RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 KIAA1109Q2LD37 5005 aa3.44□□□□□ -1.86
NXF3-201ENST00000395065 KRTAP1-4P0C5Y4 121 aa3.44□□□□□ -1.86
NXF3-201ENST00000395065 P0C880 135 aa3.43□□□□□ -1.86
NXF3-201ENST00000395065 HERC2O95714 4834 aa3.43□□□□□ -1.86
NXF3-201ENST00000395065 KRTAP3-1Q9BYR8 98 aa3.42□□□□□ -1.86
NXF3-201ENST00000395065 KRTAP10-1P60331 282 aa3.42□□□□□ -1.86
NXF3-201ENST00000395065 APOBP04114 4563 aaKnown RBP3.41□□□□□ -1.86
NXF3-201ENST00000395065 LOC100996750A0A140TA64 210 aa3.4□□□□□ -1.87
NXF3-201ENST00000395065 KRTAP4-6Q9BYQ5 205 aa3.4□□□□□ -1.87
NXF3-201ENST00000395065 ABCA13Q86UQ4 5058 aa3.39□□□□□ -1.87
NXF3-201ENST00000395065 FLG2Q5D862 2391 aaPredicted RBP3.39□□□□□ -1.87
NXF3-201ENST00000395065 K7ERS5 55 aa3.39□□□□□ -1.87
NXF3-201ENST00000395065 FAT1Q14517 4588 aa3.39□□□□□ -1.87
NXF3-201ENST00000395065 RPS29P62273 56 aaKnown RBP3.38□□□□□ -1.87
NXF3-201ENST00000395065 XP32Q5T750 250 aa3.38□□□□□ -1.87
NXF3-201ENST00000395065 COX6B2Q6YFQ2 88 aa3.38□□□□□ -1.87
NXF3-201ENST00000395065 C20orf166-AS1Q96NR2 134 aa3.37□□□□□ -1.87
NXF3-201ENST00000395065 CRIPTQ9P021 101 aa3.36□□□□□ -1.87
NXF3-201ENST00000395065 PKHD1L1Q86WI1 4243 aa3.34□□□□□ -1.87
NXF3-201ENST00000395065 HSPG2P98160 4391 aa3.34□□□□□ -1.88
NXF3-201ENST00000395065 RPL37P61927 97 aaKnown RBP3.33□□□□□ -1.88
NXF3-201ENST00000395065 HERC1Q15751 4861 aa3.33□□□□□ -1.88
NXF3-201ENST00000395065 TPRXLQ17RH7 258 aa3.32□□□□□ -1.88
NXF3-201ENST00000395065 KRTAP10-6P60371 365 aaPredicted RBP3.31□□□□□ -1.88
NXF3-201ENST00000395065 KRTAP15-1Q3LI76 137 aa3.31□□□□□ -1.88
NXF3-201ENST00000395065 KRTAP4-5Q9BYR2 181 aa3.31□□□□□ -1.88
NXF3-201ENST00000395065 SMR3BP02814 79 aaPredicted RBP3.29□□□□□ -1.88
NXF3-201ENST00000395065 KRTAP13-4Q3LI77 160 aa3.29□□□□□ -1.88
NXF3-201ENST00000395065 SPINT4Q6UDR6 99 aa3.29□□□□□ -1.88
NXF3-201ENST00000395065 A0A1B0GVY2 172 aa3.27□□□□□ -1.89
NXF3-201ENST00000395065 C9orf92A6NGG3 77 aa3.27□□□□□ -1.89
NXF3-201ENST00000395065 LRP1Q07954 4544 aaKnown RBP3.26□□□□□ -1.89
NXF3-201ENST00000395065 MYCBP2O75592 4640 aa3.25□□□□□ -1.89
NXF3-201ENST00000395065 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
NXF3-201ENST00000395065 TNXBP22105 4242 aa3.24□□□□□ -1.89
NXF3-201ENST00000395065 C10orf95Q9H7T3 257 aa3.24□□□□□ -1.89
NXF3-201ENST00000395065 FAT3Q8TDW7 4589 aa3.23□□□□□ -1.89
NXF3-201ENST00000395065 KRTAP10-4P60372 401 aaPredicted RBP3.23□□□□□ -1.89
NXF3-201ENST00000395065 A0A0D9SG42 100 aa3.21□□□□□ -1.9
NXF3-201ENST00000395065 S4R3F8 94 aa3.21□□□□□ -1.9
NXF3-201ENST00000395065 UBR4Q5T4S7 5183 aa3.2□□□□□ -1.9
NXF3-201ENST00000395065 KRTAP12-2P59991 146 aa3.19□□□□□ -1.9
NXF3-201ENST00000395065 DMBT1Q9UGM3 2413 aaPredicted RBP3.19□□□□□ -1.9
NXF3-201ENST00000395065 KRTAP4-8Q9BYQ9 185 aa3.18□□□□□ -1.9
NXF3-201ENST00000395065 KRTAP12-1P59990 96 aa3.17□□□□□ -1.9
NXF3-201ENST00000395065 KRTAP19-4Q3LI73 84 aa3.16□□□□□ -1.9
NXF3-201ENST00000395065 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.15□□□□□ -1.91
NXF3-201ENST00000395065 KRTAP9-2Q9BYQ4 174 aa3.14□□□□□ -1.91
NXF3-201ENST00000395065 KRTAP9-6A0A140TA67 174 aa3.13□□□□□ -1.91
NXF3-201ENST00000395065 KRTAP10-8P60410 259 aa3.13□□□□□ -1.91
NXF3-201ENST00000395065 RNF213Q63HN8 5207 aa3.13□□□□□ -1.91
NXF3-201ENST00000395065 Q5VSD8 79 aa3.11□□□□□ -1.91
NXF3-201ENST00000395065 M0QZ58 72 aa3.11□□□□□ -1.91
NXF3-201ENST00000395065 KRTAP19-1Q8IUB9 90 aa3.11□□□□□ -1.91
NXF3-201ENST00000395065 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
NXF3-201ENST00000395065 LPAP08519 4548 aa3.08□□□□□ -1.92
NXF3-201ENST00000395065 HMCN2Q8NDA2 5059 aa3.08□□□□□ -1.92
NXF3-201ENST00000395065 LCE3BQ5TA77 95 aa3.06□□□□□ -1.92
NXF3-201ENST00000395065 PLAC4Q8WY50 150 aa3.03□□□□□ -1.92
NXF3-201ENST00000395065 LRP2P98164 4655 aa3.02□□□□□ -1.93
NXF3-201ENST00000395065 MT1HL1P0DM35 61 aa3.01□□□□□ -1.93
NXF3-201ENST00000395065 LUZP6Q538Z0 58 aa3□□□□□ -1.93
NXF3-201ENST00000395065 MUC2Q02817 5179 aa3□□□□□ -1.93
NXF3-201ENST00000395065 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
NXF3-201ENST00000395065 KRTAP9-4Q9BYQ2 154 aa2.99□□□□□ -1.93
NXF3-201ENST00000395065 LCE4AQ5TA78 99 aa2.97□□□□□ -1.93
NXF3-201ENST00000395065 PP632Q6XCG6 107 aa2.94□□□□□ -1.94
NXF3-201ENST00000395065 R4GN34 69 aa2.94□□□□□ -1.94
NXF3-201ENST00000395065 MUC17Q685J3 4493 aa2.93□□□□□ -1.94
NXF3-201ENST00000395065 KRTAP4-8A0A0G2JLE6 195 aa2.89□□□□□ -1.95
NXF3-201ENST00000395065 KRTAP9-7A8MTY7 169 aa2.89□□□□□ -1.95
NXF3-201ENST00000395065 CAMK2N1Q7Z7J9 78 aa2.87□□□□□ -1.95
NXF3-201ENST00000395065 SPRR5A0A1B0GTR4 108 aa2.86□□□□□ -1.95
NXF3-201ENST00000395065 FSIP2Q5CZC0 6907 aa2.85□□□□□ -1.95
NXF3-201ENST00000395065 LCE1DQ5T752 114 aa2.83□□□□□ -1.96
NXF3-201ENST00000395065 KRTAP4-1Q9BYQ7 146 aa2.81□□□□□ -1.96
NXF3-201ENST00000395065 FAT4Q6V0I7 4981 aa2.81□□□□□ -1.96
NXF3-201ENST00000395065 KRTAP4-7Q9BYR0 210 aa2.78□□□□□ -1.97
NXF3-201ENST00000395065 KRTAP19-2Q3LHN2 52 aa2.76□□□□□ -1.97
NXF3-201ENST00000395065 FLGP20930 4061 aaPredicted RBP2.76□□□□□ -1.97
NXF3-201ENST00000395065 TNP1P09430 55 aa2.76□□□□□ -1.97
NXF3-201ENST00000395065 KRTAP9-3Q9BYQ3 159 aa2.75□□□□□ -1.97
NXF3-201ENST00000395065 KRTAP4-9Q9BYQ8 210 aa2.74□□□□□ -1.97
NXF3-201ENST00000395065 PRO2289Q9P1D8 64 aa2.72□□□□□ -1.97
NXF3-201ENST00000395065 LCE5AQ5TCM9 118 aa2.71□□□□□ -1.98
NXF3-201ENST00000395065 KRTAP4-2Q9BYR5 136 aa2.68□□□□□ -1.98
NXF3-201ENST00000395065 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
NXF3-201ENST00000395065 INE1O15225 51 aa2.66□□□□□ -1.98
NXF3-201ENST00000395065 SPRR2GQ9BYE4 73 aa2.59□□□□□ -1.99
NXF3-201ENST00000395065 LCE3AQ5TA76 89 aa2.58□□□□□ -2
NXF3-201ENST00000395065 CRCT1Q9UGL9 99 aa2.58□□□□□ -2
NXF3-201ENST00000395065 KRTAP8-1Q8IUC2 63 aa2.56□□□□□ -2
NXF3-201ENST00000395065 USH2AO75445 5202 aa2.55□□□□□ -2
NXF3-201ENST00000395065 M0R2T5 61 aa2.53□□□□□ -2
NXF3-201ENST00000395065 MT1HP80294 61 aa2.52□□□□□ -2.01
NXF3-201ENST00000395065 SYNE2Q8WXH0 6885 aaKnown RBP2.5□□□□□ -2.01
NXF3-201ENST00000395065 KRTAP10-12P60413 245 aa2.48□□□□□ -2.01
NXF3-201ENST00000395065 MT1FP04733 61 aa2.48□□□□□ -2.01
NXF3-201ENST00000395065 MT2AP02795 61 aa2.47□□□□□ -2.01
NXF3-201ENST00000395065 KRTAP10-10P60014 251 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms