RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 FAM236CP0DP71 79 aa6.4□□□□□ -1.38
LMCD1-202ENST00000397386 KRTAP3-1Q9BYR8 98 aa6.4□□□□□ -1.39
LMCD1-202ENST00000397386 ACYP2P14621 99 aa6.37□□□□□ -1.39
LMCD1-202ENST00000397386 KRTAP19-2Q3LHN2 52 aa6.35□□□□□ -1.39
LMCD1-202ENST00000397386 H1FX-AS1Q4G0G2 97 aa6.34□□□□□ -1.39
LMCD1-202ENST00000397386 PMAIP1Q13794 54 aa6.3□□□□□ -1.4
LMCD1-202ENST00000397386 COA5Q86WW8 74 aa6.27□□□□□ -1.41
LMCD1-202ENST00000397386 LCE2CQ5TA81 110 aa6.25□□□□□ -1.41
LMCD1-202ENST00000397386 SERP1Q9Y6X1 66 aa6.25□□□□□ -1.41
LMCD1-202ENST00000397386 S4R3F8 94 aa6.25□□□□□ -1.41
LMCD1-202ENST00000397386 SMIM26A0A096LP01 95 aa6.24□□□□□ -1.41
LMCD1-202ENST00000397386 CHKB-CPT1BH3BT56 60 aa6.24□□□□□ -1.41
LMCD1-202ENST00000397386 FAT4Q6V0I7 4981 aa6.23□□□□□ -1.41
LMCD1-202ENST00000397386 LCE2AQ5TA79 106 aaPredicted RBP6.22□□□□□ -1.41
LMCD1-202ENST00000397386 LCA10Q71F78 164 aa6.21□□□□□ -1.42
LMCD1-202ENST00000397386 SPTSSBQ8NFR3 76 aa6.2□□□□□ -1.42
LMCD1-202ENST00000397386 FLGP20930 4061 aaPredicted RBP6.16□□□□□ -1.42
LMCD1-202ENST00000397386 CSAG1Q6PB30 78 aa6.15□□□□□ -1.42
LMCD1-202ENST00000397386 MT1HP80294 61 aa6.14□□□□□ -1.43
LMCD1-202ENST00000397386 BRK1Q8WUW1 75 aa6.1□□□□□ -1.43
LMCD1-202ENST00000397386 M0R2T5 61 aa6.05□□□□□ -1.44
LMCD1-202ENST00000397386 H0YAA0 97 aa6.04□□□□□ -1.44
LMCD1-202ENST00000397386 LOC100996750A0A140TA64 210 aa6.03□□□□□ -1.44
LMCD1-202ENST00000397386 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
LMCD1-202ENST00000397386 Q1T7F1 81 aa6□□□□□ -1.45
LMCD1-202ENST00000397386 KTN1-AS1Q86SY8 53 aa6□□□□□ -1.45
LMCD1-202ENST00000397386 LINC01558Q9Y6Z2 57 aa6□□□□□ -1.45
LMCD1-202ENST00000397386 A0A1B0GU69 56 aa5.95□□□□□ -1.46
LMCD1-202ENST00000397386 LORP23490 312 aaPredicted RBP5.94□□□□□ -1.46
LMCD1-202ENST00000397386 KRTAP10-6P60371 365 aaPredicted RBP5.94□□□□□ -1.46
LMCD1-202ENST00000397386 PRR15LQ9BU68 103 aa5.94□□□□□ -1.46
LMCD1-202ENST00000397386 ADM2Q7Z4H4 148 aa5.93□□□□□ -1.46
LMCD1-202ENST00000397386 KRTAP9-8Q9BYQ0 159 aa5.89□□□□□ -1.47
LMCD1-202ENST00000397386 P0C880 135 aa5.87□□□□□ -1.47
LMCD1-202ENST00000397386 MT2AP02795 61 aa5.86□□□□□ -1.47
LMCD1-202ENST00000397386 PSPHP1O15172 72 aa5.84□□□□□ -1.47
LMCD1-202ENST00000397386 CRIPTQ9P021 101 aa5.84□□□□□ -1.48
LMCD1-202ENST00000397386 A0A1B0GU33 70 aa5.81□□□□□ -1.48
LMCD1-202ENST00000397386 MT1FP04733 61 aa5.81□□□□□ -1.48
LMCD1-202ENST00000397386 Q5VV11 94 aa5.81□□□□□ -1.48
LMCD1-202ENST00000397386 A0A0A0MQY5 61 aa5.8□□□□□ -1.48
LMCD1-202ENST00000397386 KRTAP10-10P60014 251 aa5.8□□□□□ -1.48
LMCD1-202ENST00000397386 M0QZ58 72 aa5.79□□□□□ -1.48
LMCD1-202ENST00000397386 UQCR11O14957 56 aa5.76□□□□□ -1.49
LMCD1-202ENST00000397386 R4GN34 69 aa5.76□□□□□ -1.49
LMCD1-202ENST00000397386 SPRR2GQ9BYE4 73 aa5.72□□□□□ -1.49
LMCD1-202ENST00000397386 KRTAP13-4Q3LI77 160 aa5.7□□□□□ -1.5
LMCD1-202ENST00000397386 A6NED7 52 aa5.69□□□□□ -1.5
LMCD1-202ENST00000397386 KRTAP9-3Q9BYQ3 159 aa5.69□□□□□ -1.5
LMCD1-202ENST00000397386 SPATA8Q6RVD6 105 aa5.68□□□□□ -1.5
LMCD1-202ENST00000397386 KRTAP19-1Q8IUB9 90 aa5.68□□□□□ -1.5
LMCD1-202ENST00000397386 MIR22HGQ0VDD5 57 aa5.66□□□□□ -1.5
LMCD1-202ENST00000397386 A6NN06 94 aa5.64□□□□□ -1.51
LMCD1-202ENST00000397386 LINC01554Q52M75 96 aa5.64□□□□□ -1.51
LMCD1-202ENST00000397386 CDC42SE1Q9NRR8 79 aa5.59□□□□□ -1.51
LMCD1-202ENST00000397386 KRTAP9-2Q9BYQ4 174 aa5.58□□□□□ -1.52
LMCD1-202ENST00000397386 KRTAP19-8Q3LI54 63 aa5.58□□□□□ -1.52
LMCD1-202ENST00000397386 A8MU10 97 aa5.57□□□□□ -1.52
LMCD1-202ENST00000397386 A0A0D9SG42 100 aa5.56□□□□□ -1.52
LMCD1-202ENST00000397386 KRTAP12-1P59990 96 aa5.5□□□□□ -1.53
LMCD1-202ENST00000397386 MT1BP07438 61 aa5.48□□□□□ -1.53
LMCD1-202ENST00000397386 USH2AO75445 5202 aa5.48□□□□□ -1.53
LMCD1-202ENST00000397386 PLAC4Q8WY50 150 aa5.48□□□□□ -1.53
LMCD1-202ENST00000397386 K7ERS5 55 aa5.47□□□□□ -1.53
LMCD1-202ENST00000397386 KRTAP12-2P59991 146 aa5.46□□□□□ -1.54
LMCD1-202ENST00000397386 SPINT4Q6UDR6 99 aa5.46□□□□□ -1.54
LMCD1-202ENST00000397386 KRTAP23-1A1A580 65 aa5.45□□□□□ -1.54
LMCD1-202ENST00000397386 FSIP2Q5CZC0 6907 aa5.43□□□□□ -1.54
LMCD1-202ENST00000397386 SSPOA2VEC9 5147 aa5.38□□□□□ -1.55
LMCD1-202ENST00000397386 CAMK2N1Q7Z7J9 78 aa5.37□□□□□ -1.55
LMCD1-202ENST00000397386 CRCT1Q9UGL9 99 aa5.32□□□□□ -1.56
LMCD1-202ENST00000397386 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
LMCD1-202ENST00000397386 PRO2289Q9P1D8 64 aa5.29□□□□□ -1.56
LMCD1-202ENST00000397386 KRTAP9-6A0A140TA67 174 aa5.28□□□□□ -1.56
LMCD1-202ENST00000397386 KRTAP19-6Q3LI70 58 aa5.28□□□□□ -1.56
LMCD1-202ENST00000397386 MT1XP80297 61 aa5.28□□□□□ -1.56
LMCD1-202ENST00000397386 KRTAP10-5P60370 271 aa5.26□□□□□ -1.57
LMCD1-202ENST00000397386 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.23□□□□□ -1.57
LMCD1-202ENST00000397386 ROMO1P60602 79 aa5.22□□□□□ -1.57
LMCD1-202ENST00000397386 C10orf95Q9H7T3 257 aa5.21□□□□□ -1.58
LMCD1-202ENST00000397386 FCGBPQ9Y6R7 5405 aaPredicted RBP5.16□□□□□ -1.58
LMCD1-202ENST00000397386 PRAC1Q96KF2 57 aa5.16□□□□□ -1.58
LMCD1-202ENST00000397386 TNP1P09430 55 aa5.11□□□□□ -1.59
LMCD1-202ENST00000397386 KRTAP25-1Q3LHN0 102 aa5.1□□□□□ -1.59
LMCD1-202ENST00000397386 KRTAP10-7P60409 375 aaPredicted RBP5.03□□□□□ -1.6
LMCD1-202ENST00000397386 KRTAP10-12P60413 245 aa5.03□□□□□ -1.6
LMCD1-202ENST00000397386 LCE3BQ5TA77 95 aa5.02□□□□□ -1.61
LMCD1-202ENST00000397386 KRTAP4-8A0A0G2JLE6 195 aa4.98□□□□□ -1.61
LMCD1-202ENST00000397386 KRTAP4-12Q9BQ66 201 aa4.98□□□□□ -1.61
LMCD1-202ENST00000397386 LUZP6Q538Z0 58 aa4.97□□□□□ -1.61
LMCD1-202ENST00000397386 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
LMCD1-202ENST00000397386 KRTAP9-4Q9BYQ2 154 aa4.93□□□□□ -1.62
LMCD1-202ENST00000397386 PP632Q6XCG6 107 aa4.92□□□□□ -1.62
LMCD1-202ENST00000397386 MACF1Q9UPN3 7388 aaKnown RBP4.91□□□□□ -1.62
LMCD1-202ENST00000397386 LCE3AQ5TA76 89 aa4.87□□□□□ -1.63
LMCD1-202ENST00000397386 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
LMCD1-202ENST00000397386 KRTAP8-1Q8IUC2 63 aa4.82□□□□□ -1.64
LMCD1-202ENST00000397386 KMT2DO14686 5537 aa4.82□□□□□ -1.64
LMCD1-202ENST00000397386 SYNE2Q8WXH0 6885 aaKnown RBP4.78□□□□□ -1.64
LMCD1-202ENST00000397386 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms