RNA–Protein interactions for RNA: ENST00000406506.3

HOXD12-202, Transcript of homeobox D12, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXD12, Length 1,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12-202ENST00000406506 CCDC179H3BU77 68 aa9.13□□□□□ -0.95
HOXD12-202ENST00000406506 NDUFC1O43677 76 aa9.13□□□□□ -0.95
HOXD12-202ENST00000406506 A8MUN3 132 aa9.11□□□□□ -0.95
HOXD12-202ENST00000406506 SPANXA2-OT1Q8N9U9 137 aa9.09□□□□□ -0.95
HOXD12-202ENST00000406506 CYSTM1Q9H1C7 97 aa9.08□□□□□ -0.96
HOXD12-202ENST00000406506 H7BZZ5 65 aa9.06□□□□□ -0.96
HOXD12-202ENST00000406506 DMAC1Q96GE9 116 aa9.06□□□□□ -0.96
HOXD12-202ENST00000406506 KRTAP9-3Q9BYQ3 159 aa9.06□□□□□ -0.96
HOXD12-202ENST00000406506 FSIP2Q5CZC0 6907 aa9.06□□□□□ -0.96
HOXD12-202ENST00000406506 CSAG1Q6PB30 78 aa9.05□□□□□ -0.96
HOXD12-202ENST00000406506 KRTAP3-3Q9BYR6 98 aa9.04□□□□□ -0.96
HOXD12-202ENST00000406506 KRTAP9-6A0A140TA67 174 aa9.02□□□□□ -0.97
HOXD12-202ENST00000406506 USH2AO75445 5202 aa8.99□□□□□ -0.97
HOXD12-202ENST00000406506 CRCT1Q9UGL9 99 aa8.99□□□□□ -0.97
HOXD12-202ENST00000406506 LCE2BO14633 110 aa8.96□□□□□ -0.98
HOXD12-202ENST00000406506 ACYP2P14621 99 aa8.96□□□□□ -0.98
HOXD12-202ENST00000406506 PCP4P48539 62 aa8.93□□□□□ -0.98
HOXD12-202ENST00000406506 ATP5EP56381 51 aaPredicted RBP8.86□□□□□ -0.99
HOXD12-202ENST00000406506 TMEM258P61165 79 aa8.85□□□□□ -0.99
HOXD12-202ENST00000406506 SSPOA2VEC9 5147 aa8.84□□□□□ -0.99
HOXD12-202ENST00000406506 H0YAA0 97 aa8.78□□□□□ -1
HOXD12-202ENST00000406506 CHKB-CPT1BH3BT56 60 aa8.76□□□□□ -1.01
HOXD12-202ENST00000406506 COA5Q86WW8 74 aa8.76□□□□□ -1.01
HOXD12-202ENST00000406506 KRTAP19-1Q8IUB9 90 aa8.76□□□□□ -1.01
HOXD12-202ENST00000406506 SPTSSBQ8NFR3 76 aa8.72□□□□□ -1.01
HOXD12-202ENST00000406506 SPRR2GQ9BYE4 73 aa8.7□□□□□ -1.02
HOXD12-202ENST00000406506 ADM2Q7Z4H4 148 aa8.68□□□□□ -1.02
HOXD12-202ENST00000406506 CRIPTQ9P021 101 aa8.65□□□□□ -1.02
HOXD12-202ENST00000406506 KRTAP19-8Q3LI54 63 aa8.58□□□□□ -1.04
HOXD12-202ENST00000406506 KRTAP19-6Q3LI70 58 aa8.58□□□□□ -1.04
HOXD12-202ENST00000406506 FCGBPQ9Y6R7 5405 aaPredicted RBP8.58□□□□□ -1.04
HOXD12-202ENST00000406506 SERP1Q9Y6X1 66 aa8.57□□□□□ -1.04
HOXD12-202ENST00000406506 MT1BP07438 61 aa8.55□□□□□ -1.04
HOXD12-202ENST00000406506 Q5VV11 94 aa8.55□□□□□ -1.04
HOXD12-202ENST00000406506 P0C880 135 aa8.54□□□□□ -1.04
HOXD12-202ENST00000406506 KRTAP3-2Q9BYR7 98 aa8.52□□□□□ -1.05
HOXD12-202ENST00000406506 R4GN34 69 aa8.43□□□□□ -1.06
HOXD12-202ENST00000406506 RPS28P62857 69 aaKnown RBP8.42□□□□□ -1.06
HOXD12-202ENST00000406506 M0QZ58 72 aa8.39□□□□□ -1.07
HOXD12-202ENST00000406506 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.36□□□□□ -1.07
HOXD12-202ENST00000406506 SEC61GP60059 68 aa8.36□□□□□ -1.07
HOXD12-202ENST00000406506 LINC01558Q9Y6Z2 57 aa8.34□□□□□ -1.07
HOXD12-202ENST00000406506 A6NN06 94 aa8.3□□□□□ -1.08
HOXD12-202ENST00000406506 A0A1B0GU69 56 aa8.29□□□□□ -1.08
HOXD12-202ENST00000406506 SMIM26A0A096LP01 95 aa8.29□□□□□ -1.08
HOXD12-202ENST00000406506 KRTAP10-5P60370 271 aa8.28□□□□□ -1.08
HOXD12-202ENST00000406506 V9GYY9 64 aa8.26□□□□□ -1.09
HOXD12-202ENST00000406506 Q1T7F1 81 aa8.24□□□□□ -1.09
HOXD12-202ENST00000406506 LINC01554Q52M75 96 aa8.24□□□□□ -1.09
HOXD12-202ENST00000406506 PRR15LQ9BU68 103 aa8.24□□□□□ -1.09
HOXD12-202ENST00000406506 PLAC4Q8WY50 150 aa8.21□□□□□ -1.1
HOXD12-202ENST00000406506 MACF1Q9UPN3 7388 aaKnown RBP8.21□□□□□ -1.1
HOXD12-202ENST00000406506 A0A1B0GU33 70 aa8.17□□□□□ -1.1
HOXD12-202ENST00000406506 KRTAP9-7A8MTY7 169 aa8.15□□□□□ -1.1
HOXD12-202ENST00000406506 KRTAP13-4Q3LI77 160 aa8.13□□□□□ -1.11
HOXD12-202ENST00000406506 MT1XP80297 61 aa8.1□□□□□ -1.11
HOXD12-202ENST00000406506 PRO2289Q9P1D8 64 aa8.08□□□□□ -1.12
HOXD12-202ENST00000406506 SYNE2Q8WXH0 6885 aaKnown RBP8.04□□□□□ -1.12
HOXD12-202ENST00000406506 PSPHP1O15172 72 aa8.03□□□□□ -1.12
HOXD12-202ENST00000406506 SPATA8Q6RVD6 105 aa8.02□□□□□ -1.13
HOXD12-202ENST00000406506 UQCR11O14957 56 aa8□□□□□ -1.13
HOXD12-202ENST00000406506 KRTAP6-3Q3LI67 103 aa7.92□□□□□ -1.14
HOXD12-202ENST00000406506 A0A0D9SG42 100 aa7.89□□□□□ -1.15
HOXD12-202ENST00000406506 MIR22HGQ0VDD5 57 aa7.86□□□□□ -1.15
HOXD12-202ENST00000406506 A8MU10 97 aa7.84□□□□□ -1.15
HOXD12-202ENST00000406506 KRTAP12-2P59991 146 aa7.83□□□□□ -1.16
HOXD12-202ENST00000406506 A6NED7 52 aa7.81□□□□□ -1.16
HOXD12-202ENST00000406506 KRTAP12-1P59990 96 aa7.79□□□□□ -1.16
HOXD12-202ENST00000406506 CAMK2N1Q7Z7J9 78 aa7.79□□□□□ -1.16
HOXD12-202ENST00000406506 KMT2DO14686 5537 aa7.79□□□□□ -1.16
HOXD12-202ENST00000406506 SPINT4Q6UDR6 99 aa7.75□□□□□ -1.17
HOXD12-202ENST00000406506 KRTAP10-7P60409 375 aaPredicted RBP7.74□□□□□ -1.17
HOXD12-202ENST00000406506 KRTAP5-9P26371 169 aa7.72□□□□□ -1.17
HOXD12-202ENST00000406506 KRTAP10-12P60413 245 aa7.69□□□□□ -1.18
HOXD12-202ENST00000406506 CDC42SE1Q9NRR8 79 aa7.67□□□□□ -1.18
HOXD12-202ENST00000406506 MUC12Q9UKN1 5478 aa7.65□□□□□ -1.18
HOXD12-202ENST00000406506 KRTAP8-1Q8IUC2 63 aa7.64□□□□□ -1.19
HOXD12-202ENST00000406506 KRTAP4-8A0A0G2JLE6 195 aa7.62□□□□□ -1.19
HOXD12-202ENST00000406506 KRTAP4-8Q9BYQ9 185 aa7.62□□□□□ -1.19
HOXD12-202ENST00000406506 K7ERS5 55 aa7.57□□□□□ -1.2
HOXD12-202ENST00000406506 SPRR2FQ96RM1 72 aa7.56□□□□□ -1.2
HOXD12-202ENST00000406506 MDN1Q9NU22 5596 aa7.52□□□□□ -1.2
HOXD12-202ENST00000406506 NEBP20929 6669 aa7.52□□□□□ -1.21
HOXD12-202ENST00000406506 BRK1Q8WUW1 75 aa7.43□□□□□ -1.22
HOXD12-202ENST00000406506 C10orf95Q9H7T3 257 aa7.39□□□□□ -1.23
HOXD12-202ENST00000406506 SPRR2EP22531 72 aa7.37□□□□□ -1.23
HOXD12-202ENST00000406506 SPRR2BP35325 72 aa7.37□□□□□ -1.23
HOXD12-202ENST00000406506 SPRR2AP35326 72 aa7.37□□□□□ -1.23
HOXD12-202ENST00000406506 LCE1AQ5T7P2 110 aa7.32□□□□□ -1.24
HOXD12-202ENST00000406506 TNP1P09430 55 aa7.27□□□□□ -1.24
HOXD12-202ENST00000406506 KRTAP19-7Q3SYF9 63 aa7.24□□□□□ -1.25
HOXD12-202ENST00000406506 ROMO1P60602 79 aa7.2□□□□□ -1.26
HOXD12-202ENST00000406506 KRTAP20-1Q3LI63 56 aa7.18□□□□□ -1.26
HOXD12-202ENST00000406506 KRTAP25-1Q3LHN0 102 aa7.17□□□□□ -1.26
HOXD12-202ENST00000406506 MT1EP04732 61 aa7.16□□□□□ -1.26
HOXD12-202ENST00000406506 LCE3AQ5TA76 89 aa7.15□□□□□ -1.26
HOXD12-202ENST00000406506 KRTAP19-5Q3LI72 72 aa7.13□□□□□ -1.27
HOXD12-202ENST00000406506 SPRR2DP22532 72 aa7.12□□□□□ -1.27
HOXD12-202ENST00000406506 PRO0628Q9UI54 55 aa7.12□□□□□ -1.27
HOXD12-202ENST00000406506 KRTAP2-3P0C7H8 128 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms