RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 TRAV7A0A075B6U4 112 aa4.29□□□□□ -1.72
GPC3-203ENST00000406757 LINC00208Q96KT6 92 aa4.29□□□□□ -1.72
GPC3-203ENST00000406757 C1orf64Q8NEQ6 169 aa4.28□□□□□ -1.72
GPC3-203ENST00000406757 HRES1P13985 223 aa4.27□□□□□ -1.73
GPC3-203ENST00000406757 MP68P56378 58 aa4.27□□□□□ -1.73
GPC3-203ENST00000406757 C5orf47Q569G3 176 aa4.27□□□□□ -1.73
GPC3-203ENST00000406757 SMIM20Q8N5G0 67 aa4.27□□□□□ -1.73
GPC3-203ENST00000406757 C7orf65Q6ZTY9 151 aa4.26□□□□□ -1.73
GPC3-203ENST00000406757 SERP2Q8N6R1 65 aa4.26□□□□□ -1.73
GPC3-203ENST00000406757 CYP4F30PQ9H0H9 118 aa4.26□□□□□ -1.73
GPC3-203ENST00000406757 SNURFQ9Y675 71 aa4.25□□□□□ -1.73
GPC3-203ENST00000406757 LOC101927531A0A1B0GV80 90 aa4.24□□□□□ -1.73
GPC3-203ENST00000406757 KRTAP10-6P60371 365 aaPredicted RBP4.24□□□□□ -1.73
GPC3-203ENST00000406757 KLKP1Q107X0 134 aa4.24□□□□□ -1.73
GPC3-203ENST00000406757 ANAPC13Q9BS18 74 aa4.24□□□□□ -1.73
GPC3-203ENST00000406757 C4orf26Q17RF5 130 aa4.23□□□□□ -1.73
GPC3-203ENST00000406757 C20orf197Q8N268 126 aa4.23□□□□□ -1.73
GPC3-203ENST00000406757 FLGP20930 4061 aaPredicted RBP4.22□□□□□ -1.73
GPC3-203ENST00000406757 M0R2T5 61 aa4.22□□□□□ -1.73
GPC3-203ENST00000406757 COX7CP15954 63 aa4.22□□□□□ -1.73
GPC3-203ENST00000406757 FAM236DA0A1B0GTK5 79 aa4.2□□□□□ -1.74
GPC3-203ENST00000406757 H3BPC8 53 aa4.2□□□□□ -1.74
GPC3-203ENST00000406757 FAM236CP0DP71 79 aa4.2□□□□□ -1.74
GPC3-203ENST00000406757 COX6B2Q6YFQ2 88 aa4.2□□□□□ -1.74
GPC3-203ENST00000406757 MPLKIPQ8TAP9 179 aa4.2□□□□□ -1.74
GPC3-203ENST00000406757 CCDC179H3BU77 68 aa4.19□□□□□ -1.74
GPC3-203ENST00000406757 RBM12B-AS1Q9P1G2 102 aa4.19□□□□□ -1.74
GPC3-203ENST00000406757 PCP4P48539 62 aa4.17□□□□□ -1.74
GPC3-203ENST00000406757 CYSTM1Q9H1C7 97 aa4.17□□□□□ -1.74
GPC3-203ENST00000406757 H1FX-AS1Q4G0G2 97 aa4.11□□□□□ -1.75
GPC3-203ENST00000406757 USH2AO75445 5202 aa4.1□□□□□ -1.75
GPC3-203ENST00000406757 H7BZZ5 65 aa4.09□□□□□ -1.75
GPC3-203ENST00000406757 SSPOA2VEC9 5147 aa4.08□□□□□ -1.76
GPC3-203ENST00000406757 DMAC1Q96GE9 116 aa4.06□□□□□ -1.76
GPC3-203ENST00000406757 S4R3F8 94 aa4.06□□□□□ -1.76
GPC3-203ENST00000406757 NDUFC1O43677 76 aa4.05□□□□□ -1.76
GPC3-203ENST00000406757 LCA10Q71F78 164 aa4.05□□□□□ -1.76
GPC3-203ENST00000406757 SPANXA2-OT1Q8N9U9 137 aa4.04□□□□□ -1.76
GPC3-203ENST00000406757 A8MUN3 132 aa4.03□□□□□ -1.76
GPC3-203ENST00000406757 ACYP2P14621 99 aa4.03□□□□□ -1.76
GPC3-203ENST00000406757 FCGBPQ9Y6R7 5405 aaPredicted RBP4□□□□□ -1.77
GPC3-203ENST00000406757 MACF1Q9UPN3 7388 aaKnown RBP3.99□□□□□ -1.77
GPC3-203ENST00000406757 CHKB-CPT1BH3BT56 60 aa3.98□□□□□ -1.77
GPC3-203ENST00000406757 CSAG1Q6PB30 78 aa3.97□□□□□ -1.77
GPC3-203ENST00000406757 COA5Q86WW8 74 aa3.97□□□□□ -1.77
GPC3-203ENST00000406757 MT2AP02795 61 aa3.96□□□□□ -1.78
GPC3-203ENST00000406757 TMEM258P61165 79 aa3.96□□□□□ -1.78
GPC3-203ENST00000406757 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
GPC3-203ENST00000406757 MT1FP04733 61 aa3.93□□□□□ -1.78
GPC3-203ENST00000406757 ATP5EP56381 51 aaPredicted RBP3.92□□□□□ -1.78
GPC3-203ENST00000406757 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
GPC3-203ENST00000406757 A0A0A0MQY5 61 aa3.91□□□□□ -1.78
GPC3-203ENST00000406757 KRTAP10-10P60014 251 aa3.91□□□□□ -1.78
GPC3-203ENST00000406757 ADM2Q7Z4H4 148 aa3.88□□□□□ -1.79
GPC3-203ENST00000406757 SPTSSBQ8NFR3 76 aa3.88□□□□□ -1.79
GPC3-203ENST00000406757 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
GPC3-203ENST00000406757 SERP1Q9Y6X1 66 aa3.85□□□□□ -1.79
GPC3-203ENST00000406757 P0C880 135 aa3.84□□□□□ -1.79
GPC3-203ENST00000406757 KRTAP10-7P60409 375 aaPredicted RBP3.82□□□□□ -1.8
GPC3-203ENST00000406757 KRTAP19-6Q3LI70 58 aa3.82□□□□□ -1.8
GPC3-203ENST00000406757 H0YAA0 97 aa3.81□□□□□ -1.8
GPC3-203ENST00000406757 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
GPC3-203ENST00000406757 SEC61GP60059 68 aa3.76□□□□□ -1.81
GPC3-203ENST00000406757 A0A1B0GU69 56 aa3.75□□□□□ -1.81
GPC3-203ENST00000406757 KRTAP6-3Q3LI67 103 aa3.75□□□□□ -1.81
GPC3-203ENST00000406757 LINC01558Q9Y6Z2 57 aa3.75□□□□□ -1.81
GPC3-203ENST00000406757 RPS28P62857 69 aaKnown RBP3.74□□□□□ -1.81
GPC3-203ENST00000406757 SMIM26A0A096LP01 95 aa3.73□□□□□ -1.81
GPC3-203ENST00000406757 M0QZ58 72 aa3.73□□□□□ -1.81
GPC3-203ENST00000406757 PRR15LQ9BU68 103 aa3.72□□□□□ -1.81
GPC3-203ENST00000406757 R4GN34 69 aa3.72□□□□□ -1.81
GPC3-203ENST00000406757 KRTAP13-4Q3LI77 160 aa3.71□□□□□ -1.82
GPC3-203ENST00000406757 CRIPTQ9P021 101 aa3.71□□□□□ -1.82
GPC3-203ENST00000406757 A0A1B0GU33 70 aa3.7□□□□□ -1.82
GPC3-203ENST00000406757 PSPHP1O15172 72 aa3.7□□□□□ -1.82
GPC3-203ENST00000406757 LINC01554Q52M75 96 aa3.7□□□□□ -1.82
GPC3-203ENST00000406757 SPRR2GQ9BYE4 73 aa3.7□□□□□ -1.82
GPC3-203ENST00000406757 NEBP20929 6669 aa3.69□□□□□ -1.82
GPC3-203ENST00000406757 Q1T7F1 81 aa3.69□□□□□ -1.82
GPC3-203ENST00000406757 SPATA8Q6RVD6 105 aa3.69□□□□□ -1.82
GPC3-203ENST00000406757 MUC12Q9UKN1 5478 aa3.68□□□□□ -1.82
GPC3-203ENST00000406757 V9GYY9 64 aa3.66□□□□□ -1.82
GPC3-203ENST00000406757 A0A0D9SG42 100 aa3.65□□□□□ -1.83
GPC3-203ENST00000406757 MT1BP07438 61 aa3.64□□□□□ -1.83
GPC3-203ENST00000406757 KRTAP19-8Q3LI54 63 aa3.64□□□□□ -1.83
GPC3-203ENST00000406757 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
GPC3-203ENST00000406757 Q5VV11 94 aa3.63□□□□□ -1.83
GPC3-203ENST00000406757 A8MU10 97 aa3.62□□□□□ -1.83
GPC3-203ENST00000406757 A6NN06 94 aa3.59□□□□□ -1.83
GPC3-203ENST00000406757 UQCR11O14957 56 aa3.58□□□□□ -1.84
GPC3-203ENST00000406757 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
GPC3-203ENST00000406757 KRTAP20-1Q3LI63 56 aa3.57□□□□□ -1.84
GPC3-203ENST00000406757 PLAC4Q8WY50 150 aa3.57□□□□□ -1.84
GPC3-203ENST00000406757 MIR22HGQ0VDD5 57 aa3.56□□□□□ -1.84
GPC3-203ENST00000406757 SPINT4Q6UDR6 99 aa3.56□□□□□ -1.84
GPC3-203ENST00000406757 A6NED7 52 aa3.55□□□□□ -1.84
GPC3-203ENST00000406757 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
GPC3-203ENST00000406757 KRTAP12-1P59990 96 aa3.53□□□□□ -1.84
GPC3-203ENST00000406757 KRTAP12-2P59991 146 aa3.53□□□□□ -1.84
GPC3-203ENST00000406757 KMT2DO14686 5537 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms