RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 C5orf47Q569G3 176 aa6.89□□□□□ -1.31
RAB1A-201ENST00000398529 CYP4F30PQ9H0H9 118 aa6.89□□□□□ -1.31
RAB1A-201ENST00000398529 MP68P56378 58 aa6.88□□□□□ -1.31
RAB1A-201ENST00000398529 SMIM20Q8N5G0 67 aa6.87□□□□□ -1.31
RAB1A-201ENST00000398529 LINC00208Q96KT6 92 aa6.87□□□□□ -1.31
RAB1A-201ENST00000398529 C1orf64Q8NEQ6 169 aa6.86□□□□□ -1.31
RAB1A-201ENST00000398529 TRAV7A0A075B6U4 112 aa6.85□□□□□ -1.31
RAB1A-201ENST00000398529 C4orf26Q17RF5 130 aa6.85□□□□□ -1.31
RAB1A-201ENST00000398529 H3BPC8 53 aa6.83□□□□□ -1.32
RAB1A-201ENST00000398529 NEBP20929 6669 aa6.78□□□□□ -1.32
RAB1A-201ENST00000398529 H1FX-AS1Q4G0G2 97 aa6.78□□□□□ -1.32
RAB1A-201ENST00000398529 KLKP1Q107X0 134 aa6.77□□□□□ -1.33
RAB1A-201ENST00000398529 KRTAP3-1Q9BYR8 98 aa6.76□□□□□ -1.33
RAB1A-201ENST00000398529 SERP2Q8N6R1 65 aa6.75□□□□□ -1.33
RAB1A-201ENST00000398529 C20orf197Q8N268 126 aa6.67□□□□□ -1.34
RAB1A-201ENST00000398529 SNURFQ9Y675 71 aa6.67□□□□□ -1.34
RAB1A-201ENST00000398529 COX7CP15954 63 aa6.66□□□□□ -1.34
RAB1A-201ENST00000398529 A6NN06 94 aa6.65□□□□□ -1.34
RAB1A-201ENST00000398529 KRTAP20-1Q3LI63 56 aa6.65□□□□□ -1.34
RAB1A-201ENST00000398529 S4R3F8 94 aa6.65□□□□□ -1.34
RAB1A-201ENST00000398529 A8MUN3 132 aa6.64□□□□□ -1.35
RAB1A-201ENST00000398529 MUC12Q9UKN1 5478 aa6.62□□□□□ -1.35
RAB1A-201ENST00000398529 ANAPC13Q9BS18 74 aa6.61□□□□□ -1.35
RAB1A-201ENST00000398529 LCA10Q71F78 164 aa6.6□□□□□ -1.35
RAB1A-201ENST00000398529 DMAC1Q96GE9 116 aa6.59□□□□□ -1.35
RAB1A-201ENST00000398529 KRTAP4-8Q9BYQ9 185 aa6.57□□□□□ -1.36
RAB1A-201ENST00000398529 Q5VV11 94 aa6.54□□□□□ -1.36
RAB1A-201ENST00000398529 CSAG1Q6PB30 78 aa6.54□□□□□ -1.36
RAB1A-201ENST00000398529 SPANXA2-OT1Q8N9U9 137 aa6.53□□□□□ -1.36
RAB1A-201ENST00000398529 NDUFC1O43677 76 aa6.5□□□□□ -1.37
RAB1A-201ENST00000398529 ACYP2P14621 99 aa6.5□□□□□ -1.37
RAB1A-201ENST00000398529 CYSTM1Q9H1C7 97 aa6.49□□□□□ -1.37
RAB1A-201ENST00000398529 CCDC179H3BU77 68 aa6.47□□□□□ -1.37
RAB1A-201ENST00000398529 H7BZZ5 65 aa6.46□□□□□ -1.38
RAB1A-201ENST00000398529 MT1BP07438 61 aa6.44□□□□□ -1.38
RAB1A-201ENST00000398529 KRTAP5-9P26371 169 aa6.43□□□□□ -1.38
RAB1A-201ENST00000398529 KRTAP10-5P60370 271 aa6.42□□□□□ -1.38
RAB1A-201ENST00000398529 KRTAP19-8Q3LI54 63 aa6.4□□□□□ -1.38
RAB1A-201ENST00000398529 SPRR2GQ9BYE4 73 aa6.4□□□□□ -1.38
RAB1A-201ENST00000398529 MDN1Q9NU22 5596 aa6.4□□□□□ -1.39
RAB1A-201ENST00000398529 KMT2DO14686 5537 aa6.38□□□□□ -1.39
RAB1A-201ENST00000398529 KRTAP2-3P0C7H8 128 aa6.38□□□□□ -1.39
RAB1A-201ENST00000398529 KRTAP2-4Q9BYR9 128 aa6.38□□□□□ -1.39
RAB1A-201ENST00000398529 CHKB-CPT1BH3BT56 60 aa6.37□□□□□ -1.39
RAB1A-201ENST00000398529 H0YAA0 97 aa6.34□□□□□ -1.39
RAB1A-201ENST00000398529 SPTSSBQ8NFR3 76 aa6.34□□□□□ -1.39
RAB1A-201ENST00000398529 COA5Q86WW8 74 aa6.33□□□□□ -1.4
RAB1A-201ENST00000398529 ADM2Q7Z4H4 148 aa6.29□□□□□ -1.4
RAB1A-201ENST00000398529 ATP5EP56381 51 aaPredicted RBP6.28□□□□□ -1.4
RAB1A-201ENST00000398529 TMEM258P61165 79 aa6.25□□□□□ -1.41
RAB1A-201ENST00000398529 CRIPTQ9P021 101 aa6.25□□□□□ -1.41
RAB1A-201ENST00000398529 SPRR2EP22531 72 aa6.23□□□□□ -1.41
RAB1A-201ENST00000398529 SPRR2BP35325 72 aa6.23□□□□□ -1.41
RAB1A-201ENST00000398529 SPRR2AP35326 72 aa6.23□□□□□ -1.41
RAB1A-201ENST00000398529 SPRR2FQ96RM1 72 aa6.22□□□□□ -1.41
RAB1A-201ENST00000398529 P0C880 135 aa6.2□□□□□ -1.42
RAB1A-201ENST00000398529 LCE3BQ5TA77 95 aa6.19□□□□□ -1.42
RAB1A-201ENST00000398529 PCP4P48539 62 aa6.17□□□□□ -1.42
RAB1A-201ENST00000398529 PRO2289Q9P1D8 64 aa6.16□□□□□ -1.42
RAB1A-201ENST00000398529 KRTAP9-9Q9BYP9 154 aa6.15□□□□□ -1.42
RAB1A-201ENST00000398529 KRTAP9-4Q9BYQ2 154 aa6.15□□□□□ -1.42
RAB1A-201ENST00000398529 KRTAP2-2Q9BYT5 123 aa6.15□□□□□ -1.42
RAB1A-201ENST00000398529 KRTAP2-1Q9BYU5 128 aa6.15□□□□□ -1.42
RAB1A-201ENST00000398529 KRTAP4-8A0A0G2JLE6 195 aa6.14□□□□□ -1.43
RAB1A-201ENST00000398529 KRTAP8-1Q8IUC2 63 aa6.09□□□□□ -1.43
RAB1A-201ENST00000398529 R4GN34 69 aa6.09□□□□□ -1.43
RAB1A-201ENST00000398529 M0QZ58 72 aa6.07□□□□□ -1.44
RAB1A-201ENST00000398529 SEC61GP60059 68 aa6.07□□□□□ -1.44
RAB1A-201ENST00000398529 KRTAP4-12Q9BQ66 201 aa6.06□□□□□ -1.44
RAB1A-201ENST00000398529 SERP1Q9Y6X1 66 aa6.06□□□□□ -1.44
RAB1A-201ENST00000398529 SPRR2DP22532 72 aa6.03□□□□□ -1.44
RAB1A-201ENST00000398529 LCE1AQ5T7P2 110 aa6.03□□□□□ -1.44
RAB1A-201ENST00000398529 PLAC4Q8WY50 150 aa6.03□□□□□ -1.44
RAB1A-201ENST00000398529 A0A1B0GU69 56 aa5.99□□□□□ -1.45
RAB1A-201ENST00000398529 MT1XP80297 61 aa5.96□□□□□ -1.46
RAB1A-201ENST00000398529 KRTAP4-7Q9BYR0 210 aa5.96□□□□□ -1.46
RAB1A-201ENST00000398529 LINC01558Q9Y6Z2 57 aa5.96□□□□□ -1.46
RAB1A-201ENST00000398529 LINC01554Q52M75 96 aa5.95□□□□□ -1.46
RAB1A-201ENST00000398529 KRTAP13-4Q3LI77 160 aa5.94□□□□□ -1.46
RAB1A-201ENST00000398529 A0A1B0GU33 70 aa5.93□□□□□ -1.46
RAB1A-201ENST00000398529 KRTAP12-2P59991 146 aa5.93□□□□□ -1.46
RAB1A-201ENST00000398529 PRR15LQ9BU68 103 aa5.92□□□□□ -1.46
RAB1A-201ENST00000398529 SPATA8Q6RVD6 105 aa5.87□□□□□ -1.47
RAB1A-201ENST00000398529 RPS28P62857 69 aaKnown RBP5.85□□□□□ -1.47
RAB1A-201ENST00000398529 SMIM26A0A096LP01 95 aa5.84□□□□□ -1.47
RAB1A-201ENST00000398529 V9GYY9 64 aa5.84□□□□□ -1.47
RAB1A-201ENST00000398529 GPR98Q8WXG9 6306 aa5.84□□□□□ -1.47
RAB1A-201ENST00000398529 Q1T7F1 81 aa5.82□□□□□ -1.48
RAB1A-201ENST00000398529 A0A0D9SG42 100 aa5.79□□□□□ -1.48
RAB1A-201ENST00000398529 LCE1DQ5T752 114 aa5.79□□□□□ -1.48
RAB1A-201ENST00000398529 PSPHP1O15172 72 aa5.74□□□□□ -1.49
RAB1A-201ENST00000398529 KRTAP4-2Q9BYR5 136 aa5.74□□□□□ -1.49
RAB1A-201ENST00000398529 UQCR11O14957 56 aa5.73□□□□□ -1.49
RAB1A-201ENST00000398529 A8MU10 97 aa5.72□□□□□ -1.49
RAB1A-201ENST00000398529 KRTAP12-1P59990 96 aa5.7□□□□□ -1.5
RAB1A-201ENST00000398529 KRTAP4-9Q9BYQ8 210 aa5.7□□□□□ -1.5
RAB1A-201ENST00000398529 SPINT4Q6UDR6 99 aa5.69□□□□□ -1.5
RAB1A-201ENST00000398529 KRTAP10-12P60413 245 aa5.68□□□□□ -1.5
RAB1A-201ENST00000398529 KRTAP10-7P60409 375 aaPredicted RBP5.67□□□□□ -1.5
RAB1A-201ENST00000398529 CAMK2N1Q7Z7J9 78 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms