RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 KRTAP9-3Q9BYQ3 159 aa12.24□□□□□ -0.45
U2AF1-203ENST00000398137 S4R3F8 94 aa12.21□□□□□ -0.45
U2AF1-203ENST00000398137 SERP2Q8N6R1 65 aa12.17□□□□□ -0.46
U2AF1-203ENST00000398137 KRTAP10-10P60014 251 aa12.16□□□□□ -0.46
U2AF1-203ENST00000398137 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.13□□□□□ -0.47
U2AF1-203ENST00000398137 LCA10Q71F78 164 aa12.13□□□□□ -0.47
U2AF1-203ENST00000398137 SNURFQ9Y675 71 aa12.1□□□□□ -0.47
U2AF1-203ENST00000398137 A8MUN3 132 aa12.09□□□□□ -0.47
U2AF1-203ENST00000398137 FCGBPQ9Y6R7 5405 aaPredicted RBP12.07□□□□□ -0.48
U2AF1-203ENST00000398137 C20orf197Q8N268 126 aa12.06□□□□□ -0.48
U2AF1-203ENST00000398137 KRTAP19-1Q8IUB9 90 aa12.04□□□□□ -0.48
U2AF1-203ENST00000398137 CSAG1Q6PB30 78 aa12□□□□□ -0.49
U2AF1-203ENST00000398137 KRTAP9-7A8MTY7 169 aa11.99□□□□□ -0.49
U2AF1-203ENST00000398137 DMAC1Q96GE9 116 aa11.99□□□□□ -0.49
U2AF1-203ENST00000398137 COX7CP15954 63 aa11.96□□□□□ -0.49
U2AF1-203ENST00000398137 NDUFC1O43677 76 aa11.89□□□□□ -0.51
U2AF1-203ENST00000398137 ANAPC13Q9BS18 74 aa11.88□□□□□ -0.51
U2AF1-203ENST00000398137 SPANXA2-OT1Q8N9U9 137 aa11.79□□□□□ -0.52
U2AF1-203ENST00000398137 ACYP2P14621 99 aa11.78□□□□□ -0.52
U2AF1-203ENST00000398137 KRTAP19-6Q3LI70 58 aa11.78□□□□□ -0.52
U2AF1-203ENST00000398137 CYSTM1Q9H1C7 97 aa11.73□□□□□ -0.53
U2AF1-203ENST00000398137 MACF1Q9UPN3 7388 aaKnown RBP11.72□□□□□ -0.53
U2AF1-203ENST00000398137 H7BZZ5 65 aa11.65□□□□□ -0.54
U2AF1-203ENST00000398137 CCDC179H3BU77 68 aa11.63□□□□□ -0.55
U2AF1-203ENST00000398137 CHKB-CPT1BH3BT56 60 aa11.62□□□□□ -0.55
U2AF1-203ENST00000398137 H0YAA0 97 aa11.6□□□□□ -0.55
U2AF1-203ENST00000398137 SYNE2Q8WXH0 6885 aaKnown RBP11.59□□□□□ -0.55
U2AF1-203ENST00000398137 ADM2Q7Z4H4 148 aa11.55□□□□□ -0.56
U2AF1-203ENST00000398137 SPTSSBQ8NFR3 76 aa11.53□□□□□ -0.56
U2AF1-203ENST00000398137 COA5Q86WW8 74 aa11.48□□□□□ -0.57
U2AF1-203ENST00000398137 SPRR2GQ9BYE4 73 aa11.4□□□□□ -0.58
U2AF1-203ENST00000398137 CRIPTQ9P021 101 aa11.4□□□□□ -0.58
U2AF1-203ENST00000398137 LOC100996750A0A140TA64 210 aa11.39□□□□□ -0.59
U2AF1-203ENST00000398137 KRTAP4-6Q9BYQ5 205 aa11.39□□□□□ -0.59
U2AF1-203ENST00000398137 P0C880 135 aa11.38□□□□□ -0.59
U2AF1-203ENST00000398137 MT1BP07438 61 aa11.3□□□□□ -0.6
U2AF1-203ENST00000398137 ATP5EP56381 51 aaPredicted RBP11.26□□□□□ -0.61
U2AF1-203ENST00000398137 KRTAP6-3Q3LI67 103 aa11.26□□□□□ -0.61
U2AF1-203ENST00000398137 KRTAP19-8Q3LI54 63 aa11.24□□□□□ -0.61
U2AF1-203ENST00000398137 Q5VV11 94 aa11.21□□□□□ -0.61
U2AF1-203ENST00000398137 TMEM258P61165 79 aa11.19□□□□□ -0.62
U2AF1-203ENST00000398137 R4GN34 69 aa11.19□□□□□ -0.62
U2AF1-203ENST00000398137 M0QZ58 72 aa11.16□□□□□ -0.62
U2AF1-203ENST00000398137 A6NN06 94 aa11.1□□□□□ -0.63
U2AF1-203ENST00000398137 KRTAP10-5P60370 271 aa11.02□□□□□ -0.65
U2AF1-203ENST00000398137 SEC61GP60059 68 aa11.01□□□□□ -0.65
U2AF1-203ENST00000398137 LINC01554Q52M75 96 aa10.99□□□□□ -0.65
U2AF1-203ENST00000398137 SERP1Q9Y6X1 66 aa10.98□□□□□ -0.65
U2AF1-203ENST00000398137 PCP4P48539 62 aa10.93□□□□□ -0.66
U2AF1-203ENST00000398137 NEBP20929 6669 aa10.9□□□□□ -0.66
U2AF1-203ENST00000398137 MUC12Q9UKN1 5478 aa10.9□□□□□ -0.66
U2AF1-203ENST00000398137 KRTAP13-4Q3LI77 160 aa10.87□□□□□ -0.67
U2AF1-203ENST00000398137 A0A1B0GU69 56 aa10.86□□□□□ -0.67
U2AF1-203ENST00000398137 PLAC4Q8WY50 150 aa10.84□□□□□ -0.67
U2AF1-203ENST00000398137 A0A1B0GU33 70 aa10.78□□□□□ -0.68
U2AF1-203ENST00000398137 KRTAP5-9P26371 169 aa10.73□□□□□ -0.69
U2AF1-203ENST00000398137 LINC01558Q9Y6Z2 57 aa10.73□□□□□ -0.69
U2AF1-203ENST00000398137 SPATA8Q6RVD6 105 aa10.7□□□□□ -0.7
U2AF1-203ENST00000398137 PRR15LQ9BU68 103 aa10.69□□□□□ -0.7
U2AF1-203ENST00000398137 A0A0D9SG42 100 aa10.63□□□□□ -0.71
U2AF1-203ENST00000398137 MT1XP80297 61 aa10.63□□□□□ -0.71
U2AF1-203ENST00000398137 KMT2DO14686 5537 aa10.62□□□□□ -0.71
U2AF1-203ENST00000398137 KRTAP4-8Q9BYQ9 185 aa10.6□□□□□ -0.71
U2AF1-203ENST00000398137 PRO2289Q9P1D8 64 aa10.6□□□□□ -0.71
U2AF1-203ENST00000398137 MDN1Q9NU22 5596 aa10.54□□□□□ -0.72
U2AF1-203ENST00000398137 SMIM26A0A096LP01 95 aa10.46□□□□□ -0.73
U2AF1-203ENST00000398137 KRTAP20-1Q3LI63 56 aa10.46□□□□□ -0.73
U2AF1-203ENST00000398137 A8MU10 97 aa10.44□□□□□ -0.74
U2AF1-203ENST00000398137 V9GYY9 64 aa10.44□□□□□ -0.74
U2AF1-203ENST00000398137 Q1T7F1 81 aa10.42□□□□□ -0.74
U2AF1-203ENST00000398137 SPINT4Q6UDR6 99 aa10.41□□□□□ -0.74
U2AF1-203ENST00000398137 H3BS24 57 aa10.4□□□□□ -0.74
U2AF1-203ENST00000398137 CAMK2N1Q7Z7J9 78 aa10.4□□□□□ -0.74
U2AF1-203ENST00000398137 KRTAP12-1P59990 96 aa10.39□□□□□ -0.75
U2AF1-203ENST00000398137 RPS28P62857 69 aaKnown RBP10.38□□□□□ -0.75
U2AF1-203ENST00000398137 PSPHP1O15172 72 aa10.36□□□□□ -0.75
U2AF1-203ENST00000398137 UQCR11O14957 56 aa10.34□□□□□ -0.75
U2AF1-203ENST00000398137 KRTAP12-2P59991 146 aa10.34□□□□□ -0.75
U2AF1-203ENST00000398137 KRTAP4-12Q9BQ66 201 aa10.34□□□□□ -0.75
U2AF1-203ENST00000398137 SPRR2FQ96RM1 72 aa10.31□□□□□ -0.76
U2AF1-203ENST00000398137 KRTAP8-1Q8IUC2 63 aa10.21□□□□□ -0.77
U2AF1-203ENST00000398137 SPRR2EP22531 72 aa10.2□□□□□ -0.78
U2AF1-203ENST00000398137 SPRR2BP35325 72 aa10.2□□□□□ -0.78
U2AF1-203ENST00000398137 SPRR2AP35326 72 aa10.2□□□□□ -0.78
U2AF1-203ENST00000398137 MIR22HGQ0VDD5 57 aa10.19□□□□□ -0.78
U2AF1-203ENST00000398137 KRTAP10-7P60409 375 aaPredicted RBP10.17□□□□□ -0.78
U2AF1-203ENST00000398137 KRTAP4-8A0A0G2JLE6 195 aa10.16□□□□□ -0.78
U2AF1-203ENST00000398137 KRTAP2-3P0C7H8 128 aa10.16□□□□□ -0.78
U2AF1-203ENST00000398137 KRTAP2-4Q9BYR9 128 aa10.16□□□□□ -0.78
U2AF1-203ENST00000398137 LCE1AQ5T7P2 110 aa10.11□□□□□ -0.79
U2AF1-203ENST00000398137 LCE3BQ5TA77 95 aa10.08□□□□□ -0.8
U2AF1-203ENST00000398137 KRTAP10-12P60413 245 aa10.07□□□□□ -0.8
U2AF1-203ENST00000398137 A6NED7 52 aa10.03□□□□□ -0.8
U2AF1-203ENST00000398137 C10orf95Q9H7T3 257 aa9.88□□□□□ -0.83
U2AF1-203ENST00000398137 K7ERS5 55 aa9.86□□□□□ -0.83
U2AF1-203ENST00000398137 KRTAP9-9Q9BYP9 154 aa9.86□□□□□ -0.83
U2AF1-203ENST00000398137 KRTAP9-4Q9BYQ2 154 aa9.86□□□□□ -0.83
U2AF1-203ENST00000398137 SPRR2DP22532 72 aa9.84□□□□□ -0.83
U2AF1-203ENST00000398137 KRTAP2-2Q9BYT5 123 aa9.83□□□□□ -0.84
U2AF1-203ENST00000398137 KRTAP2-1Q9BYU5 128 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms