RNA–Protein interactions for RNA: ENST00000405878.5

XRCC6-205, Transcript of X-ray repair cross complementing 6, humanhuman

APPRIS P1 TSL 5 BASIC

Gene XRCC6, Length 2,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-205ENST00000405878 A8MUU9 505 aa5.77□□□□□ -1.49
XRCC6-205ENST00000405878 SPINK1P00995 79 aa5.76□□□□□ -1.49
XRCC6-205ENST00000405878 KRTAP25-1Q3LHN0 102 aa5.76□□□□□ -1.49
XRCC6-205ENST00000405878 KRTAP3-3Q9BYR6 98 aa5.76□□□□□ -1.49
XRCC6-205ENST00000405878 KRTAP3-2Q9BYR7 98 aa5.76□□□□□ -1.49
XRCC6-205ENST00000405878 MT1HL1P0DM35 61 aa5.74□□□□□ -1.49
XRCC6-205ENST00000405878 H0YAA0 97 aa5.74□□□□□ -1.49
XRCC6-205ENST00000405878 ROMO1P60602 79 aa5.72□□□□□ -1.49
XRCC6-205ENST00000405878 LINC00304Q8N9R0 145 aa5.72□□□□□ -1.49
XRCC6-205ENST00000405878 HMCN2Q8NDA2 5059 aa5.72□□□□□ -1.49
XRCC6-205ENST00000405878 KRTAP13-2Q52LG2 175 aa5.71□□□□□ -1.49
XRCC6-205ENST00000405878 TNXBP22105 4242 aa5.7□□□□□ -1.5
XRCC6-205ENST00000405878 UBR4Q5T4S7 5183 aa5.67□□□□□ -1.5
XRCC6-205ENST00000405878 A0A1B0GU33 70 aa5.67□□□□□ -1.5
XRCC6-205ENST00000405878 TYMSOSQ8TAI1 123 aa5.66□□□□□ -1.5
XRCC6-205ENST00000405878 H1FX-AS1Q4G0G2 97 aa5.63□□□□□ -1.51
XRCC6-205ENST00000405878 KRTAP10-8P60410 259 aa5.61□□□□□ -1.51
XRCC6-205ENST00000405878 K7ERS5 55 aa5.59□□□□□ -1.51
XRCC6-205ENST00000405878 KRTAP1-4P0C5Y4 121 aa5.58□□□□□ -1.52
XRCC6-205ENST00000405878 LRP2P98164 4655 aa5.55□□□□□ -1.52
XRCC6-205ENST00000405878 KRTAP3-1Q9BYR8 98 aa5.55□□□□□ -1.52
XRCC6-205ENST00000405878 P0C880 135 aa5.54□□□□□ -1.52
XRCC6-205ENST00000405878 CRIPTQ9P021 101 aa5.54□□□□□ -1.52
XRCC6-205ENST00000405878 COX6B2Q6YFQ2 88 aa5.5□□□□□ -1.53
XRCC6-205ENST00000405878 RPS29P62273 56 aaKnown RBP5.48□□□□□ -1.53
XRCC6-205ENST00000405878 RNF213Q63HN8 5207 aa5.48□□□□□ -1.53
XRCC6-205ENST00000405878 C20orf166-AS1Q96NR2 134 aa5.47□□□□□ -1.53
XRCC6-205ENST00000405878 LPAP08519 4548 aa5.47□□□□□ -1.53
XRCC6-205ENST00000405878 RPL37P61927 97 aaKnown RBP5.43□□□□□ -1.54
XRCC6-205ENST00000405878 SPINT4Q6UDR6 99 aa5.42□□□□□ -1.54
XRCC6-205ENST00000405878 C9orf92A6NGG3 77 aa5.42□□□□□ -1.54
XRCC6-205ENST00000405878 TPRXLQ17RH7 258 aa5.39□□□□□ -1.55
XRCC6-205ENST00000405878 KRTAP10-6P60371 365 aaPredicted RBP5.36□□□□□ -1.55
XRCC6-205ENST00000405878 MUC2Q02817 5179 aa5.35□□□□□ -1.55
XRCC6-205ENST00000405878 KRTAP13-4Q3LI77 160 aa5.33□□□□□ -1.56
XRCC6-205ENST00000405878 A0A0D9SG42 100 aa5.33□□□□□ -1.56
XRCC6-205ENST00000405878 KRTAP15-1Q3LI76 137 aa5.33□□□□□ -1.56
XRCC6-205ENST00000405878 NDUFAF8A1L188 74 aa5.31□□□□□ -1.56
XRCC6-205ENST00000405878 KRTAP9-2Q9BYQ4 174 aa5.3□□□□□ -1.56
XRCC6-205ENST00000405878 C10orf95Q9H7T3 257 aa5.3□□□□□ -1.56
XRCC6-205ENST00000405878 LCE2AQ5TA79 106 aaPredicted RBP5.26□□□□□ -1.57
XRCC6-205ENST00000405878 S4R3F8 94 aa5.24□□□□□ -1.57
XRCC6-205ENST00000405878 KRTAP9-6A0A140TA67 174 aa5.22□□□□□ -1.57
XRCC6-205ENST00000405878 KRTAP12-2P59991 146 aa5.2□□□□□ -1.58
XRCC6-205ENST00000405878 XP32Q5T750 250 aa5.15□□□□□ -1.58
XRCC6-205ENST00000405878 KRTAP12-1P59990 96 aa5.15□□□□□ -1.59
XRCC6-205ENST00000405878 MUC17Q685J3 4493 aa5.14□□□□□ -1.59
XRCC6-205ENST00000405878 FAT4Q6V0I7 4981 aa5.12□□□□□ -1.59
XRCC6-205ENST00000405878 SEC61BP60468 96 aaKnown RBP5.07□□□□□ -1.6
XRCC6-205ENST00000405878 M0QZ58 72 aa5.07□□□□□ -1.6
XRCC6-205ENST00000405878 KRTAP4-1Q9BYQ7 146 aa5.03□□□□□ -1.6
XRCC6-205ENST00000405878 CRCT1Q9UGL9 99 aa4.99□□□□□ -1.61
XRCC6-205ENST00000405878 LCE2BO14633 110 aa4.97□□□□□ -1.61
XRCC6-205ENST00000405878 A0A0A0MQY5 61 aa4.96□□□□□ -1.62
XRCC6-205ENST00000405878 PLAC4Q8WY50 150 aa4.95□□□□□ -1.62
XRCC6-205ENST00000405878 LCE2CQ5TA81 110 aa4.95□□□□□ -1.62
XRCC6-205ENST00000405878 LUZP6Q538Z0 58 aa4.92□□□□□ -1.62
XRCC6-205ENST00000405878 KRTAP19-2Q3LHN2 52 aa4.91□□□□□ -1.62
XRCC6-205ENST00000405878 MT1HP80294 61 aa4.9□□□□□ -1.63
XRCC6-205ENST00000405878 R4GN34 69 aa4.85□□□□□ -1.63
XRCC6-205ENST00000405878 FSIP2Q5CZC0 6907 aa4.85□□□□□ -1.63
XRCC6-205ENST00000405878 LORP23490 312 aaPredicted RBP4.84□□□□□ -1.63
XRCC6-205ENST00000405878 M0R2T5 61 aa4.82□□□□□ -1.64
XRCC6-205ENST00000405878 FLGP20930 4061 aaPredicted RBP4.79□□□□□ -1.64
XRCC6-205ENST00000405878 PP632Q6XCG6 107 aa4.78□□□□□ -1.64
XRCC6-205ENST00000405878 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.67
XRCC6-205ENST00000405878 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.64□□□□□ -1.67
XRCC6-205ENST00000405878 CAMK2N1Q7Z7J9 78 aa4.64□□□□□ -1.67
XRCC6-205ENST00000405878 KRTAP9-8Q9BYQ0 159 aa4.61□□□□□ -1.67
XRCC6-205ENST00000405878 SPRR5A0A1B0GTR4 108 aa4.57□□□□□ -1.68
XRCC6-205ENST00000405878 KRTAP23-1A1A580 65 aa4.56□□□□□ -1.68
XRCC6-205ENST00000405878 MT2AP02795 61 aa4.52□□□□□ -1.69
XRCC6-205ENST00000405878 TNP1P09430 55 aa4.52□□□□□ -1.69
XRCC6-205ENST00000405878 USH2AO75445 5202 aa4.51□□□□□ -1.69
XRCC6-205ENST00000405878 KRTAP19-1Q8IUB9 90 aa4.49□□□□□ -1.69
XRCC6-205ENST00000405878 MT1FP04733 61 aa4.48□□□□□ -1.69
XRCC6-205ENST00000405878 KRTAP9-3Q9BYQ3 159 aa4.48□□□□□ -1.69
XRCC6-205ENST00000405878 SSPOA2VEC9 5147 aa4.47□□□□□ -1.69
XRCC6-205ENST00000405878 KRTAP10-10P60014 251 aa4.47□□□□□ -1.69
XRCC6-205ENST00000405878 FCGBPQ9Y6R7 5405 aaPredicted RBP4.42□□□□□ -1.7
XRCC6-205ENST00000405878 KRTAP19-6Q3LI70 58 aa4.38□□□□□ -1.71
XRCC6-205ENST00000405878 PRO2289Q9P1D8 64 aa4.38□□□□□ -1.71
XRCC6-205ENST00000405878 KRTAP6-3Q3LI67 103 aa4.3□□□□□ -1.72
XRCC6-205ENST00000405878 MACF1Q9UPN3 7388 aaKnown RBP4.3□□□□□ -1.72
XRCC6-205ENST00000405878 INE1O15225 51 aa4.29□□□□□ -1.72
XRCC6-205ENST00000405878 SYNE2Q8WXH0 6885 aaKnown RBP4.28□□□□□ -1.73
XRCC6-205ENST00000405878 LCE3AQ5TA76 89 aa4.21□□□□□ -1.74
XRCC6-205ENST00000405878 SPRR2GQ9BYE4 73 aa4.19□□□□□ -1.74
XRCC6-205ENST00000405878 KRTAP8-1Q8IUC2 63 aa4.13□□□□□ -1.75
XRCC6-205ENST00000405878 MT1BP07438 61 aa4.09□□□□□ -1.76
XRCC6-205ENST00000405878 KRTAP19-8Q3LI54 63 aa4.06□□□□□ -1.76
XRCC6-205ENST00000405878 KRTAP20-1Q3LI63 56 aa4.06□□□□□ -1.76
XRCC6-205ENST00000405878 KRTAP10-5P60370 271 aa4.03□□□□□ -1.76
XRCC6-205ENST00000405878 NEBP20929 6669 aa4.03□□□□□ -1.76
XRCC6-205ENST00000405878 KRTAP12-3P60328 96 aa4.02□□□□□ -1.77
XRCC6-205ENST00000405878 KRTAP5-9P26371 169 aa4.01□□□□□ -1.77
XRCC6-205ENST00000405878 KRTAP10-12P60413 245 aa3.99□□□□□ -1.77
XRCC6-205ENST00000405878 MUC12Q9UKN1 5478 aa3.96□□□□□ -1.78
XRCC6-205ENST00000405878 KMT2DO14686 5537 aa3.93□□□□□ -1.78
XRCC6-205ENST00000405878 KRTAP2-3P0C7H8 128 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms