KRTAP25-1Q3LHN0 102 aa4.36□□□□□ -1.71
SNORD88C-201ENST00000408061 C10orf95Q9H7T3 257 aa4.35□□□□□ -1.71
SNORD88C-201ENST00000408061 LCE2BO14633 110 aa4.34□□□□□ -1.71
SNORD88C-201ENST00000408061 PRO2289Q9P1D8 64 aa4.33□□□□□ -1.72
SNORD88C-201ENST00000408061 TNP1P09430 55 aa4.31□□□□□ -1.72
SNORD88C-201ENST00000408061 LCE2DQ5TA82 110 aaPredicted RBP4.3□□□□□ -1.72
SNORD88C-201ENST00000408061 KRTAP23-1A1A580 65 aa4.28□□□□□ -1.72
SNORD88C-201ENST00000408061 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
SNORD88C-201ENST00000408061 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
SNORD88C-201ENST00000408061 KRTAP10-5P60370 271 aa4.25□□□□□ -1.73
SNORD88C-201ENST00000408061 MT1XP80297 61 aa4.24□□□□□ -1.73
SNORD88C-201ENST00000408061 KRTAP19-6Q3LI70 58 aa4.16□□□□□ -1.74
SNORD88C-201ENST00000408061 USH2AO75445 5202 aa4.1□□□□□ -1.75
SNORD88C-201ENST00000408061 KRTAP10-12P60413 245 aa4.08□□□□□ -1.76
SNORD88C-201ENST00000408061 KRTAP10-7P60409 375 aaPredicted RBP4.04□□□□□ -1.76
SNORD88C-201ENST00000408061 KRTAP8-1Q8IUC2 63 aa4.03□□□□□ -1.76
SNORD88C-201ENST00000408061 KRTAP9-2Q9BYQ4 174 aa4.02□□□□□ -1.77
SNORD88C-201ENST00000408061 LCE3AQ5TA76 89 aa4.01□□□□□ -1.77
SNORD88C-201ENST00000408061 SSPOA2VEC9 5147 aa4□□□□□ -1.77
SNORD88C-201ENST00000408061 CRCT1Q9UGL9 99 aa3.92□□□□□ -1.78
SNORD88C-201ENST00000408061 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
SNORD88C-201ENST00000408061 KRTAP19-4Q3LI73 84 aa3.89□□□□□ -1.79
SNORD88C-201ENST00000408061 KRTAP15-1Q3LI76 137 aa3.86□□□□□ -1.79
SNORD88C-201ENST00000408061 KRTAP4-8A0A0G2JLE6 195 aa3.85□□□□□ -1.79
SNORD88C-201ENST00000408061 KRTAP4-8Q9BYQ9 185 aa3.85□□□□□ -1.79
SNORD88C-201ENST00000408061 KRTAP19-5Q3LI72 72 aa3.83□□□□□ -1.8
SNORD88C-201ENST00000408061 FCGBPQ9Y6R7 5405 aaPredicted RBP3.81□□□□□ -1.8
SNORD88C-201ENST00000408061 FSIP2Q5CZC0 6907 aa3.81□□□□□ -1.8
SNORD88C-201ENST00000408061 KRTAP19-7Q3SYF9 63 aa3.79□□□□□ -1.8
SNORD88C-201ENST00000408061 MT1EP04732 61 aa3.73□□□□□ -1.81
SNORD88C-201ENST00000408061 KRTAP9-6A0A140TA67 174 aa3.71□□□□□ -1.82
SNORD88C-201ENST00000408061 SPRR5A0A1B0GTR4 108 aa3.71□□□□□ -1.82
SNORD88C-201ENST00000408061 MT1LQ93083 61 aa3.67□□□□□ -1.82
SNORD88C-201ENST00000408061 KRTAP5-9P26371 169 aa3.66□□□□□ -1.82
SNORD88C-201ENST00000408061 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
SNORD88C-201ENST00000408061 KMT2DO14686 5537 aa3.65□□□□□ -1.83
SNORD88C-201ENST00000408061 LUZP6Q538Z0 58 aa3.64□□□□□ -1.83
SNORD88C-201ENST00000408061 MT1GP13640 62 aa3.63□□□□□ -1.83
SNORD88C-201ENST00000408061 SPRR2FQ96RM1 72 aa3.63□□□□□ -1.83
SNORD88C-201ENST00000408061 KRTAP19-3Q7Z4W3 81 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms