RNA–Protein interactions for RNA: ENST00000396344.4

HOXA10-202, Transcript of homeobox A10, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HOXA10, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10-202ENST00000396344 XP32Q5T750 250 aa8.96□□□□□ -0.97
HOXA10-202ENST00000396344 Q5VV11 94 aa8.95□□□□□ -0.98
HOXA10-202ENST00000396344 BRK1Q8WUW1 75 aa8.94□□□□□ -0.98
HOXA10-202ENST00000396344 MUC2Q02817 5179 aa8.89□□□□□ -0.99
HOXA10-202ENST00000396344 COX6B2Q6YFQ2 88 aa8.87□□□□□ -0.99
HOXA10-202ENST00000396344 MUC17Q685J3 4493 aa8.85□□□□□ -0.99
HOXA10-202ENST00000396344 A0A1B0GU69 56 aa8.84□□□□□ -0.99
HOXA10-202ENST00000396344 A6NED7 52 aa8.82□□□□□ -1
HOXA10-202ENST00000396344 SEC61BP60468 96 aaKnown RBP8.79□□□□□ -1
HOXA10-202ENST00000396344 FAT4Q6V0I7 4981 aa8.75□□□□□ -1.01
HOXA10-202ENST00000396344 KRTAP3-1Q9BYR8 98 aa8.74□□□□□ -1.01
HOXA10-202ENST00000396344 CDC42SE1Q9NRR8 79 aa8.73□□□□□ -1.01
HOXA10-202ENST00000396344 LCE2AQ5TA79 106 aaPredicted RBP8.69□□□□□ -1.02
HOXA10-202ENST00000396344 UQCR11O14957 56 aa8.65□□□□□ -1.03
HOXA10-202ENST00000396344 KTN1-AS1Q86SY8 53 aa8.65□□□□□ -1.03
HOXA10-202ENST00000396344 RBM12B-AS1Q9P1G2 102 aa8.64□□□□□ -1.03
HOXA10-202ENST00000396344 KRTAP4-1Q9BYQ7 146 aa8.63□□□□□ -1.03
HOXA10-202ENST00000396344 S4R3F8 94 aa8.6□□□□□ -1.03
HOXA10-202ENST00000396344 LCA10Q71F78 164 aa8.59□□□□□ -1.03
HOXA10-202ENST00000396344 H1FX-AS1Q4G0G2 97 aa8.57□□□□□ -1.04
HOXA10-202ENST00000396344 MIR22HGQ0VDD5 57 aa8.54□□□□□ -1.04
HOXA10-202ENST00000396344 SPATA8Q6RVD6 105 aa8.53□□□□□ -1.04
HOXA10-202ENST00000396344 H3BS24 57 aa8.47□□□□□ -1.05
HOXA10-202ENST00000396344 A8MU10 97 aa8.45□□□□□ -1.06
HOXA10-202ENST00000396344 A0A1B0GU33 70 aa8.44□□□□□ -1.06
HOXA10-202ENST00000396344 KRTAP19-2Q3LHN2 52 aa8.44□□□□□ -1.06
HOXA10-202ENST00000396344 LCE2CQ5TA81 110 aa8.44□□□□□ -1.06
HOXA10-202ENST00000396344 KRTAP3-3Q9BYR6 98 aa8.43□□□□□ -1.06
HOXA10-202ENST00000396344 KRTAP9-2Q9BYQ4 174 aa8.42□□□□□ -1.06
HOXA10-202ENST00000396344 CSAG1Q6PB30 78 aa8.38□□□□□ -1.07
HOXA10-202ENST00000396344 A6NN06 94 aa8.33□□□□□ -1.08
HOXA10-202ENST00000396344 MT1HP80294 61 aa8.32□□□□□ -1.08
HOXA10-202ENST00000396344 H0YAA0 97 aa8.29□□□□□ -1.08
HOXA10-202ENST00000396344 LCE2DQ5TA82 110 aaPredicted RBP8.26□□□□□ -1.09
HOXA10-202ENST00000396344 FLGP20930 4061 aaPredicted RBP8.24□□□□□ -1.09
HOXA10-202ENST00000396344 K7ERS5 55 aa8.24□□□□□ -1.09
HOXA10-202ENST00000396344 KRTAP10-6P60371 365 aaPredicted RBP8.24□□□□□ -1.09
HOXA10-202ENST00000396344 KRTAP3-2Q9BYR7 98 aa8.22□□□□□ -1.09
HOXA10-202ENST00000396344 ADM2Q7Z4H4 148 aa8.2□□□□□ -1.1
HOXA10-202ENST00000396344 LORP23490 312 aaPredicted RBP8.18□□□□□ -1.1
HOXA10-202ENST00000396344 M0R2T5 61 aa8.17□□□□□ -1.1
HOXA10-202ENST00000396344 KRTAP9-6A0A140TA67 174 aa8.13□□□□□ -1.11
HOXA10-202ENST00000396344 M0QZ58 72 aa8.12□□□□□ -1.11
HOXA10-202ENST00000396344 P0C880 135 aa8.12□□□□□ -1.11
HOXA10-202ENST00000396344 LINC01554Q52M75 96 aa8.11□□□□□ -1.11
HOXA10-202ENST00000396344 KRTAP13-4Q3LI77 160 aa8.02□□□□□ -1.13
HOXA10-202ENST00000396344 CRCT1Q9UGL9 99 aa7.98□□□□□ -1.13
HOXA10-202ENST00000396344 A0A0D9SG42 100 aa7.97□□□□□ -1.13
HOXA10-202ENST00000396344 R4GN34 69 aa7.94□□□□□ -1.14
HOXA10-202ENST00000396344 KRTAP9-8Q9BYQ0 159 aa7.89□□□□□ -1.15
HOXA10-202ENST00000396344 FSIP2Q5CZC0 6907 aa7.87□□□□□ -1.15
HOXA10-202ENST00000396344 CRIPTQ9P021 101 aa7.84□□□□□ -1.15
HOXA10-202ENST00000396344 ROMO1P60602 79 aa7.84□□□□□ -1.15
HOXA10-202ENST00000396344 KRTAP12-1P59990 96 aa7.81□□□□□ -1.16
HOXA10-202ENST00000396344 SPINT4Q6UDR6 99 aa7.8□□□□□ -1.16
HOXA10-202ENST00000396344 MT2AP02795 61 aa7.78□□□□□ -1.16
HOXA10-202ENST00000396344 KRTAP12-2P59991 146 aa7.77□□□□□ -1.17
HOXA10-202ENST00000396344 PRAC1Q96KF2 57 aa7.77□□□□□ -1.17
HOXA10-202ENST00000396344 MT1FP04733 61 aa7.7□□□□□ -1.18
HOXA10-202ENST00000396344 KRTAP10-10P60014 251 aa7.68□□□□□ -1.18
HOXA10-202ENST00000396344 A0A0A0MQY5 61 aa7.67□□□□□ -1.18
HOXA10-202ENST00000396344 USH2AO75445 5202 aa7.66□□□□□ -1.18
HOXA10-202ENST00000396344 KRTAP9-3Q9BYQ3 159 aa7.66□□□□□ -1.18
HOXA10-202ENST00000396344 KRTAP25-1Q3LHN0 102 aa7.64□□□□□ -1.19
HOXA10-202ENST00000396344 SSPOA2VEC9 5147 aa7.59□□□□□ -1.19
HOXA10-202ENST00000396344 LCE2BO14633 110 aa7.59□□□□□ -1.2
HOXA10-202ENST00000396344 CAMK2N1Q7Z7J9 78 aa7.5□□□□□ -1.21
HOXA10-202ENST00000396344 SPRR2GQ9BYE4 73 aa7.46□□□□□ -1.21
HOXA10-202ENST00000396344 KRTAP19-1Q8IUB9 90 aa7.44□□□□□ -1.22
HOXA10-202ENST00000396344 FCGBPQ9Y6R7 5405 aaPredicted RBP7.42□□□□□ -1.22
HOXA10-202ENST00000396344 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.42□□□□□ -1.22
HOXA10-202ENST00000396344 PLAC4Q8WY50 150 aa7.37□□□□□ -1.23
HOXA10-202ENST00000396344 KRTAP19-6Q3LI70 58 aa7.37□□□□□ -1.23
HOXA10-202ENST00000396344 C10orf95Q9H7T3 257 aa7.33□□□□□ -1.24
HOXA10-202ENST00000396344 KRTAP9-7A8MTY7 169 aa7.32□□□□□ -1.24
HOXA10-202ENST00000396344 PP632Q6XCG6 107 aa7.24□□□□□ -1.25
HOXA10-202ENST00000396344 KRTAP19-8Q3LI54 63 aa7.22□□□□□ -1.25
HOXA10-202ENST00000396344 TNP1P09430 55 aa7.2□□□□□ -1.26
HOXA10-202ENST00000396344 KRTAP23-1A1A580 65 aa7.13□□□□□ -1.27
HOXA10-202ENST00000396344 MT1BP07438 61 aa7.09□□□□□ -1.27
HOXA10-202ENST00000396344 MACF1Q9UPN3 7388 aaKnown RBP7.07□□□□□ -1.28
HOXA10-202ENST00000396344 KRTAP6-3Q3LI67 103 aa6.99□□□□□ -1.29
HOXA10-202ENST00000396344 LUZP6Q538Z0 58 aa6.96□□□□□ -1.29
HOXA10-202ENST00000396344 PRO2289Q9P1D8 64 aa6.96□□□□□ -1.29
HOXA10-202ENST00000396344 KRTAP10-5P60370 271 aa6.95□□□□□ -1.3
HOXA10-202ENST00000396344 SYNE2Q8WXH0 6885 aaKnown RBP6.93□□□□□ -1.3
HOXA10-202ENST00000396344 NDUFAF8A1L188 74 aa6.92□□□□□ -1.3
HOXA10-202ENST00000396344 MT1XP80297 61 aa6.86□□□□□ -1.31
HOXA10-202ENST00000396344 KRTAP15-1Q3LI76 137 aa6.86□□□□□ -1.31
HOXA10-202ENST00000396344 KRTAP10-12P60413 245 aa6.72□□□□□ -1.33
HOXA10-202ENST00000396344 LCE3AQ5TA76 89 aa6.72□□□□□ -1.33
HOXA10-202ENST00000396344 KRTAP5-9P26371 169 aa6.69□□□□□ -1.34
HOXA10-202ENST00000396344 KRTAP8-1Q8IUC2 63 aa6.65□□□□□ -1.34
HOXA10-202ENST00000396344 MUC12Q9UKN1 5478 aa6.61□□□□□ -1.35
HOXA10-202ENST00000396344 NEBP20929 6669 aa6.59□□□□□ -1.35
HOXA10-202ENST00000396344 KMT2DO14686 5537 aa6.58□□□□□ -1.36
HOXA10-202ENST00000396344 KRTAP10-7P60409 375 aaPredicted RBP6.57□□□□□ -1.36
HOXA10-202ENST00000396344 KRTAP12-3P60328 96 aa6.49□□□□□ -1.37
HOXA10-202ENST00000396344 MDN1Q9NU22 5596 aa6.47□□□□□ -1.37
HOXA10-202ENST00000396344 SPRR2FQ96RM1 72 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 185.2 ms