RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.4□□□□□ -1.06
PTPRN2-204ENST00000404321 CSAG1Q6PB30 78 aa8.39□□□□□ -1.07
PTPRN2-204ENST00000404321 H0Y9P7 68 aa8.38□□□□□ -1.07
PTPRN2-204ENST00000404321 SERP2Q8N6R1 65 aa8.37□□□□□ -1.07
PTPRN2-204ENST00000404321 MACF1Q9UPN3 7388 aaKnown RBP8.35□□□□□ -1.07
PTPRN2-204ENST00000404321 KRTAP19-6Q3LI70 58 aa8.32□□□□□ -1.08
PTPRN2-204ENST00000404321 SMIM20Q8N5G0 67 aa8.31□□□□□ -1.08
PTPRN2-204ENST00000404321 KRTAP3-3Q9BYR6 98 aa8.31□□□□□ -1.08
PTPRN2-204ENST00000404321 KRTAP9-7A8MTY7 169 aa8.27□□□□□ -1.09
PTPRN2-204ENST00000404321 LINC00208Q96KT6 92 aa8.26□□□□□ -1.09
PTPRN2-204ENST00000404321 SYNE2Q8WXH0 6885 aaKnown RBP8.26□□□□□ -1.09
PTPRN2-204ENST00000404321 TRAV7A0A075B6U4 112 aa8.24□□□□□ -1.09
PTPRN2-204ENST00000404321 TMEM258P61165 79 aa8.24□□□□□ -1.09
PTPRN2-204ENST00000404321 OCR1Q9BZK8 76 aa8.23□□□□□ -1.09
PTPRN2-204ENST00000404321 KLKP1Q107X0 134 aa8.22□□□□□ -1.09
PTPRN2-204ENST00000404321 MP68P56378 58 aa8.2□□□□□ -1.1
PTPRN2-204ENST00000404321 NDUFC1O43677 76 aa8.15□□□□□ -1.1
PTPRN2-204ENST00000404321 SPRR2GQ9BYE4 73 aa8.15□□□□□ -1.1
PTPRN2-204ENST00000404321 RPS28P62857 69 aaKnown RBP8.14□□□□□ -1.11
PTPRN2-204ENST00000404321 C20orf197Q8N268 126 aa8.13□□□□□ -1.11
PTPRN2-204ENST00000404321 CYSTM1Q9H1C7 97 aa8.13□□□□□ -1.11
PTPRN2-204ENST00000404321 MT1BP07438 61 aa8.12□□□□□ -1.11
PTPRN2-204ENST00000404321 A8MUN3 132 aa8.11□□□□□ -1.11
PTPRN2-204ENST00000404321 Q5VV11 94 aa8.11□□□□□ -1.11
PTPRN2-204ENST00000404321 KRTAP19-8Q3LI54 63 aa8.09□□□□□ -1.12
PTPRN2-204ENST00000404321 H3BPC8 53 aa8.04□□□□□ -1.12
PTPRN2-204ENST00000404321 ATP5EP56381 51 aaPredicted RBP8.04□□□□□ -1.12
PTPRN2-204ENST00000404321 H7BZZ5 65 aa8.03□□□□□ -1.12
PTPRN2-204ENST00000404321 CRIPTQ9P021 101 aa8.02□□□□□ -1.13
PTPRN2-204ENST00000404321 A6NN06 94 aa8.01□□□□□ -1.13
PTPRN2-204ENST00000404321 ADM2Q7Z4H4 148 aa8.01□□□□□ -1.13
PTPRN2-204ENST00000404321 H0YAA0 97 aa8□□□□□ -1.13
PTPRN2-204ENST00000404321 SNURFQ9Y675 71 aa7.99□□□□□ -1.13
PTPRN2-204ENST00000404321 SERP1Q9Y6X1 66 aa7.98□□□□□ -1.13
PTPRN2-204ENST00000404321 DMAC1Q96GE9 116 aa7.96□□□□□ -1.14
PTPRN2-204ENST00000404321 SVIPQ8NHG7 77 aa7.93□□□□□ -1.14
PTPRN2-204ENST00000404321 KRTAP10-5P60370 271 aa7.9□□□□□ -1.14
PTPRN2-204ENST00000404321 KRTAP6-3Q3LI67 103 aa7.85□□□□□ -1.15
PTPRN2-204ENST00000404321 P0C880 135 aa7.84□□□□□ -1.16
PTPRN2-204ENST00000404321 SMIM26A0A096LP01 95 aa7.83□□□□□ -1.16
PTPRN2-204ENST00000404321 R4GN34 69 aa7.78□□□□□ -1.16
PTPRN2-204ENST00000404321 ACYP2P14621 99 aa7.77□□□□□ -1.17
PTPRN2-204ENST00000404321 KRTAP3-2Q9BYR7 98 aa7.76□□□□□ -1.17
PTPRN2-204ENST00000404321 M0QZ58 72 aa7.74□□□□□ -1.17
PTPRN2-204ENST00000404321 NEBP20929 6669 aa7.74□□□□□ -1.17
PTPRN2-204ENST00000404321 PLAC4Q8WY50 150 aa7.7□□□□□ -1.18
PTPRN2-204ENST00000404321 SPANXA2-OT1Q8N9U9 137 aa7.69□□□□□ -1.18
PTPRN2-204ENST00000404321 CHKB-CPT1BH3BT56 60 aa7.67□□□□□ -1.18
PTPRN2-204ENST00000404321 LINC01554Q52M75 96 aa7.67□□□□□ -1.18
PTPRN2-204ENST00000404321 SPTSSBQ8NFR3 76 aa7.65□□□□□ -1.18
PTPRN2-204ENST00000404321 MT1XP80297 61 aa7.64□□□□□ -1.19
PTPRN2-204ENST00000404321 MUC12Q9UKN1 5478 aa7.64□□□□□ -1.19
PTPRN2-204ENST00000404321 PRO2289Q9P1D8 64 aa7.61□□□□□ -1.19
PTPRN2-204ENST00000404321 Q1T7F1 81 aa7.56□□□□□ -1.2
PTPRN2-204ENST00000404321 V9GYY9 64 aa7.55□□□□□ -1.2
PTPRN2-204ENST00000404321 KMT2DO14686 5537 aa7.53□□□□□ -1.2
PTPRN2-204ENST00000404321 KRTAP5-9P26371 169 aa7.51□□□□□ -1.21
PTPRN2-204ENST00000404321 PRO0628Q9UI54 55 aa7.49□□□□□ -1.21
PTPRN2-204ENST00000404321 COA5Q86WW8 74 aa7.45□□□□□ -1.22
PTPRN2-204ENST00000404321 MDN1Q9NU22 5596 aa7.44□□□□□ -1.22
PTPRN2-204ENST00000404321 BRK1Q8WUW1 75 aa7.4□□□□□ -1.22
PTPRN2-204ENST00000404321 KRTAP12-2P59991 146 aa7.37□□□□□ -1.23
PTPRN2-204ENST00000404321 SPRR2FQ96RM1 72 aa7.37□□□□□ -1.23
PTPRN2-204ENST00000404321 KRTAP13-4Q3LI77 160 aa7.36□□□□□ -1.23
PTPRN2-204ENST00000404321 KRTAP8-1Q8IUC2 63 aa7.36□□□□□ -1.23
PTPRN2-204ENST00000404321 PSPHP1O15172 72 aa7.34□□□□□ -1.23
PTPRN2-204ENST00000404321 KRTAP4-8A0A0G2JLE6 195 aa7.32□□□□□ -1.24
PTPRN2-204ENST00000404321 KRTAP10-7P60409 375 aaPredicted RBP7.32□□□□□ -1.24
PTPRN2-204ENST00000404321 KRTAP4-8Q9BYQ9 185 aa7.32□□□□□ -1.24
PTPRN2-204ENST00000404321 PRR15LQ9BU68 103 aa7.31□□□□□ -1.24
PTPRN2-204ENST00000404321 LINC01558Q9Y6Z2 57 aa7.3□□□□□ -1.24
PTPRN2-204ENST00000404321 KRTAP20-1Q3LI63 56 aa7.26□□□□□ -1.25
PTPRN2-204ENST00000404321 SPRR2EP22531 72 aa7.24□□□□□ -1.25
PTPRN2-204ENST00000404321 SPRR2BP35325 72 aa7.24□□□□□ -1.25
PTPRN2-204ENST00000404321 SPRR2AP35326 72 aa7.24□□□□□ -1.25
PTPRN2-204ENST00000404321 SEC61GP60059 68 aa7.24□□□□□ -1.25
PTPRN2-204ENST00000404321 KRTAP10-12P60413 245 aa7.22□□□□□ -1.25
PTPRN2-204ENST00000404321 CAMK2N1Q7Z7J9 78 aa7.19□□□□□ -1.26
PTPRN2-204ENST00000404321 A0A0D9SG42 100 aa7.18□□□□□ -1.26
PTPRN2-204ENST00000404321 A6NED7 52 aa7.17□□□□□ -1.26
PTPRN2-204ENST00000404321 SPATA8Q6RVD6 105 aa7.16□□□□□ -1.26
PTPRN2-204ENST00000404321 LCE1AQ5T7P2 110 aa7.14□□□□□ -1.27
PTPRN2-204ENST00000404321 CDC42SE1Q9NRR8 79 aa7.13□□□□□ -1.27
PTPRN2-204ENST00000404321 A0A1B0GU33 70 aa7.12□□□□□ -1.27
PTPRN2-204ENST00000404321 KRTAP2-3P0C7H8 128 aa7.08□□□□□ -1.28
PTPRN2-204ENST00000404321 KRTAP2-4Q9BYR9 128 aa7.08□□□□□ -1.28
PTPRN2-204ENST00000404321 SPINT4Q6UDR6 99 aa7.06□□□□□ -1.28
PTPRN2-204ENST00000404321 A0A1B0GU69 56 aa7.03□□□□□ -1.28
PTPRN2-204ENST00000404321 A8MU10 97 aa7.01□□□□□ -1.29
PTPRN2-204ENST00000404321 SPRR2DP22532 72 aa7□□□□□ -1.29
PTPRN2-204ENST00000404321 PMAIP1Q13794 54 aa7□□□□□ -1.29
PTPRN2-204ENST00000404321 KRTAP12-1P59990 96 aa6.97□□□□□ -1.29
PTPRN2-204ENST00000404321 UQCR11O14957 56 aa6.91□□□□□ -1.3
PTPRN2-204ENST00000404321 KTN1-AS1Q86SY8 53 aa6.89□□□□□ -1.31
PTPRN2-204ENST00000404321 MIR22HGQ0VDD5 57 aa6.86□□□□□ -1.31
PTPRN2-204ENST00000404321 KRTAP2-2Q9BYT5 123 aa6.85□□□□□ -1.31
PTPRN2-204ENST00000404321 KRTAP2-1Q9BYU5 128 aa6.85□□□□□ -1.31
PTPRN2-204ENST00000404321 KRTAP19-7Q3SYF9 63 aa6.82□□□□□ -1.32
PTPRN2-204ENST00000404321 LCE3BQ5TA77 95 aa6.79□□□□□ -1.32
PTPRN2-204ENST00000404321 MT1EP04732 61 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms