RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 XP32Q5T750 250 aa9.74□□□□□ -0.85
MBD1-208ENST00000398493 A6NED7 52 aa9.71□□□□□ -0.85
MBD1-208ENST00000398493 RPL37P61927 97 aaKnown RBP9.71□□□□□ -0.85
MBD1-208ENST00000398493 CDC42SE1Q9NRR8 79 aa9.66□□□□□ -0.86
MBD1-208ENST00000398493 LCA10Q71F78 164 aa9.59□□□□□ -0.88
MBD1-208ENST00000398493 A0A1B0GU69 56 aa9.58□□□□□ -0.88
MBD1-208ENST00000398493 SPTSSBQ8NFR3 76 aa9.58□□□□□ -0.88
MBD1-208ENST00000398493 COX6B2Q6YFQ2 88 aa9.55□□□□□ -0.88
MBD1-208ENST00000398493 SEC61BP60468 96 aaKnown RBP9.52□□□□□ -0.89
MBD1-208ENST00000398493 KRTAP3-1Q9BYR8 98 aa9.51□□□□□ -0.89
MBD1-208ENST00000398493 A8MU10 97 aa9.49□□□□□ -0.89
MBD1-208ENST00000398493 PMAIP1Q13794 54 aa9.49□□□□□ -0.89
MBD1-208ENST00000398493 KRTAP4-1Q9BYQ7 146 aa9.49□□□□□ -0.89
MBD1-208ENST00000398493 UQCR11O14957 56 aa9.42□□□□□ -0.9
MBD1-208ENST00000398493 SEC61GP60059 68 aa9.42□□□□□ -0.9
MBD1-208ENST00000398493 FAT4Q6V0I7 4981 aa9.4□□□□□ -0.91
MBD1-208ENST00000398493 SPATA8Q6RVD6 105 aa9.39□□□□□ -0.91
MBD1-208ENST00000398493 A6NN06 94 aa9.35□□□□□ -0.91
MBD1-208ENST00000398493 MIR22HGQ0VDD5 57 aa9.33□□□□□ -0.92
MBD1-208ENST00000398493 KTN1-AS1Q86SY8 53 aa9.28□□□□□ -0.92
MBD1-208ENST00000398493 RBM12B-AS1Q9P1G2 102 aa9.28□□□□□ -0.92
MBD1-208ENST00000398493 H1FX-AS1Q4G0G2 97 aa9.24□□□□□ -0.93
MBD1-208ENST00000398493 S4R3F8 94 aa9.24□□□□□ -0.93
MBD1-208ENST00000398493 KRTAP19-2Q3LHN2 52 aa9.19□□□□□ -0.94
MBD1-208ENST00000398493 KRTAP3-3Q9BYR6 98 aa9.15□□□□□ -0.95
MBD1-208ENST00000398493 LCE2CQ5TA81 110 aa9.12□□□□□ -0.95
MBD1-208ENST00000398493 A0A1B0GU33 70 aa9.12□□□□□ -0.95
MBD1-208ENST00000398493 FLGP20930 4061 aaPredicted RBP9.07□□□□□ -0.96
MBD1-208ENST00000398493 CSAG1Q6PB30 78 aa9.03□□□□□ -0.96
MBD1-208ENST00000398493 H0YAA0 97 aa9.02□□□□□ -0.97
MBD1-208ENST00000398493 LCE2AQ5TA79 106 aaPredicted RBP8.98□□□□□ -0.97
MBD1-208ENST00000398493 MT1HP80294 61 aa8.95□□□□□ -0.98
MBD1-208ENST00000398493 KRTAP10-6P60371 365 aaPredicted RBP8.93□□□□□ -0.98
MBD1-208ENST00000398493 KRTAP3-2Q9BYR7 98 aa8.9□□□□□ -0.98
MBD1-208ENST00000398493 K7ERS5 55 aa8.89□□□□□ -0.99
MBD1-208ENST00000398493 ADM2Q7Z4H4 148 aa8.87□□□□□ -0.99
MBD1-208ENST00000398493 P0C880 135 aa8.81□□□□□ -1
MBD1-208ENST00000398493 KRTAP9-2Q9BYQ4 174 aa8.78□□□□□ -1
MBD1-208ENST00000398493 M0R2T5 61 aa8.77□□□□□ -1
MBD1-208ENST00000398493 PRAC1Q96KF2 57 aa8.73□□□□□ -1.01
MBD1-208ENST00000398493 KRTAP13-4Q3LI77 160 aa8.7□□□□□ -1.02
MBD1-208ENST00000398493 M0QZ58 72 aa8.7□□□□□ -1.02
MBD1-208ENST00000398493 LORP23490 312 aaPredicted RBP8.67□□□□□ -1.02
MBD1-208ENST00000398493 A0A0D9SG42 100 aa8.66□□□□□ -1.02
MBD1-208ENST00000398493 KRTAP9-8Q9BYQ0 159 aa8.56□□□□□ -1.04
MBD1-208ENST00000398493 R4GN34 69 aa8.55□□□□□ -1.04
MBD1-208ENST00000398493 ROMO1P60602 79 aa8.54□□□□□ -1.04
MBD1-208ENST00000398493 LINC01554Q52M75 96 aa8.54□□□□□ -1.04
MBD1-208ENST00000398493 KRTAP9-6A0A140TA67 174 aa8.51□□□□□ -1.05
MBD1-208ENST00000398493 KRTAP25-1Q3LHN0 102 aa8.5□□□□□ -1.05
MBD1-208ENST00000398493 MT2AP02795 61 aa8.47□□□□□ -1.05
MBD1-208ENST00000398493 SPINT4Q6UDR6 99 aa8.46□□□□□ -1.06
MBD1-208ENST00000398493 KRTAP12-1P59990 96 aa8.43□□□□□ -1.06
MBD1-208ENST00000398493 MT1FP04733 61 aa8.43□□□□□ -1.06
MBD1-208ENST00000398493 LCE2DQ5TA82 110 aaPredicted RBP8.43□□□□□ -1.06
MBD1-208ENST00000398493 KRTAP12-2P59991 146 aa8.42□□□□□ -1.06
MBD1-208ENST00000398493 CRIPTQ9P021 101 aa8.37□□□□□ -1.07
MBD1-208ENST00000398493 KRTAP10-10P60014 251 aa8.35□□□□□ -1.07
MBD1-208ENST00000398493 FSIP2Q5CZC0 6907 aa8.32□□□□□ -1.08
MBD1-208ENST00000398493 USH2AO75445 5202 aa8.28□□□□□ -1.08
MBD1-208ENST00000398493 CRCT1Q9UGL9 99 aa8.27□□□□□ -1.09
MBD1-208ENST00000398493 KRTAP9-3Q9BYQ3 159 aa8.26□□□□□ -1.09
MBD1-208ENST00000398493 LCE2BO14633 110 aa8.15□□□□□ -1.11
MBD1-208ENST00000398493 SSPOA2VEC9 5147 aa8.13□□□□□ -1.11
MBD1-208ENST00000398493 KRTAP19-1Q8IUB9 90 aa8.08□□□□□ -1.12
MBD1-208ENST00000398493 CAMK2N1Q7Z7J9 78 aa8.07□□□□□ -1.12
MBD1-208ENST00000398493 SPRR2GQ9BYE4 73 aa8.04□□□□□ -1.12
MBD1-208ENST00000398493 C10orf95Q9H7T3 257 aa8□□□□□ -1.13
MBD1-208ENST00000398493 PLAC4Q8WY50 150 aa7.95□□□□□ -1.14
MBD1-208ENST00000398493 KRTAP19-8Q3LI54 63 aa7.87□□□□□ -1.15
MBD1-208ENST00000398493 MT1BP07438 61 aa7.85□□□□□ -1.15
MBD1-208ENST00000398493 PP632Q6XCG6 107 aa7.8□□□□□ -1.16
MBD1-208ENST00000398493 FCGBPQ9Y6R7 5405 aaPredicted RBP7.79□□□□□ -1.16
MBD1-208ENST00000398493 TNP1P09430 55 aa7.73□□□□□ -1.17
MBD1-208ENST00000398493 KRTAP19-6Q3LI70 58 aa7.72□□□□□ -1.17
MBD1-208ENST00000398493 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.71□□□□□ -1.18
MBD1-208ENST00000398493 KRTAP23-1A1A580 65 aa7.66□□□□□ -1.18
MBD1-208ENST00000398493 KRTAP9-7A8MTY7 169 aa7.65□□□□□ -1.18
MBD1-208ENST00000398493 KRTAP15-1Q3LI76 137 aa7.64□□□□□ -1.19
MBD1-208ENST00000398493 KRTAP10-5P60370 271 aa7.53□□□□□ -1.2
MBD1-208ENST00000398493 MACF1Q9UPN3 7388 aaKnown RBP7.48□□□□□ -1.21
MBD1-208ENST00000398493 MT1XP80297 61 aa7.48□□□□□ -1.21
MBD1-208ENST00000398493 PRO2289Q9P1D8 64 aa7.44□□□□□ -1.22
MBD1-208ENST00000398493 SYNE2Q8WXH0 6885 aaKnown RBP7.41□□□□□ -1.22
MBD1-208ENST00000398493 KMT2DO14686 5537 aa7.33□□□□□ -1.24
MBD1-208ENST00000398493 H3BS24 57 aa7.31□□□□□ -1.24
MBD1-208ENST00000398493 NDUFAF8A1L188 74 aa7.29□□□□□ -1.24
MBD1-208ENST00000398493 LCE3AQ5TA76 89 aa7.27□□□□□ -1.25
MBD1-208ENST00000398493 KRTAP10-12P60413 245 aa7.21□□□□□ -1.26
MBD1-208ENST00000398493 KRTAP10-7P60409 375 aaPredicted RBP7.17□□□□□ -1.26
MBD1-208ENST00000398493 LUZP6Q538Z0 58 aa7.16□□□□□ -1.26
MBD1-208ENST00000398493 KRTAP6-3Q3LI67 103 aa7.15□□□□□ -1.26
MBD1-208ENST00000398493 KRTAP8-1Q8IUC2 63 aa7.15□□□□□ -1.27
MBD1-208ENST00000398493 SPRR5A0A1B0GTR4 108 aa7.08□□□□□ -1.28
MBD1-208ENST00000398493 MUC12Q9UKN1 5478 aa7.06□□□□□ -1.28
MBD1-208ENST00000398493 KRTAP4-8A0A0G2JLE6 195 aa7.06□□□□□ -1.28
MBD1-208ENST00000398493 KRTAP4-8Q9BYQ9 185 aa7.06□□□□□ -1.28
MBD1-208ENST00000398493 KRTAP12-3P60328 96 aa7□□□□□ -1.29
MBD1-208ENST00000398493 MDN1Q9NU22 5596 aa6.93□□□□□ -1.3
MBD1-208ENST00000398493 NEBP20929 6669 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms