RNA–Protein interactions for RNA: ENST00000402876.3

PARVB-202, Transcript of parvin beta, humanhuman

TSL 1 (best)

Gene PARVB, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-202ENST00000402876 LCA10Q71F78 164 aa9.56□□□□□ -0.88
PARVB-202ENST00000402876 LCE2CQ5TA81 110 aa9.55□□□□□ -0.88
PARVB-202ENST00000402876 SPTSSBQ8NFR3 76 aa9.55□□□□□ -0.88
PARVB-202ENST00000402876 RPS28P62857 69 aaKnown RBP9.52□□□□□ -0.89
PARVB-202ENST00000402876 KRTAP9-2Q9BYQ4 174 aa9.5□□□□□ -0.89
PARVB-202ENST00000402876 FAT4Q6V0I7 4981 aa9.5□□□□□ -0.89
PARVB-202ENST00000402876 KRTAP3-3Q9BYR6 98 aa9.48□□□□□ -0.89
PARVB-202ENST00000402876 CSAG1Q6PB30 78 aa9.44□□□□□ -0.9
PARVB-202ENST00000402876 MT1HP80294 61 aa9.4□□□□□ -0.9
PARVB-202ENST00000402876 LCE2AQ5TA79 106 aaPredicted RBP9.4□□□□□ -0.9
PARVB-202ENST00000402876 SMIM26A0A096LP01 95 aa9.37□□□□□ -0.91
PARVB-202ENST00000402876 M0R2T5 61 aa9.34□□□□□ -0.91
PARVB-202ENST00000402876 FLGP20930 4061 aaPredicted RBP9.33□□□□□ -0.92
PARVB-202ENST00000402876 KRTAP9-6A0A140TA67 174 aa9.31□□□□□ -0.92
PARVB-202ENST00000402876 V9GYY9 64 aa9.27□□□□□ -0.93
PARVB-202ENST00000402876 LINC01558Q9Y6Z2 57 aa9.24□□□□□ -0.93
PARVB-202ENST00000402876 Q1T7F1 81 aa9.23□□□□□ -0.93
PARVB-202ENST00000402876 SEC61GP60059 68 aa9.22□□□□□ -0.93
PARVB-202ENST00000402876 H0YAA0 97 aa9.21□□□□□ -0.94
PARVB-202ENST00000402876 A0A1B0GU69 56 aa9.18□□□□□ -0.94
PARVB-202ENST00000402876 PRR15LQ9BU68 103 aa9.17□□□□□ -0.94
PARVB-202ENST00000402876 ADM2Q7Z4H4 148 aa9.15□□□□□ -0.94
PARVB-202ENST00000402876 KRTAP10-6P60371 365 aaPredicted RBP9.1□□□□□ -0.95
PARVB-202ENST00000402876 KRTAP3-2Q9BYR7 98 aa9.09□□□□□ -0.95
PARVB-202ENST00000402876 PSPHP1O15172 72 aa9.05□□□□□ -0.96
PARVB-202ENST00000402876 P0C880 135 aa9.04□□□□□ -0.96
PARVB-202ENST00000402876 LORP23490 312 aaPredicted RBP9.03□□□□□ -0.96
PARVB-202ENST00000402876 FSIP2Q5CZC0 6907 aa9□□□□□ -0.97
PARVB-202ENST00000402876 LCE2DQ5TA82 110 aaPredicted RBP9□□□□□ -0.97
PARVB-202ENST00000402876 KRTAP9-8Q9BYQ0 159 aa9□□□□□ -0.97
PARVB-202ENST00000402876 MT2AP02795 61 aa8.98□□□□□ -0.97
PARVB-202ENST00000402876 Q5VV11 94 aa8.97□□□□□ -0.97
PARVB-202ENST00000402876 A0A1B0GU33 70 aa8.95□□□□□ -0.98
PARVB-202ENST00000402876 KRTAP10-10P60014 251 aa8.93□□□□□ -0.98
PARVB-202ENST00000402876 MT1FP04733 61 aa8.91□□□□□ -0.98
PARVB-202ENST00000402876 CRIPTQ9P021 101 aa8.91□□□□□ -0.98
PARVB-202ENST00000402876 CRCT1Q9UGL9 99 aa8.9□□□□□ -0.98
PARVB-202ENST00000402876 UQCR11O14957 56 aa8.87□□□□□ -0.99
PARVB-202ENST00000402876 R4GN34 69 aa8.87□□□□□ -0.99
PARVB-202ENST00000402876 M0QZ58 72 aa8.86□□□□□ -0.99
PARVB-202ENST00000402876 A6NED7 52 aa8.82□□□□□ -1
PARVB-202ENST00000402876 KRTAP13-4Q3LI77 160 aa8.77□□□□□ -1.01
PARVB-202ENST00000402876 SPATA8Q6RVD6 105 aa8.77□□□□□ -1.01
PARVB-202ENST00000402876 MIR22HGQ0VDD5 57 aa8.74□□□□□ -1.01
PARVB-202ENST00000402876 SPRR2GQ9BYE4 73 aa8.72□□□□□ -1.01
PARVB-202ENST00000402876 KRTAP9-3Q9BYQ3 159 aa8.7□□□□□ -1.02
PARVB-202ENST00000402876 KRTAP19-1Q8IUB9 90 aa8.68□□□□□ -1.02
PARVB-202ENST00000402876 LINC01554Q52M75 96 aa8.66□□□□□ -1.02
PARVB-202ENST00000402876 A0A0D9SG42 100 aa8.63□□□□□ -1.03
PARVB-202ENST00000402876 CDC42SE1Q9NRR8 79 aa8.62□□□□□ -1.03
PARVB-202ENST00000402876 A8MU10 97 aa8.61□□□□□ -1.03
PARVB-202ENST00000402876 A6NN06 94 aa8.55□□□□□ -1.04
PARVB-202ENST00000402876 BRK1Q8WUW1 75 aa8.55□□□□□ -1.04
PARVB-202ENST00000402876 KRTAP19-8Q3LI54 63 aa8.53□□□□□ -1.04
PARVB-202ENST00000402876 LCE2BO14633 110 aa8.47□□□□□ -1.05
PARVB-202ENST00000402876 KRTAP12-1P59990 96 aa8.47□□□□□ -1.05
PARVB-202ENST00000402876 SPINT4Q6UDR6 99 aa8.46□□□□□ -1.06
PARVB-202ENST00000402876 K7ERS5 55 aa8.44□□□□□ -1.06
PARVB-202ENST00000402876 PLAC4Q8WY50 150 aa8.43□□□□□ -1.06
PARVB-202ENST00000402876 KRTAP12-2P59991 146 aa8.41□□□□□ -1.06
PARVB-202ENST00000402876 MT1BP07438 61 aa8.4□□□□□ -1.06
PARVB-202ENST00000402876 KRTAP9-7A8MTY7 169 aa8.33□□□□□ -1.08
PARVB-202ENST00000402876 SSPOA2VEC9 5147 aa8.32□□□□□ -1.08
PARVB-202ENST00000402876 USH2AO75445 5202 aa8.31□□□□□ -1.08
PARVB-202ENST00000402876 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.31□□□□□ -1.08
PARVB-202ENST00000402876 CAMK2N1Q7Z7J9 78 aa8.29□□□□□ -1.08
PARVB-202ENST00000402876 PRO0628Q9UI54 55 aa8.26□□□□□ -1.09
PARVB-202ENST00000402876 FCGBPQ9Y6R7 5405 aaPredicted RBP8.18□□□□□ -1.1
PARVB-202ENST00000402876 PRO2289Q9P1D8 64 aa8.1□□□□□ -1.11
PARVB-202ENST00000402876 MT1XP80297 61 aa8.08□□□□□ -1.12
PARVB-202ENST00000402876 PMAIP1Q13794 54 aa8.08□□□□□ -1.12
PARVB-202ENST00000402876 KRTAP10-5P60370 271 aa8.06□□□□□ -1.12
PARVB-202ENST00000402876 KRTAP19-6Q3LI70 58 aa8.05□□□□□ -1.12
PARVB-202ENST00000402876 SYNE2Q8WXH0 6885 aaKnown RBP8.01□□□□□ -1.13
PARVB-202ENST00000402876 ROMO1P60602 79 aa8.01□□□□□ -1.13
PARVB-202ENST00000402876 C10orf95Q9H7T3 257 aa8.01□□□□□ -1.13
PARVB-202ENST00000402876 MACF1Q9UPN3 7388 aaKnown RBP7.98□□□□□ -1.13
PARVB-202ENST00000402876 TNP1P09430 55 aa7.86□□□□□ -1.15
PARVB-202ENST00000402876 KRTAP25-1Q3LHN0 102 aa7.83□□□□□ -1.16
PARVB-202ENST00000402876 KRTAP10-7P60409 375 aaPredicted RBP7.73□□□□□ -1.17
PARVB-202ENST00000402876 KTN1-AS1Q86SY8 53 aa7.69□□□□□ -1.18
PARVB-202ENST00000402876 KRTAP10-12P60413 245 aa7.68□□□□□ -1.18
PARVB-202ENST00000402876 KRTAP6-3Q3LI67 103 aa7.65□□□□□ -1.18
PARVB-202ENST00000402876 NEBP20929 6669 aa7.59□□□□□ -1.19
PARVB-202ENST00000402876 KRTAP23-1A1A580 65 aa7.56□□□□□ -1.2
PARVB-202ENST00000402876 PRAC1Q96KF2 57 aa7.55□□□□□ -1.2
PARVB-202ENST00000402876 PP632Q6XCG6 107 aa7.53□□□□□ -1.2
PARVB-202ENST00000402876 LCE3AQ5TA76 89 aa7.52□□□□□ -1.21
PARVB-202ENST00000402876 MUC12Q9UKN1 5478 aa7.47□□□□□ -1.21
PARVB-202ENST00000402876 KRTAP4-8A0A0G2JLE6 195 aa7.45□□□□□ -1.22
PARVB-202ENST00000402876 KRTAP4-8Q9BYQ9 185 aa7.45□□□□□ -1.22
PARVB-202ENST00000402876 KRTAP8-1Q8IUC2 63 aa7.37□□□□□ -1.23
PARVB-202ENST00000402876 KRTAP20-1Q3LI63 56 aa7.27□□□□□ -1.25
PARVB-202ENST00000402876 SVIPQ8NHG7 77 aa7.27□□□□□ -1.25
PARVB-202ENST00000402876 KRTAP19-5Q3LI72 72 aa7.25□□□□□ -1.25
PARVB-202ENST00000402876 KRTAP12-3P60328 96 aa7.24□□□□□ -1.25
PARVB-202ENST00000402876 MDN1Q9NU22 5596 aa7.23□□□□□ -1.25
PARVB-202ENST00000402876 KMT2DO14686 5537 aa7.2□□□□□ -1.26
PARVB-202ENST00000402876 KRTAP19-7Q3SYF9 63 aa7.2□□□□□ -1.26
PARVB-202ENST00000402876 KRTAP5-9P26371 169 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms