RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 CSAG1Q6PB30 78 aa8.38□□□□□ -1.07
CTNS-203ENST00000399306 KRTAP10-10P60014 251 aa8.36□□□□□ -1.07
CTNS-203ENST00000399306 SERP2Q8N6R1 65 aa8.34□□□□□ -1.07
CTNS-203ENST00000399306 DMAC1Q96GE9 116 aa8.3□□□□□ -1.08
CTNS-203ENST00000399306 KRTAP9-3Q9BYQ3 159 aa8.28□□□□□ -1.08
CTNS-203ENST00000399306 NDUFC1O43677 76 aa8.27□□□□□ -1.09
CTNS-203ENST00000399306 C20orf197Q8N268 126 aa8.22□□□□□ -1.09
CTNS-203ENST00000399306 SNURFQ9Y675 71 aa8.2□□□□□ -1.1
CTNS-203ENST00000399306 H0YAA0 97 aa8.18□□□□□ -1.1
CTNS-203ENST00000399306 COX7CP15954 63 aa8.18□□□□□ -1.1
CTNS-203ENST00000399306 SPANXA2-OT1Q8N9U9 137 aa8.18□□□□□ -1.1
CTNS-203ENST00000399306 FSIP2Q5CZC0 6907 aa8.18□□□□□ -1.1
CTNS-203ENST00000399306 ACYP2P14621 99 aa8.17□□□□□ -1.1
CTNS-203ENST00000399306 USH2AO75445 5202 aa8.16□□□□□ -1.1
CTNS-203ENST00000399306 KRTAP9-6A0A140TA67 174 aa8.14□□□□□ -1.11
CTNS-203ENST00000399306 CRCT1Q9UGL9 99 aa8.14□□□□□ -1.11
CTNS-203ENST00000399306 KRTAP4-8Q9BYQ9 185 aa8.11□□□□□ -1.11
CTNS-203ENST00000399306 CRIPTQ9P021 101 aa8.07□□□□□ -1.12
CTNS-203ENST00000399306 SPTSSBQ8NFR3 76 aa8.04□□□□□ -1.12
CTNS-203ENST00000399306 ANAPC13Q9BS18 74 aa8.04□□□□□ -1.12
CTNS-203ENST00000399306 KRTAP19-1Q8IUB9 90 aa8.02□□□□□ -1.13
CTNS-203ENST00000399306 SPRR2GQ9BYE4 73 aa8.02□□□□□ -1.13
CTNS-203ENST00000399306 SSPOA2VEC9 5147 aa8□□□□□ -1.13
CTNS-203ENST00000399306 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.98□□□□□ -1.13
CTNS-203ENST00000399306 CHKB-CPT1BH3BT56 60 aa7.97□□□□□ -1.13
CTNS-203ENST00000399306 H7BZZ5 65 aa7.97□□□□□ -1.13
CTNS-203ENST00000399306 ADM2Q7Z4H4 148 aa7.97□□□□□ -1.13
CTNS-203ENST00000399306 KRTAP19-8Q3LI54 63 aa7.91□□□□□ -1.14
CTNS-203ENST00000399306 CYSTM1Q9H1C7 97 aa7.9□□□□□ -1.14
CTNS-203ENST00000399306 KRTAP19-6Q3LI70 58 aa7.86□□□□□ -1.15
CTNS-203ENST00000399306 Q5VV11 94 aa7.85□□□□□ -1.15
CTNS-203ENST00000399306 COA5Q86WW8 74 aa7.85□□□□□ -1.15
CTNS-203ENST00000399306 CCDC179H3BU77 68 aa7.83□□□□□ -1.16
CTNS-203ENST00000399306 P0C880 135 aa7.83□□□□□ -1.16
CTNS-203ENST00000399306 MT1BP07438 61 aa7.8□□□□□ -1.16
CTNS-203ENST00000399306 FCGBPQ9Y6R7 5405 aaPredicted RBP7.79□□□□□ -1.16
CTNS-203ENST00000399306 R4GN34 69 aa7.78□□□□□ -1.16
CTNS-203ENST00000399306 ATP5EP56381 51 aaPredicted RBP7.77□□□□□ -1.17
CTNS-203ENST00000399306 KRTAP4-12Q9BQ66 201 aa7.72□□□□□ -1.17
CTNS-203ENST00000399306 M0QZ58 72 aa7.7□□□□□ -1.18
CTNS-203ENST00000399306 LCE3BQ5TA77 95 aa7.69□□□□□ -1.18
CTNS-203ENST00000399306 TMEM258P61165 79 aa7.65□□□□□ -1.18
CTNS-203ENST00000399306 SEC61GP60059 68 aa7.63□□□□□ -1.19
CTNS-203ENST00000399306 SERP1Q9Y6X1 66 aa7.6□□□□□ -1.19
CTNS-203ENST00000399306 A6NN06 94 aa7.59□□□□□ -1.19
CTNS-203ENST00000399306 KRTAP10-5P60370 271 aa7.59□□□□□ -1.19
CTNS-203ENST00000399306 PLAC4Q8WY50 150 aa7.58□□□□□ -1.2
CTNS-203ENST00000399306 KRTAP9-9Q9BYP9 154 aa7.58□□□□□ -1.2
CTNS-203ENST00000399306 KRTAP9-4Q9BYQ2 154 aa7.58□□□□□ -1.2
CTNS-203ENST00000399306 LINC01554Q52M75 96 aa7.51□□□□□ -1.21
CTNS-203ENST00000399306 MACF1Q9UPN3 7388 aaKnown RBP7.51□□□□□ -1.21
CTNS-203ENST00000399306 PRO2289Q9P1D8 64 aa7.48□□□□□ -1.21
CTNS-203ENST00000399306 KRTAP4-8A0A0G2JLE6 195 aa7.46□□□□□ -1.22
CTNS-203ENST00000399306 A0A1B0GU69 56 aa7.45□□□□□ -1.22
CTNS-203ENST00000399306 A0A1B0GU33 70 aa7.44□□□□□ -1.22
CTNS-203ENST00000399306 KRTAP13-4Q3LI77 160 aa7.44□□□□□ -1.22
CTNS-203ENST00000399306 MT1XP80297 61 aa7.4□□□□□ -1.22
CTNS-203ENST00000399306 PRR15LQ9BU68 103 aa7.38□□□□□ -1.23
CTNS-203ENST00000399306 LINC01558Q9Y6Z2 57 aa7.38□□□□□ -1.23
CTNS-203ENST00000399306 KRTAP9-7A8MTY7 169 aa7.36□□□□□ -1.23
CTNS-203ENST00000399306 SYNE2Q8WXH0 6885 aaKnown RBP7.32□□□□□ -1.24
CTNS-203ENST00000399306 SPATA8Q6RVD6 105 aa7.29□□□□□ -1.24
CTNS-203ENST00000399306 PCP4P48539 62 aa7.28□□□□□ -1.24
CTNS-203ENST00000399306 SMIM26A0A096LP01 95 aa7.27□□□□□ -1.25
CTNS-203ENST00000399306 KRTAP12-2P59991 146 aa7.24□□□□□ -1.25
CTNS-203ENST00000399306 KRTAP6-3Q3LI67 103 aa7.24□□□□□ -1.25
CTNS-203ENST00000399306 A0A0D9SG42 100 aa7.22□□□□□ -1.25
CTNS-203ENST00000399306 V9GYY9 64 aa7.21□□□□□ -1.26
CTNS-203ENST00000399306 LCE1DQ5T752 114 aa7.2□□□□□ -1.26
CTNS-203ENST00000399306 KRTAP4-7Q9BYR0 210 aa7.2□□□□□ -1.26
CTNS-203ENST00000399306 CAMK2N1Q7Z7J9 78 aa7.19□□□□□ -1.26
CTNS-203ENST00000399306 KRTAP12-1P59990 96 aa7.16□□□□□ -1.26
CTNS-203ENST00000399306 Q1T7F1 81 aa7.15□□□□□ -1.26
CTNS-203ENST00000399306 UQCR11O14957 56 aa7.14□□□□□ -1.27
CTNS-203ENST00000399306 RPS28P62857 69 aaKnown RBP7.13□□□□□ -1.27
CTNS-203ENST00000399306 SPINT4Q6UDR6 99 aa7.13□□□□□ -1.27
CTNS-203ENST00000399306 A8MU10 97 aa7.08□□□□□ -1.28
CTNS-203ENST00000399306 KRTAP10-12P60413 245 aa7.08□□□□□ -1.28
CTNS-203ENST00000399306 KRTAP5-9P26371 169 aa7.07□□□□□ -1.28
CTNS-203ENST00000399306 KMT2DO14686 5537 aa7.05□□□□□ -1.28
CTNS-203ENST00000399306 KRTAP10-7P60409 375 aaPredicted RBP7.03□□□□□ -1.28
CTNS-203ENST00000399306 KRTAP4-9Q9BYQ8 210 aa7.02□□□□□ -1.29
CTNS-203ENST00000399306 PSPHP1O15172 72 aa6.97□□□□□ -1.29
CTNS-203ENST00000399306 MIR22HGQ0VDD5 57 aa6.97□□□□□ -1.29
CTNS-203ENST00000399306 KRTAP8-1Q8IUC2 63 aa6.97□□□□□ -1.29
CTNS-203ENST00000399306 MUC12Q9UKN1 5478 aa6.96□□□□□ -1.3
CTNS-203ENST00000399306 KRTAP4-2Q9BYR5 136 aa6.92□□□□□ -1.3
CTNS-203ENST00000399306 NEBP20929 6669 aa6.89□□□□□ -1.31
CTNS-203ENST00000399306 LCE4AQ5TA78 99 aa6.87□□□□□ -1.31
CTNS-203ENST00000399306 SPRR2FQ96RM1 72 aa6.85□□□□□ -1.31
CTNS-203ENST00000399306 MDN1Q9NU22 5596 aa6.85□□□□□ -1.31
CTNS-203ENST00000399306 K7ERS5 55 aa6.82□□□□□ -1.32
CTNS-203ENST00000399306 A6NED7 52 aa6.8□□□□□ -1.32
CTNS-203ENST00000399306 C10orf95Q9H7T3 257 aa6.8□□□□□ -1.32
CTNS-203ENST00000399306 TNP1P09430 55 aa6.77□□□□□ -1.33
CTNS-203ENST00000399306 KRTAP4-11Q9BYQ6 195 aa6.75□□□□□ -1.33
CTNS-203ENST00000399306 SPRR2EP22531 72 aa6.67□□□□□ -1.34
CTNS-203ENST00000399306 SPRR2BP35325 72 aa6.67□□□□□ -1.34
CTNS-203ENST00000399306 SPRR2AP35326 72 aa6.67□□□□□ -1.34
CTNS-203ENST00000399306 LCE1AQ5T7P2 110 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms