RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 FSIP2Q5CZC0 6907 aa13.7□□□□□ -0.22
CHCHD4-202ENST00000396914 KRTAP9-6A0A140TA67 174 aa13.7□□□□□ -0.22
CHCHD4-202ENST00000396914 SERP2Q8N6R1 65 aa13.7□□□□□ -0.22
CHCHD4-202ENST00000396914 SNURFQ9Y675 71 aa13.69□□□□□ -0.22
CHCHD4-202ENST00000396914 CRCT1Q9UGL9 99 aa13.67□□□□□ -0.22
CHCHD4-202ENST00000396914 DMAC1Q96GE9 116 aa13.64□□□□□ -0.23
CHCHD4-202ENST00000396914 C20orf197Q8N268 126 aa13.63□□□□□ -0.23
CHCHD4-202ENST00000396914 LCE2BO14633 110 aa13.58□□□□□ -0.24
CHCHD4-202ENST00000396914 USH2AO75445 5202 aa13.48□□□□□ -0.25
CHCHD4-202ENST00000396914 ACYP2P14621 99 aa13.47□□□□□ -0.25
CHCHD4-202ENST00000396914 COX7CP15954 63 aa13.42□□□□□ -0.26
CHCHD4-202ENST00000396914 H0YAA0 97 aa13.35□□□□□ -0.27
CHCHD4-202ENST00000396914 SPANXA2-OT1Q8N9U9 137 aa13.35□□□□□ -0.27
CHCHD4-202ENST00000396914 ADM2Q7Z4H4 148 aa13.34□□□□□ -0.27
CHCHD4-202ENST00000396914 CHKB-CPT1BH3BT56 60 aa13.3□□□□□ -0.28
CHCHD4-202ENST00000396914 ANAPC13Q9BS18 74 aa13.3□□□□□ -0.28
CHCHD4-202ENST00000396914 KRTAP19-1Q8IUB9 90 aa13.29□□□□□ -0.28
CHCHD4-202ENST00000396914 SPTSSBQ8NFR3 76 aa13.24□□□□□ -0.29
CHCHD4-202ENST00000396914 SSPOA2VEC9 5147 aa13.24□□□□□ -0.29
CHCHD4-202ENST00000396914 CRIPTQ9P021 101 aa13.23□□□□□ -0.29
CHCHD4-202ENST00000396914 SPRR2GQ9BYE4 73 aa13.21□□□□□ -0.3
CHCHD4-202ENST00000396914 CYSTM1Q9H1C7 97 aa13.11□□□□□ -0.31
CHCHD4-202ENST00000396914 Q5VV11 94 aa13.08□□□□□ -0.32
CHCHD4-202ENST00000396914 H7BZZ5 65 aa13.07□□□□□ -0.32
CHCHD4-202ENST00000396914 P0C880 135 aa13.05□□□□□ -0.32
CHCHD4-202ENST00000396914 KRTAP19-8Q3LI54 63 aa13.03□□□□□ -0.32
CHCHD4-202ENST00000396914 KRTAP19-6Q3LI70 58 aa13.01□□□□□ -0.33
CHCHD4-202ENST00000396914 COA5Q86WW8 74 aa13□□□□□ -0.33
CHCHD4-202ENST00000396914 KRTAP3-2Q9BYR7 98 aa12.98□□□□□ -0.33
CHCHD4-202ENST00000396914 CCDC179H3BU77 68 aa12.97□□□□□ -0.33
CHCHD4-202ENST00000396914 MT1BP07438 61 aa12.97□□□□□ -0.33
CHCHD4-202ENST00000396914 R4GN34 69 aa12.96□□□□□ -0.33
CHCHD4-202ENST00000396914 M0QZ58 72 aa12.89□□□□□ -0.35
CHCHD4-202ENST00000396914 FCGBPQ9Y6R7 5405 aaPredicted RBP12.88□□□□□ -0.35
CHCHD4-202ENST00000396914 LINC01554Q52M75 96 aa12.73□□□□□ -0.37
CHCHD4-202ENST00000396914 A6NN06 94 aa12.71□□□□□ -0.37
CHCHD4-202ENST00000396914 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.68□□□□□ -0.38
CHCHD4-202ENST00000396914 PLAC4Q8WY50 150 aa12.66□□□□□ -0.38
CHCHD4-202ENST00000396914 SEC61GP60059 68 aa12.64□□□□□ -0.39
CHCHD4-202ENST00000396914 ATP5EP56381 51 aaPredicted RBP12.63□□□□□ -0.39
CHCHD4-202ENST00000396914 SERP1Q9Y6X1 66 aa12.6□□□□□ -0.39
CHCHD4-202ENST00000396914 KRTAP10-5P60370 271 aa12.57□□□□□ -0.4
CHCHD4-202ENST00000396914 TMEM258P61165 79 aa12.5□□□□□ -0.41
CHCHD4-202ENST00000396914 PRO2289Q9P1D8 64 aa12.4□□□□□ -0.42
CHCHD4-202ENST00000396914 KRTAP13-4Q3LI77 160 aa12.39□□□□□ -0.43
CHCHD4-202ENST00000396914 MACF1Q9UPN3 7388 aaKnown RBP12.38□□□□□ -0.43
CHCHD4-202ENST00000396914 KRTAP9-7A8MTY7 169 aa12.38□□□□□ -0.43
CHCHD4-202ENST00000396914 A0A1B0GU69 56 aa12.37□□□□□ -0.43
CHCHD4-202ENST00000396914 A0A1B0GU33 70 aa12.32□□□□□ -0.44
CHCHD4-202ENST00000396914 MT1XP80297 61 aa12.3□□□□□ -0.44
CHCHD4-202ENST00000396914 SPATA8Q6RVD6 105 aa12.23□□□□□ -0.45
CHCHD4-202ENST00000396914 A0A0D9SG42 100 aa12.19□□□□□ -0.46
CHCHD4-202ENST00000396914 PRR15LQ9BU68 103 aa12.17□□□□□ -0.46
CHCHD4-202ENST00000396914 SYNE2Q8WXH0 6885 aaKnown RBP12.15□□□□□ -0.46
CHCHD4-202ENST00000396914 LINC01558Q9Y6Z2 57 aa12.08□□□□□ -0.48
CHCHD4-202ENST00000396914 CAMK2N1Q7Z7J9 78 aa12.05□□□□□ -0.48
CHCHD4-202ENST00000396914 KRTAP6-3Q3LI67 103 aa12.02□□□□□ -0.49
CHCHD4-202ENST00000396914 SPINT4Q6UDR6 99 aa11.99□□□□□ -0.49
CHCHD4-202ENST00000396914 PCP4P48539 62 aa11.98□□□□□ -0.49
CHCHD4-202ENST00000396914 SMIM26A0A096LP01 95 aa11.97□□□□□ -0.49
CHCHD4-202ENST00000396914 A8MU10 97 aa11.88□□□□□ -0.51
CHCHD4-202ENST00000396914 KRTAP12-2P59991 146 aa11.86□□□□□ -0.51
CHCHD4-202ENST00000396914 KRTAP12-1P59990 96 aa11.86□□□□□ -0.51
CHCHD4-202ENST00000396914 KRTAP10-7P60409 375 aaPredicted RBP11.78□□□□□ -0.52
CHCHD4-202ENST00000396914 V9GYY9 64 aa11.75□□□□□ -0.53
CHCHD4-202ENST00000396914 UQCR11O14957 56 aa11.74□□□□□ -0.53
CHCHD4-202ENST00000396914 KMT2DO14686 5537 aa11.71□□□□□ -0.53
CHCHD4-202ENST00000396914 KRTAP8-1Q8IUC2 63 aa11.69□□□□□ -0.54
CHCHD4-202ENST00000396914 KRTAP10-12P60413 245 aa11.67□□□□□ -0.54
CHCHD4-202ENST00000396914 PSPHP1O15172 72 aa11.65□□□□□ -0.54
CHCHD4-202ENST00000396914 KRTAP5-9P26371 169 aa11.65□□□□□ -0.54
CHCHD4-202ENST00000396914 Q1T7F1 81 aa11.65□□□□□ -0.54
CHCHD4-202ENST00000396914 KRTAP4-8A0A0G2JLE6 195 aa11.63□□□□□ -0.55
CHCHD4-202ENST00000396914 KRTAP4-8Q9BYQ9 185 aa11.63□□□□□ -0.55
CHCHD4-202ENST00000396914 SPRR2FQ96RM1 72 aa11.55□□□□□ -0.56
CHCHD4-202ENST00000396914 MIR22HGQ0VDD5 57 aa11.53□□□□□ -0.56
CHCHD4-202ENST00000396914 RPS28P62857 69 aaKnown RBP11.5□□□□□ -0.57
CHCHD4-202ENST00000396914 MUC12Q9UKN1 5478 aa11.47□□□□□ -0.57
CHCHD4-202ENST00000396914 NEBP20929 6669 aa11.31□□□□□ -0.6
CHCHD4-202ENST00000396914 A6NED7 52 aa11.3□□□□□ -0.6
CHCHD4-202ENST00000396914 C10orf95Q9H7T3 257 aa11.28□□□□□ -0.6
CHCHD4-202ENST00000396914 K7ERS5 55 aa11.26□□□□□ -0.61
CHCHD4-202ENST00000396914 SPRR2EP22531 72 aa11.26□□□□□ -0.61
CHCHD4-202ENST00000396914 SPRR2BP35325 72 aa11.26□□□□□ -0.61
CHCHD4-202ENST00000396914 SPRR2AP35326 72 aa11.26□□□□□ -0.61
CHCHD4-202ENST00000396914 MDN1Q9NU22 5596 aa11.26□□□□□ -0.61
CHCHD4-202ENST00000396914 TNP1P09430 55 aa11.2□□□□□ -0.62
CHCHD4-202ENST00000396914 LCE1AQ5T7P2 110 aa11.11□□□□□ -0.63
CHCHD4-202ENST00000396914 KRTAP19-7Q3SYF9 63 aa10.97□□□□□ -0.65
CHCHD4-202ENST00000396914 KRTAP20-1Q3LI63 56 aa10.93□□□□□ -0.66
CHCHD4-202ENST00000396914 LCE3AQ5TA76 89 aa10.93□□□□□ -0.66
CHCHD4-202ENST00000396914 KRTAP19-5Q3LI72 72 aa10.9□□□□□ -0.66
CHCHD4-202ENST00000396914 SPRR2DP22532 72 aa10.88□□□□□ -0.67
CHCHD4-202ENST00000396914 MT1EP04732 61 aa10.86□□□□□ -0.67
CHCHD4-202ENST00000396914 CDC42SE1Q9NRR8 79 aa10.83□□□□□ -0.68
CHCHD4-202ENST00000396914 KRTAP25-1Q3LHN0 102 aa10.8□□□□□ -0.68
CHCHD4-202ENST00000396914 KRTAP2-3P0C7H8 128 aa10.77□□□□□ -0.68
CHCHD4-202ENST00000396914 KRTAP2-4Q9BYR9 128 aa10.77□□□□□ -0.68
CHCHD4-202ENST00000396914 KRTAP19-3Q7Z4W3 81 aa10.68□□□□□ -0.7
CHCHD4-202ENST00000396914 LCE5AQ5TCM9 118 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms