RNA–Protein interactions for RNA: ENST00000403915.5

KCNS3-202, Transcript of potassium voltage-gated channel modifier subfamily S member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNS3, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS3-202ENST00000403915 KRTAP9-2Q9BYQ4 174 aa4.73□□□□□ -1.65
KCNS3-202ENST00000403915 FRAS1Q86XX4 4008 aa4.73□□□□□ -1.65
KCNS3-202ENST00000403915 KRTAP4-5Q9BYR2 181 aa4.72□□□□□ -1.65
KCNS3-202ENST00000403915 DNAH7Q8WXX0 4024 aa4.71□□□□□ -1.65
KCNS3-202ENST00000403915 A0A1B0GVY2 172 aa4.71□□□□□ -1.65
KCNS3-202ENST00000403915 KRTAP12-2P59991 146 aa4.71□□□□□ -1.66
KCNS3-202ENST00000403915 KRTAP10-6P60371 365 aaPredicted RBP4.67□□□□□ -1.66
KCNS3-202ENST00000403915 KRTAP3-1Q9BYR8 98 aa4.67□□□□□ -1.66
KCNS3-202ENST00000403915 INE1O15225 51 aa4.65□□□□□ -1.67
KCNS3-202ENST00000403915 DNAH10Q8IVF4 4471 aa4.65□□□□□ -1.67
KCNS3-202ENST00000403915 PLECQ15149 4684 aaKnown RBP4.64□□□□□ -1.67
KCNS3-202ENST00000403915 DYNC1H1Q14204 4646 aaKnown RBP4.63□□□□□ -1.67
KCNS3-202ENST00000403915 STARD9Q9P2P6 4700 aa4.62□□□□□ -1.67
KCNS3-202ENST00000403915 DNAH11Q96DT5 4516 aa4.61□□□□□ -1.67
KCNS3-202ENST00000403915 KRTAP12-1P59990 96 aa4.6□□□□□ -1.67
KCNS3-202ENST00000403915 VPS13DQ5THJ4 4388 aa4.57□□□□□ -1.68
KCNS3-202ENST00000403915 HERC1Q15751 4861 aa4.56□□□□□ -1.68
KCNS3-202ENST00000403915 DNAH6Q9C0G6 4158 aa4.54□□□□□ -1.68
KCNS3-202ENST00000403915 KMT2AQ03164 3969 aa4.53□□□□□ -1.68
KCNS3-202ENST00000403915 DNAH8Q96JB1 4490 aa4.53□□□□□ -1.68
KCNS3-202ENST00000403915 DNAH17Q9UFH2 4485 aa4.51□□□□□ -1.69
KCNS3-202ENST00000403915 KRTAP1-5Q9BYS1 174 aa4.5□□□□□ -1.69
KCNS3-202ENST00000403915 FAT2Q9NYQ8 4349 aa4.47□□□□□ -1.69
KCNS3-202ENST00000403915 HSPG2P98160 4391 aa4.45□□□□□ -1.7
KCNS3-202ENST00000403915 LRP1BQ9NZR2 4599 aa4.44□□□□□ -1.7
KCNS3-202ENST00000403915 DNAH2Q9P225 4427 aa4.43□□□□□ -1.7
KCNS3-202ENST00000403915 KRTAP3-3Q9BYR6 98 aa4.43□□□□□ -1.7
KCNS3-202ENST00000403915 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
KCNS3-202ENST00000403915 CRCT1Q9UGL9 99 aa4.41□□□□□ -1.7
KCNS3-202ENST00000403915 HMCN2Q8NDA2 5059 aa4.4□□□□□ -1.7
KCNS3-202ENST00000403915 LCE2DQ5TA82 110 aaPredicted RBP4.4□□□□□ -1.71
KCNS3-202ENST00000403915 PKHD1P08F94 4074 aa4.39□□□□□ -1.71
KCNS3-202ENST00000403915 PP632Q6XCG6 107 aa4.39□□□□□ -1.71
KCNS3-202ENST00000403915 MYCBP2O75592 4640 aa4.36□□□□□ -1.71
KCNS3-202ENST00000403915 Q5VSD8 79 aa4.36□□□□□ -1.71
KCNS3-202ENST00000403915 VPS13BQ7Z7G8 4022 aa4.32□□□□□ -1.72
KCNS3-202ENST00000403915 KRTAP10-2P60368 255 aa4.32□□□□□ -1.72
KCNS3-202ENST00000403915 DNAH5Q8TE73 4624 aa4.31□□□□□ -1.72
KCNS3-202ENST00000403915 PKD1P98161 4303 aa4.31□□□□□ -1.72
KCNS3-202ENST00000403915 FAT4Q6V0I7 4981 aa4.3□□□□□ -1.72
KCNS3-202ENST00000403915 M0QZ58 72 aa4.3□□□□□ -1.72
KCNS3-202ENST00000403915 KRTAP13-2Q52LG2 175 aa4.29□□□□□ -1.72
KCNS3-202ENST00000403915 KRTAP9-7A8MTY7 169 aa4.29□□□□□ -1.72
KCNS3-202ENST00000403915 RNF213Q63HN8 5207 aa4.26□□□□□ -1.73
KCNS3-202ENST00000403915 KRTAP10-1P60331 282 aa4.25□□□□□ -1.73
KCNS3-202ENST00000403915 PKHD1L1Q86WI1 4243 aa4.24□□□□□ -1.73
KCNS3-202ENST00000403915 APOBP04114 4563 aaKnown RBP4.23□□□□□ -1.73
KCNS3-202ENST00000403915 LCE2AQ5TA79 106 aaPredicted RBP4.22□□□□□ -1.73
KCNS3-202ENST00000403915 MUC2Q02817 5179 aa4.19□□□□□ -1.74
KCNS3-202ENST00000403915 C9orf92A6NGG3 77 aa4.18□□□□□ -1.74
KCNS3-202ENST00000403915 SMR3BP02814 79 aaPredicted RBP4.14□□□□□ -1.75
KCNS3-202ENST00000403915 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.12□□□□□ -1.75
KCNS3-202ENST00000403915 FAT1Q14517 4588 aa4.12□□□□□ -1.75
KCNS3-202ENST00000403915 FAT3Q8TDW7 4589 aa4.09□□□□□ -1.75
KCNS3-202ENST00000403915 KRTAP10-4P60372 401 aaPredicted RBP4.06□□□□□ -1.76
KCNS3-202ENST00000403915 KRTAP1-4P0C5Y4 121 aa4.05□□□□□ -1.76
KCNS3-202ENST00000403915 LORP23490 312 aaPredicted RBP4.04□□□□□ -1.76
KCNS3-202ENST00000403915 RPS29P62273 56 aaKnown RBP4.01□□□□□ -1.77
KCNS3-202ENST00000403915 MT1HL1P0DM35 61 aa4□□□□□ -1.77
KCNS3-202ENST00000403915 LRP1Q07954 4544 aaKnown RBP3.97□□□□□ -1.77
KCNS3-202ENST00000403915 TNXBP22105 4242 aa3.95□□□□□ -1.78
KCNS3-202ENST00000403915 LRP2P98164 4655 aa3.91□□□□□ -1.78
KCNS3-202ENST00000403915 SSPOA2VEC9 5147 aa3.9□□□□□ -1.79
KCNS3-202ENST00000403915 TNP1P09430 55 aa3.89□□□□□ -1.79
KCNS3-202ENST00000403915 KRTAP10-10P60014 251 aa3.87□□□□□ -1.79
KCNS3-202ENST00000403915 KRTAP20-1Q3LI63 56 aa3.77□□□□□ -1.81
KCNS3-202ENST00000403915 KRTAP6-3Q3LI67 103 aa3.77□□□□□ -1.81
KCNS3-202ENST00000403915 LPAP08519 4548 aa3.69□□□□□ -1.82
KCNS3-202ENST00000403915 LCE2CQ5TA81 110 aa3.67□□□□□ -1.82
KCNS3-202ENST00000403915 MUC17Q685J3 4493 aa3.64□□□□□ -1.83
KCNS3-202ENST00000403915 FSIP2Q5CZC0 6907 aa3.63□□□□□ -1.83
KCNS3-202ENST00000403915 KRTAP2-2Q9BYT5 123 aa3.59□□□□□ -1.83
KCNS3-202ENST00000403915 NEBP20929 6669 aa3.58□□□□□ -1.84
KCNS3-202ENST00000403915 LCE3AQ5TA76 89 aa3.56□□□□□ -1.84
KCNS3-202ENST00000403915 KRTAP10-12P60413 245 aa3.55□□□□□ -1.84
KCNS3-202ENST00000403915 KRTAP2-3P0C7H8 128 aa3.54□□□□□ -1.84
KCNS3-202ENST00000403915 KRTAP2-4Q9BYR9 128 aa3.54□□□□□ -1.84
KCNS3-202ENST00000403915 LCE2BO14633 110 aa3.54□□□□□ -1.84
KCNS3-202ENST00000403915 USH2AO75445 5202 aa3.51□□□□□ -1.85
KCNS3-202ENST00000403915 FLGP20930 4061 aaPredicted RBP3.51□□□□□ -1.85
KCNS3-202ENST00000403915 GPR98Q8WXG9 6306 aa3.5□□□□□ -1.85
KCNS3-202ENST00000403915 KRTAP4-1Q9BYQ7 146 aa3.49□□□□□ -1.85
KCNS3-202ENST00000403915 KRTAP19-1Q8IUB9 90 aa3.47□□□□□ -1.85
KCNS3-202ENST00000403915 MT1HP80294 61 aa3.46□□□□□ -1.86
KCNS3-202ENST00000403915 KRTAP8-1Q8IUC2 63 aa3.45□□□□□ -1.86
KCNS3-202ENST00000403915 FCGBPQ9Y6R7 5405 aaPredicted RBP3.43□□□□□ -1.86
KCNS3-202ENST00000403915 SYNE2Q8WXH0 6885 aaKnown RBP3.41□□□□□ -1.86
KCNS3-202ENST00000403915 LCE1AQ5T7P2 110 aa3.4□□□□□ -1.86
KCNS3-202ENST00000403915 KRTAP19-6Q3LI70 58 aa3.39□□□□□ -1.87
KCNS3-202ENST00000403915 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
KCNS3-202ENST00000403915 KRTAP19-2Q3LHN2 52 aa3.36□□□□□ -1.87
KCNS3-202ENST00000403915 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.87
KCNS3-202ENST00000403915 KRTAP12-3P60328 96 aa3.34□□□□□ -1.87
KCNS3-202ENST00000403915 KRTAP10-5P60370 271 aa3.32□□□□□ -1.88
KCNS3-202ENST00000403915 M0R2T5 61 aa3.31□□□□□ -1.88
KCNS3-202ENST00000403915 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
KCNS3-202ENST00000403915 KRTAP5-9P26371 169 aa3.25□□□□□ -1.89
KCNS3-202ENST00000403915 KRTAP12-4P60329 112 aa3.21□□□□□ -1.9
KCNS3-202ENST00000403915 KRTAP10-7P60409 375 aaPredicted RBP3.2□□□□□ -1.9
KCNS3-202ENST00000403915 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms