RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 UQCR11O14957 56 aa8.62□□□□□ -1.03
CHRFAM7A-203ENST00000401522 C20orf166-AS1Q96NR2 134 aa8.62□□□□□ -1.03
CHRFAM7A-203ENST00000401522 HERC1Q15751 4861 aa8.62□□□□□ -1.03
CHRFAM7A-203ENST00000401522 MIR22HGQ0VDD5 57 aa8.58□□□□□ -1.04
CHRFAM7A-203ENST00000401522 C9orf92A6NGG3 77 aa8.56□□□□□ -1.04
CHRFAM7A-203ENST00000401522 RBM12B-AS1Q9P1G2 102 aa8.51□□□□□ -1.05
CHRFAM7A-203ENST00000401522 TPRXLQ17RH7 258 aa8.49□□□□□ -1.05
CHRFAM7A-203ENST00000401522 HMCN2Q8NDA2 5059 aa8.45□□□□□ -1.06
CHRFAM7A-203ENST00000401522 KRTAP3-1Q9BYR8 98 aa8.43□□□□□ -1.06
CHRFAM7A-203ENST00000401522 LPAP08519 4548 aa8.39□□□□□ -1.07
CHRFAM7A-203ENST00000401522 XP32Q5T750 250 aa8.36□□□□□ -1.07
CHRFAM7A-203ENST00000401522 COX6B2Q6YFQ2 88 aa8.35□□□□□ -1.07
CHRFAM7A-203ENST00000401522 PRAC1Q96KF2 57 aa8.33□□□□□ -1.08
CHRFAM7A-203ENST00000401522 LRP2P98164 4655 aa8.31□□□□□ -1.08
CHRFAM7A-203ENST00000401522 A0A1B0GU33 70 aa8.3□□□□□ -1.08
CHRFAM7A-203ENST00000401522 H0YAA0 97 aa8.29□□□□□ -1.08
CHRFAM7A-203ENST00000401522 ADM2Q7Z4H4 148 aa8.29□□□□□ -1.08
CHRFAM7A-203ENST00000401522 H1FX-AS1Q4G0G2 97 aa8.28□□□□□ -1.08
CHRFAM7A-203ENST00000401522 RPL37P61927 97 aaKnown RBP8.26□□□□□ -1.09
CHRFAM7A-203ENST00000401522 SEC61BP60468 96 aaKnown RBP8.2□□□□□ -1.1
CHRFAM7A-203ENST00000401522 UBR4Q5T4S7 5183 aa8.15□□□□□ -1.1
CHRFAM7A-203ENST00000401522 CSAG1Q6PB30 78 aa8.11□□□□□ -1.11
CHRFAM7A-203ENST00000401522 LINC01554Q52M75 96 aa8.1□□□□□ -1.11
CHRFAM7A-203ENST00000401522 MUC17Q685J3 4493 aa8.1□□□□□ -1.11
CHRFAM7A-203ENST00000401522 KRTAP3-3Q9BYR6 98 aa8.09□□□□□ -1.11
CHRFAM7A-203ENST00000401522 K7ERS5 55 aa8.07□□□□□ -1.12
CHRFAM7A-203ENST00000401522 S4R3F8 94 aa8.05□□□□□ -1.12
CHRFAM7A-203ENST00000401522 KRTAP4-1Q9BYQ7 146 aa8.03□□□□□ -1.12
CHRFAM7A-203ENST00000401522 KRTAP10-6P60371 365 aaPredicted RBP8.02□□□□□ -1.13
CHRFAM7A-203ENST00000401522 MUC2Q02817 5179 aa8□□□□□ -1.13
CHRFAM7A-203ENST00000401522 KRTAP3-2Q9BYR7 98 aa7.97□□□□□ -1.13
CHRFAM7A-203ENST00000401522 RNF213Q63HN8 5207 aa7.97□□□□□ -1.13
CHRFAM7A-203ENST00000401522 KRTAP25-1Q3LHN0 102 aa7.94□□□□□ -1.14
CHRFAM7A-203ENST00000401522 KRTAP13-4Q3LI77 160 aa7.9□□□□□ -1.14
CHRFAM7A-203ENST00000401522 ROMO1P60602 79 aa7.86□□□□□ -1.15
CHRFAM7A-203ENST00000401522 P0C880 135 aa7.84□□□□□ -1.15
CHRFAM7A-203ENST00000401522 A0A0D9SG42 100 aa7.84□□□□□ -1.16
CHRFAM7A-203ENST00000401522 KRTAP19-2Q3LHN2 52 aa7.8□□□□□ -1.16
CHRFAM7A-203ENST00000401522 LCE2CQ5TA81 110 aa7.74□□□□□ -1.17
CHRFAM7A-203ENST00000401522 CRIPTQ9P021 101 aa7.72□□□□□ -1.17
CHRFAM7A-203ENST00000401522 M0QZ58 72 aa7.68□□□□□ -1.18
CHRFAM7A-203ENST00000401522 FAT4Q6V0I7 4981 aa7.67□□□□□ -1.18
CHRFAM7A-203ENST00000401522 KRTAP12-2P59991 146 aa7.66□□□□□ -1.18
CHRFAM7A-203ENST00000401522 KRTAP12-1P59990 96 aa7.64□□□□□ -1.19
CHRFAM7A-203ENST00000401522 MT1HP80294 61 aa7.59□□□□□ -1.19
CHRFAM7A-203ENST00000401522 SPINT4Q6UDR6 99 aa7.59□□□□□ -1.19
CHRFAM7A-203ENST00000401522 FLGP20930 4061 aaPredicted RBP7.57□□□□□ -1.2
CHRFAM7A-203ENST00000401522 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
CHRFAM7A-203ENST00000401522 C10orf95Q9H7T3 257 aa7.48□□□□□ -1.21
CHRFAM7A-203ENST00000401522 M0R2T5 61 aa7.47□□□□□ -1.21
CHRFAM7A-203ENST00000401522 R4GN34 69 aa7.44□□□□□ -1.22
CHRFAM7A-203ENST00000401522 H3BS24 57 aa7.36□□□□□ -1.23
CHRFAM7A-203ENST00000401522 LORP23490 312 aaPredicted RBP7.35□□□□□ -1.23
CHRFAM7A-203ENST00000401522 KRTAP9-8Q9BYQ0 159 aa7.27□□□□□ -1.25
CHRFAM7A-203ENST00000401522 KRTAP15-1Q3LI76 137 aa7.22□□□□□ -1.25
CHRFAM7A-203ENST00000401522 MT2AP02795 61 aa7.21□□□□□ -1.26
CHRFAM7A-203ENST00000401522 MT1FP04733 61 aa7.15□□□□□ -1.26
CHRFAM7A-203ENST00000401522 KRTAP10-10P60014 251 aa7.13□□□□□ -1.27
CHRFAM7A-203ENST00000401522 CAMK2N1Q7Z7J9 78 aa7.07□□□□□ -1.28
CHRFAM7A-203ENST00000401522 KRTAP9-3Q9BYQ3 159 aa7.03□□□□□ -1.28
CHRFAM7A-203ENST00000401522 PP632Q6XCG6 107 aa7.01□□□□□ -1.29
CHRFAM7A-203ENST00000401522 NDUFAF8A1L188 74 aa6.99□□□□□ -1.29
CHRFAM7A-203ENST00000401522 LCE2DQ5TA82 110 aaPredicted RBP6.99□□□□□ -1.29
CHRFAM7A-203ENST00000401522 PLAC4Q8WY50 150 aa6.93□□□□□ -1.3
CHRFAM7A-203ENST00000401522 KRTAP19-1Q8IUB9 90 aa6.92□□□□□ -1.3
CHRFAM7A-203ENST00000401522 SPRR2GQ9BYE4 73 aa6.92□□□□□ -1.3
CHRFAM7A-203ENST00000401522 LCE2BO14633 110 aa6.88□□□□□ -1.31
CHRFAM7A-203ENST00000401522 KRTAP9-2Q9BYQ4 174 aa6.87□□□□□ -1.31
CHRFAM7A-203ENST00000401522 TNP1P09430 55 aa6.83□□□□□ -1.32
CHRFAM7A-203ENST00000401522 KRTAP23-1A1A580 65 aa6.82□□□□□ -1.32
CHRFAM7A-203ENST00000401522 A0A0A0MQY5 61 aa6.81□□□□□ -1.32
CHRFAM7A-203ENST00000401522 KRTAP19-8Q3LI54 63 aa6.78□□□□□ -1.32
CHRFAM7A-203ENST00000401522 USH2AO75445 5202 aa6.74□□□□□ -1.33
CHRFAM7A-203ENST00000401522 FSIP2Q5CZC0 6907 aa6.72□□□□□ -1.33
CHRFAM7A-203ENST00000401522 MT1BP07438 61 aa6.7□□□□□ -1.34
CHRFAM7A-203ENST00000401522 LUZP6Q538Z0 58 aa6.63□□□□□ -1.35
CHRFAM7A-203ENST00000401522 SSPOA2VEC9 5147 aa6.58□□□□□ -1.36
CHRFAM7A-203ENST00000401522 CRCT1Q9UGL9 99 aa6.58□□□□□ -1.36
CHRFAM7A-203ENST00000401522 KRTAP19-6Q3LI70 58 aa6.55□□□□□ -1.36
CHRFAM7A-203ENST00000401522 SPRR5A0A1B0GTR4 108 aa6.5□□□□□ -1.37
CHRFAM7A-203ENST00000401522 KRTAP9-6A0A140TA67 174 aa6.46□□□□□ -1.38
CHRFAM7A-203ENST00000401522 KRTAP10-5P60370 271 aa6.44□□□□□ -1.38
CHRFAM7A-203ENST00000401522 LCE3AQ5TA76 89 aa6.42□□□□□ -1.38
CHRFAM7A-203ENST00000401522 MT1XP80297 61 aa6.41□□□□□ -1.38
CHRFAM7A-203ENST00000401522 PRO2289Q9P1D8 64 aa6.4□□□□□ -1.39
CHRFAM7A-203ENST00000401522 FCGBPQ9Y6R7 5405 aaPredicted RBP6.36□□□□□ -1.39
CHRFAM7A-203ENST00000401522 KRTAP8-1Q8IUC2 63 aa6.32□□□□□ -1.4
CHRFAM7A-203ENST00000401522 KRTAP10-12P60413 245 aa6.21□□□□□ -1.41
CHRFAM7A-203ENST00000401522 KRTAP12-3P60328 96 aa6.15□□□□□ -1.43
CHRFAM7A-203ENST00000401522 KRTAP10-7P60409 375 aaPredicted RBP6.13□□□□□ -1.43
CHRFAM7A-203ENST00000401522 MACF1Q9UPN3 7388 aaKnown RBP6.12□□□□□ -1.43
CHRFAM7A-203ENST00000401522 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.1□□□□□ -1.43
CHRFAM7A-203ENST00000401522 SYNE2Q8WXH0 6885 aaKnown RBP6□□□□□ -1.45
CHRFAM7A-203ENST00000401522 KRTAP4-8A0A0G2JLE6 195 aa5.97□□□□□ -1.45
CHRFAM7A-203ENST00000401522 KRTAP4-8Q9BYQ9 185 aa5.97□□□□□ -1.45
CHRFAM7A-203ENST00000401522 KMT2DO14686 5537 aa5.97□□□□□ -1.45
CHRFAM7A-203ENST00000401522 KRTAP6-3Q3LI67 103 aa5.87□□□□□ -1.47
CHRFAM7A-203ENST00000401522 KRTAP19-5Q3LI72 72 aa5.87□□□□□ -1.47
CHRFAM7A-203ENST00000401522 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
CHRFAM7A-203ENST00000401522 KRTAP5-9P26371 169 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms