RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 RNF213Q63HN8 5207 aa9.42□□□□□ -0.9
TSPAN4-204ENST00000397404 SMIM26A0A096LP01 95 aa9.4□□□□□ -0.9
TSPAN4-204ENST00000397404 FLGP20930 4061 aaPredicted RBP9.38□□□□□ -0.91
TSPAN4-204ENST00000397404 LCA10Q71F78 164 aa9.38□□□□□ -0.91
TSPAN4-204ENST00000397404 V9GYY9 64 aa9.36□□□□□ -0.91
TSPAN4-204ENST00000397404 CSAG1Q6PB30 78 aa9.34□□□□□ -0.91
TSPAN4-204ENST00000397404 KRTAP3-3Q9BYR6 98 aa9.3□□□□□ -0.92
TSPAN4-204ENST00000397404 Q1T7F1 81 aa9.27□□□□□ -0.93
TSPAN4-204ENST00000397404 LCE2CQ5TA81 110 aa9.27□□□□□ -0.93
TSPAN4-204ENST00000397404 LINC01558Q9Y6Z2 57 aa9.22□□□□□ -0.93
TSPAN4-204ENST00000397404 SEC61GP60059 68 aa9.21□□□□□ -0.93
TSPAN4-204ENST00000397404 PRR15LQ9BU68 103 aa9.21□□□□□ -0.94
TSPAN4-204ENST00000397404 H0YAA0 97 aa9.2□□□□□ -0.94
TSPAN4-204ENST00000397404 FAT4Q6V0I7 4981 aa9.14□□□□□ -0.95
TSPAN4-204ENST00000397404 A0A1B0GU69 56 aa9.13□□□□□ -0.95
TSPAN4-204ENST00000397404 MT1HP80294 61 aa9.13□□□□□ -0.95
TSPAN4-204ENST00000397404 M0R2T5 61 aa9.08□□□□□ -0.96
TSPAN4-204ENST00000397404 ADM2Q7Z4H4 148 aa8.98□□□□□ -0.97
TSPAN4-204ENST00000397404 PSPHP1O15172 72 aa8.96□□□□□ -0.98
TSPAN4-204ENST00000397404 KRTAP3-2Q9BYR7 98 aa8.93□□□□□ -0.98
TSPAN4-204ENST00000397404 KRTAP10-6P60371 365 aaPredicted RBP8.92□□□□□ -0.98
TSPAN4-204ENST00000397404 Q5VV11 94 aa8.92□□□□□ -0.98
TSPAN4-204ENST00000397404 LCE2AQ5TA79 106 aaPredicted RBP8.9□□□□□ -0.98
TSPAN4-204ENST00000397404 A0A1B0GU33 70 aa8.89□□□□□ -0.99
TSPAN4-204ENST00000397404 CRIPTQ9P021 101 aa8.89□□□□□ -0.99
TSPAN4-204ENST00000397404 UQCR11O14957 56 aa8.88□□□□□ -0.99
TSPAN4-204ENST00000397404 M0QZ58 72 aa8.84□□□□□ -0.99
TSPAN4-204ENST00000397404 P0C880 135 aa8.84□□□□□ -0.99
TSPAN4-204ENST00000397404 LORP23490 312 aaPredicted RBP8.79□□□□□ -1
TSPAN4-204ENST00000397404 A6NED7 52 aa8.78□□□□□ -1
TSPAN4-204ENST00000397404 KRTAP9-8Q9BYQ0 159 aa8.77□□□□□ -1.01
TSPAN4-204ENST00000397404 R4GN34 69 aa8.77□□□□□ -1.01
TSPAN4-204ENST00000397404 MT2AP02795 61 aa8.72□□□□□ -1.01
TSPAN4-204ENST00000397404 MIR22HGQ0VDD5 57 aa8.7□□□□□ -1.02
TSPAN4-204ENST00000397404 KRTAP10-10P60014 251 aa8.69□□□□□ -1.02
TSPAN4-204ENST00000397404 SPATA8Q6RVD6 105 aa8.69□□□□□ -1.02
TSPAN4-204ENST00000397404 CDC42SE1Q9NRR8 79 aa8.65□□□□□ -1.02
TSPAN4-204ENST00000397404 MT1FP04733 61 aa8.64□□□□□ -1.03
TSPAN4-204ENST00000397404 SPRR2GQ9BYE4 73 aa8.59□□□□□ -1.03
TSPAN4-204ENST00000397404 KRTAP13-4Q3LI77 160 aa8.58□□□□□ -1.04
TSPAN4-204ENST00000397404 A6NN06 94 aa8.55□□□□□ -1.04
TSPAN4-204ENST00000397404 BRK1Q8WUW1 75 aa8.53□□□□□ -1.04
TSPAN4-204ENST00000397404 K7ERS5 55 aa8.49□□□□□ -1.05
TSPAN4-204ENST00000397404 KRTAP19-1Q8IUB9 90 aa8.47□□□□□ -1.05
TSPAN4-204ENST00000397404 KRTAP9-3Q9BYQ3 159 aa8.47□□□□□ -1.05
TSPAN4-204ENST00000397404 LINC01554Q52M75 96 aa8.45□□□□□ -1.06
TSPAN4-204ENST00000397404 A0A0D9SG42 100 aa8.44□□□□□ -1.06
TSPAN4-204ENST00000397404 A8MU10 97 aa8.43□□□□□ -1.06
TSPAN4-204ENST00000397404 KRTAP19-8Q3LI54 63 aa8.37□□□□□ -1.07
TSPAN4-204ENST00000397404 PRO0628Q9UI54 55 aa8.37□□□□□ -1.07
TSPAN4-204ENST00000397404 KRTAP12-1P59990 96 aa8.33□□□□□ -1.08
TSPAN4-204ENST00000397404 PLAC4Q8WY50 150 aa8.32□□□□□ -1.08
TSPAN4-204ENST00000397404 SPINT4Q6UDR6 99 aa8.31□□□□□ -1.08
TSPAN4-204ENST00000397404 KRTAP12-2P59991 146 aa8.26□□□□□ -1.09
TSPAN4-204ENST00000397404 LCE2DQ5TA82 110 aaPredicted RBP8.24□□□□□ -1.09
TSPAN4-204ENST00000397404 LCE2BO14633 110 aa8.19□□□□□ -1.1
TSPAN4-204ENST00000397404 CAMK2N1Q7Z7J9 78 aa8.18□□□□□ -1.1
TSPAN4-204ENST00000397404 MT1BP07438 61 aa8.16□□□□□ -1.1
TSPAN4-204ENST00000397404 SVIPQ8NHG7 77 aa8.14□□□□□ -1.11
TSPAN4-204ENST00000397404 PMAIP1Q13794 54 aa8.11□□□□□ -1.11
TSPAN4-204ENST00000397404 PRO2289Q9P1D8 64 aa8.04□□□□□ -1.12
TSPAN4-204ENST00000397404 ROMO1P60602 79 aa7.99□□□□□ -1.13
TSPAN4-204ENST00000397404 USH2AO75445 5202 aa7.99□□□□□ -1.13
TSPAN4-204ENST00000397404 KRTAP9-2Q9BYQ4 174 aa7.97□□□□□ -1.13
TSPAN4-204ENST00000397404 MT1XP80297 61 aa7.88□□□□□ -1.15
TSPAN4-204ENST00000397404 KRTAP10-5P60370 271 aa7.87□□□□□ -1.15
TSPAN4-204ENST00000397404 KRTAP19-6Q3LI70 58 aa7.87□□□□□ -1.15
TSPAN4-204ENST00000397404 C10orf95Q9H7T3 257 aa7.86□□□□□ -1.15
TSPAN4-204ENST00000397404 KRTAP25-1Q3LHN0 102 aa7.82□□□□□ -1.16
TSPAN4-204ENST00000397404 TNP1P09430 55 aa7.81□□□□□ -1.16
TSPAN4-204ENST00000397404 KTN1-AS1Q86SY8 53 aa7.76□□□□□ -1.17
TSPAN4-204ENST00000397404 SSPOA2VEC9 5147 aa7.75□□□□□ -1.17
TSPAN4-204ENST00000397404 KRTAP9-6A0A140TA67 174 aa7.67□□□□□ -1.18
TSPAN4-204ENST00000397404 FSIP2Q5CZC0 6907 aa7.65□□□□□ -1.18
TSPAN4-204ENST00000397404 KRTAP23-1A1A580 65 aa7.65□□□□□ -1.18
TSPAN4-204ENST00000397404 CRCT1Q9UGL9 99 aa7.61□□□□□ -1.19
TSPAN4-204ENST00000397404 PP632Q6XCG6 107 aa7.6□□□□□ -1.19
TSPAN4-204ENST00000397404 KRTAP10-12P60413 245 aa7.55□□□□□ -1.2
TSPAN4-204ENST00000397404 KRTAP10-7P60409 375 aaPredicted RBP7.5□□□□□ -1.21
TSPAN4-204ENST00000397404 FCGBPQ9Y6R7 5405 aaPredicted RBP7.46□□□□□ -1.22
TSPAN4-204ENST00000397404 PRAC1Q96KF2 57 aa7.43□□□□□ -1.22
TSPAN4-204ENST00000397404 LCE3AQ5TA76 89 aa7.34□□□□□ -1.23
TSPAN4-204ENST00000397404 KRTAP8-1Q8IUC2 63 aa7.3□□□□□ -1.24
TSPAN4-204ENST00000397404 KRTAP4-8A0A0G2JLE6 195 aa7.18□□□□□ -1.26
TSPAN4-204ENST00000397404 KRTAP4-8Q9BYQ9 185 aa7.18□□□□□ -1.26
TSPAN4-204ENST00000397404 KMT2DO14686 5537 aa7.14□□□□□ -1.27
TSPAN4-204ENST00000397404 KRTAP12-3P60328 96 aa7.13□□□□□ -1.27
TSPAN4-204ENST00000397404 MACF1Q9UPN3 7388 aaKnown RBP7.08□□□□□ -1.28
TSPAN4-204ENST00000397404 KRTAP19-5Q3LI72 72 aa7.06□□□□□ -1.28
TSPAN4-204ENST00000397404 KRTAP19-7Q3SYF9 63 aa7.03□□□□□ -1.28
TSPAN4-204ENST00000397404 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.02□□□□□ -1.29
TSPAN4-204ENST00000397404 KRTAP19-4Q3LI73 84 aa7.02□□□□□ -1.29
TSPAN4-204ENST00000397404 KRTAP15-1Q3LI76 137 aa6.98□□□□□ -1.29
TSPAN4-204ENST00000397404 KRTAP5-9P26371 169 aa6.97□□□□□ -1.29
TSPAN4-204ENST00000397404 MT1EP04732 61 aa6.94□□□□□ -1.3
TSPAN4-204ENST00000397404 KRTAP9-7A8MTY7 169 aa6.91□□□□□ -1.3
TSPAN4-204ENST00000397404 KRTAP6-3Q3LI67 103 aa6.91□□□□□ -1.3
TSPAN4-204ENST00000397404 SPRR2FQ96RM1 72 aa6.9□□□□□ -1.31
TSPAN4-204ENST00000397404 SYNE2Q8WXH0 6885 aaKnown RBP6.87□□□□□ -1.31
TSPAN4-204ENST00000397404 MT1LQ93083 61 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms