RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 H0YAA0 97 aa7.07□□□□□ -1.28
CDC42SE2-202ENST00000395246 PRR15LQ9BU68 103 aa7.06□□□□□ -1.28
CDC42SE2-202ENST00000395246 KRTAP4-1Q9BYQ7 146 aa7.06□□□□□ -1.28
CDC42SE2-202ENST00000395246 J3QL48 77 aa7.06□□□□□ -1.28
CDC42SE2-202ENST00000395246 CDC42SE1Q9NRR8 79 aa7.03□□□□□ -1.28
CDC42SE2-202ENST00000395246 SPATA8Q6RVD6 105 aa7.03□□□□□ -1.28
CDC42SE2-202ENST00000395246 LCA10Q71F78 164 aa7.03□□□□□ -1.28
CDC42SE2-202ENST00000395246 PSPHP1O15172 72 aa7.02□□□□□ -1.29
CDC42SE2-202ENST00000395246 FLGP20930 4061 aaPredicted RBP7.01□□□□□ -1.29
CDC42SE2-202ENST00000395246 HERC1Q15751 4861 aa7□□□□□ -1.29
CDC42SE2-202ENST00000395246 KRTAP3-2Q9BYR7 98 aa7□□□□□ -1.29
CDC42SE2-202ENST00000395246 A0A1B0GU69 56 aa6.98□□□□□ -1.29
CDC42SE2-202ENST00000395246 S4R3F8 94 aa6.98□□□□□ -1.29
CDC42SE2-202ENST00000395246 KRTAP10-6P60371 365 aaPredicted RBP6.97□□□□□ -1.29
CDC42SE2-202ENST00000395246 RBM12B-AS1Q9P1G2 102 aa6.97□□□□□ -1.29
CDC42SE2-202ENST00000395246 DMBT1Q9UGM3 2413 aaPredicted RBP6.93□□□□□ -1.3
CDC42SE2-202ENST00000395246 UQCR11O14957 56 aa6.88□□□□□ -1.31
CDC42SE2-202ENST00000395246 LCE2CQ5TA81 110 aa6.85□□□□□ -1.31
CDC42SE2-202ENST00000395246 BRK1Q8WUW1 75 aa6.84□□□□□ -1.31
CDC42SE2-202ENST00000395246 A6NED7 52 aa6.82□□□□□ -1.32
CDC42SE2-202ENST00000395246 SEC61GP60059 68 aa6.82□□□□□ -1.32
CDC42SE2-202ENST00000395246 A8MU10 97 aa6.8□□□□□ -1.32
CDC42SE2-202ENST00000395246 A6NN06 94 aa6.79□□□□□ -1.32
CDC42SE2-202ENST00000395246 A0A1B0GU33 70 aa6.78□□□□□ -1.32
CDC42SE2-202ENST00000395246 MIR22HGQ0VDD5 57 aa6.78□□□□□ -1.32
CDC42SE2-202ENST00000395246 CSAG1Q6PB30 78 aa6.78□□□□□ -1.32
CDC42SE2-202ENST00000395246 KRTAP13-4Q3LI77 160 aa6.69□□□□□ -1.34
CDC42SE2-202ENST00000395246 M0QZ58 72 aa6.68□□□□□ -1.34
CDC42SE2-202ENST00000395246 P0C880 135 aa6.67□□□□□ -1.34
CDC42SE2-202ENST00000395246 ADM2Q7Z4H4 148 aa6.63□□□□□ -1.35
CDC42SE2-202ENST00000395246 CRIPTQ9P021 101 aa6.61□□□□□ -1.35
CDC42SE2-202ENST00000395246 RNF213Q63HN8 5207 aa6.6□□□□□ -1.35
CDC42SE2-202ENST00000395246 MUC2Q02817 5179 aa6.57□□□□□ -1.36
CDC42SE2-202ENST00000395246 MT1HP80294 61 aa6.57□□□□□ -1.36
CDC42SE2-202ENST00000395246 PMAIP1Q13794 54 aa6.51□□□□□ -1.37
CDC42SE2-202ENST00000395246 KTN1-AS1Q86SY8 53 aa6.51□□□□□ -1.37
CDC42SE2-202ENST00000395246 KRTAP12-1P59990 96 aa6.48□□□□□ -1.37
CDC42SE2-202ENST00000395246 UBR4Q5T4S7 5183 aa6.48□□□□□ -1.37
CDC42SE2-202ENST00000395246 SPRR2GQ9BYE4 73 aa6.46□□□□□ -1.38
CDC42SE2-202ENST00000395246 LORP23490 312 aaPredicted RBP6.45□□□□□ -1.38
CDC42SE2-202ENST00000395246 KRTAP9-8Q9BYQ0 159 aa6.44□□□□□ -1.38
CDC42SE2-202ENST00000395246 KRTAP12-2P59991 146 aa6.4□□□□□ -1.39
CDC42SE2-202ENST00000395246 LCE2DQ5TA82 110 aaPredicted RBP6.4□□□□□ -1.39
CDC42SE2-202ENST00000395246 FAT4Q6V0I7 4981 aa6.39□□□□□ -1.39
CDC42SE2-202ENST00000395246 LCE2AQ5TA79 106 aaPredicted RBP6.34□□□□□ -1.39
CDC42SE2-202ENST00000395246 MT2AP02795 61 aa6.33□□□□□ -1.4
CDC42SE2-202ENST00000395246 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
CDC42SE2-202ENST00000395246 K7ERS5 55 aa6.31□□□□□ -1.4
CDC42SE2-202ENST00000395246 R4GN34 69 aa6.31□□□□□ -1.4
CDC42SE2-202ENST00000395246 KRTAP19-8Q3LI54 63 aa6.3□□□□□ -1.4
CDC42SE2-202ENST00000395246 MT1FP04733 61 aa6.27□□□□□ -1.41
CDC42SE2-202ENST00000395246 ROMO1P60602 79 aa6.27□□□□□ -1.41
CDC42SE2-202ENST00000395246 KRTAP9-3Q9BYQ3 159 aa6.21□□□□□ -1.42
CDC42SE2-202ENST00000395246 A0A0D9SG42 100 aa6.17□□□□□ -1.42
CDC42SE2-202ENST00000395246 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
CDC42SE2-202ENST00000395246 KRTAP25-1Q3LHN0 102 aa6.12□□□□□ -1.43
CDC42SE2-202ENST00000395246 C10orf95Q9H7T3 257 aa6.11□□□□□ -1.43
CDC42SE2-202ENST00000395246 MT1BP07438 61 aa6.08□□□□□ -1.44
CDC42SE2-202ENST00000395246 SPINT4Q6UDR6 99 aa6.04□□□□□ -1.44
CDC42SE2-202ENST00000395246 PRAC1Q96KF2 57 aa6.02□□□□□ -1.45
CDC42SE2-202ENST00000395246 M0R2T5 61 aa6□□□□□ -1.45
CDC42SE2-202ENST00000395246 KRTAP10-10P60014 251 aa6□□□□□ -1.45
CDC42SE2-202ENST00000395246 KRTAP10-5P60370 271 aa5.92□□□□□ -1.46
CDC42SE2-202ENST00000395246 LINC01554Q52M75 96 aa5.92□□□□□ -1.46
CDC42SE2-202ENST00000395246 MT1XP80297 61 aa5.91□□□□□ -1.46
CDC42SE2-202ENST00000395246 LCE2BO14633 110 aa5.9□□□□□ -1.46
CDC42SE2-202ENST00000395246 PP632Q6XCG6 107 aa5.9□□□□□ -1.46
CDC42SE2-202ENST00000395246 PLAC4Q8WY50 150 aa5.88□□□□□ -1.47
CDC42SE2-202ENST00000395246 CAMK2N1Q7Z7J9 78 aa5.8□□□□□ -1.48
CDC42SE2-202ENST00000395246 TNP1P09430 55 aa5.76□□□□□ -1.49
CDC42SE2-202ENST00000395246 KRTAP10-12P60413 245 aa5.73□□□□□ -1.49
CDC42SE2-202ENST00000395246 KRTAP8-1Q8IUC2 63 aa5.67□□□□□ -1.5
CDC42SE2-202ENST00000395246 PRO2289Q9P1D8 64 aa5.66□□□□□ -1.5
CDC42SE2-202ENST00000395246 KRTAP19-6Q3LI70 58 aa5.66□□□□□ -1.5
CDC42SE2-202ENST00000395246 USH2AO75445 5202 aa5.61□□□□□ -1.51
CDC42SE2-202ENST00000395246 SSPOA2VEC9 5147 aa5.61□□□□□ -1.51
CDC42SE2-202ENST00000395246 KRTAP15-1Q3LI76 137 aa5.58□□□□□ -1.52
CDC42SE2-202ENST00000395246 KRTAP10-7P60409 375 aaPredicted RBP5.55□□□□□ -1.52
CDC42SE2-202ENST00000395246 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
CDC42SE2-202ENST00000395246 LCE3AQ5TA76 89 aa5.53□□□□□ -1.52
CDC42SE2-202ENST00000395246 KRTAP19-4Q3LI73 84 aa5.46□□□□□ -1.54
CDC42SE2-202ENST00000395246 KRTAP12-3P60328 96 aa5.32□□□□□ -1.56
CDC42SE2-202ENST00000395246 KRTAP19-7Q3SYF9 63 aa5.3□□□□□ -1.56
CDC42SE2-202ENST00000395246 KRTAP19-5Q3LI72 72 aa5.24□□□□□ -1.57
CDC42SE2-202ENST00000395246 KRTAP4-8A0A0G2JLE6 195 aa5.18□□□□□ -1.58
CDC42SE2-202ENST00000395246 KRTAP4-8Q9BYQ9 185 aa5.18□□□□□ -1.58
CDC42SE2-202ENST00000395246 MT1EP04732 61 aa5.17□□□□□ -1.58
CDC42SE2-202ENST00000395246 KRTAP9-2Q9BYQ4 174 aa5.11□□□□□ -1.59
CDC42SE2-202ENST00000395246 FCGBPQ9Y6R7 5405 aaPredicted RBP5.09□□□□□ -1.59
CDC42SE2-202ENST00000395246 LCE3CQ5T5A8 94 aa5.08□□□□□ -1.6
CDC42SE2-202ENST00000395246 MT1LQ93083 61 aa5.08□□□□□ -1.6
CDC42SE2-202ENST00000395246 KRTAP5-9P26371 169 aa5.03□□□□□ -1.6
CDC42SE2-202ENST00000395246 KMT2DO14686 5537 aa4.98□□□□□ -1.61
CDC42SE2-202ENST00000395246 CRCT1Q9UGL9 99 aa4.96□□□□□ -1.61
CDC42SE2-202ENST00000395246 KRTAP19-3Q7Z4W3 81 aa4.91□□□□□ -1.62
CDC42SE2-202ENST00000395246 LCE5AQ5TCM9 118 aa4.9□□□□□ -1.62
CDC42SE2-202ENST00000395246 MT1GP13640 62 aa4.9□□□□□ -1.63
CDC42SE2-202ENST00000395246 NDUFAF8A1L188 74 aa4.83□□□□□ -1.64
CDC42SE2-202ENST00000395246 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
CDC42SE2-202ENST00000395246 MT1MQ8N339 61 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms