RNA–Protein interactions for RNA: ENST00000394744.6

RAB11FIP4-201, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2 BASIC

Gene RAB11FIP4, Length 1,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-201ENST00000394744 SPTSSBQ8NFR3 76 aa10.29□□□□□ -0.76
RAB11FIP4-201ENST00000394744 CDC42SE1Q9NRR8 79 aa10.28□□□□□ -0.76
RAB11FIP4-201ENST00000394744 HERC1Q15751 4861 aa10.28□□□□□ -0.76
RAB11FIP4-201ENST00000394744 LRP2P98164 4655 aa10.18□□□□□ -0.78
RAB11FIP4-201ENST00000394744 LPAP08519 4548 aa10.17□□□□□ -0.78
RAB11FIP4-201ENST00000394744 SEC61GP60059 68 aa10.15□□□□□ -0.78
RAB11FIP4-201ENST00000394744 UQCR11O14957 56 aa10.12□□□□□ -0.79
RAB11FIP4-201ENST00000394744 SPATA8Q6RVD6 105 aa10.08□□□□□ -0.8
RAB11FIP4-201ENST00000394744 HMCN2Q8NDA2 5059 aa10.08□□□□□ -0.8
RAB11FIP4-201ENST00000394744 MIR22HGQ0VDD5 57 aa10.06□□□□□ -0.8
RAB11FIP4-201ENST00000394744 PMAIP1Q13794 54 aa10.06□□□□□ -0.8
RAB11FIP4-201ENST00000394744 KRTAP3-3Q9BYR6 98 aa10.05□□□□□ -0.8
RAB11FIP4-201ENST00000394744 S4R3F8 94 aa10.02□□□□□ -0.81
RAB11FIP4-201ENST00000394744 H1FX-AS1Q4G0G2 97 aa9.98□□□□□ -0.81
RAB11FIP4-201ENST00000394744 A6NN06 94 aa9.95□□□□□ -0.82
RAB11FIP4-201ENST00000394744 RBM12B-AS1Q9P1G2 102 aa9.94□□□□□ -0.82
RAB11FIP4-201ENST00000394744 A0A1B0GU33 70 aa9.93□□□□□ -0.82
RAB11FIP4-201ENST00000394744 SEC61BP60468 96 aaKnown RBP9.92□□□□□ -0.82
RAB11FIP4-201ENST00000394744 H0YAA0 97 aa9.88□□□□□ -0.83
RAB11FIP4-201ENST00000394744 KRTAP10-6P60371 365 aaPredicted RBP9.82□□□□□ -0.84
RAB11FIP4-201ENST00000394744 KRTAP4-1Q9BYQ7 146 aa9.8□□□□□ -0.84
RAB11FIP4-201ENST00000394744 KRTAP3-2Q9BYR7 98 aa9.8□□□□□ -0.84
RAB11FIP4-201ENST00000394744 MUC17Q685J3 4493 aa9.79□□□□□ -0.84
RAB11FIP4-201ENST00000394744 KTN1-AS1Q86SY8 53 aa9.75□□□□□ -0.85
RAB11FIP4-201ENST00000394744 UBR4Q5T4S7 5183 aa9.74□□□□□ -0.85
RAB11FIP4-201ENST00000394744 CSAG1Q6PB30 78 aa9.73□□□□□ -0.85
RAB11FIP4-201ENST00000394744 P0C880 135 aa9.7□□□□□ -0.86
RAB11FIP4-201ENST00000394744 ADM2Q7Z4H4 148 aa9.66□□□□□ -0.86
RAB11FIP4-201ENST00000394744 MUC2Q02817 5179 aa9.65□□□□□ -0.86
RAB11FIP4-201ENST00000394744 KRTAP13-4Q3LI77 160 aa9.65□□□□□ -0.86
RAB11FIP4-201ENST00000394744 KRTAP19-2Q3LHN2 52 aa9.57□□□□□ -0.88
RAB11FIP4-201ENST00000394744 RNF213Q63HN8 5207 aa9.54□□□□□ -0.88
RAB11FIP4-201ENST00000394744 A0A0D9SG42 100 aa9.52□□□□□ -0.89
RAB11FIP4-201ENST00000394744 K7ERS5 55 aa9.47□□□□□ -0.89
RAB11FIP4-201ENST00000394744 PRAC1Q96KF2 57 aa9.45□□□□□ -0.9
RAB11FIP4-201ENST00000394744 M0QZ58 72 aa9.39□□□□□ -0.91
RAB11FIP4-201ENST00000394744 KRTAP12-2P59991 146 aa9.3□□□□□ -0.92
RAB11FIP4-201ENST00000394744 FLGP20930 4061 aaPredicted RBP9.29□□□□□ -0.92
RAB11FIP4-201ENST00000394744 LORP23490 312 aaPredicted RBP9.26□□□□□ -0.93
RAB11FIP4-201ENST00000394744 KRTAP12-1P59990 96 aa9.26□□□□□ -0.93
RAB11FIP4-201ENST00000394744 R4GN34 69 aa9.26□□□□□ -0.93
RAB11FIP4-201ENST00000394744 FAT4Q6V0I7 4981 aa9.25□□□□□ -0.93
RAB11FIP4-201ENST00000394744 SPINT4Q6UDR6 99 aa9.24□□□□□ -0.93
RAB11FIP4-201ENST00000394744 LCE2CQ5TA81 110 aa9.21□□□□□ -0.94
RAB11FIP4-201ENST00000394744 ROMO1P60602 79 aa9.19□□□□□ -0.94
RAB11FIP4-201ENST00000394744 LINC01554Q52M75 96 aa9.19□□□□□ -0.94
RAB11FIP4-201ENST00000394744 CRIPTQ9P021 101 aa9.07□□□□□ -0.96
RAB11FIP4-201ENST00000394744 KRTAP25-1Q3LHN0 102 aa9.06□□□□□ -0.96
RAB11FIP4-201ENST00000394744 MT1HP80294 61 aa9.02□□□□□ -0.97
RAB11FIP4-201ENST00000394744 M0R2T5 61 aa8.92□□□□□ -0.98
RAB11FIP4-201ENST00000394744 LCE2AQ5TA79 106 aaPredicted RBP8.84□□□□□ -0.99
RAB11FIP4-201ENST00000394744 C10orf95Q9H7T3 257 aa8.84□□□□□ -0.99
RAB11FIP4-201ENST00000394744 CAMK2N1Q7Z7J9 78 aa8.73□□□□□ -1.01
RAB11FIP4-201ENST00000394744 MT2AP02795 61 aa8.71□□□□□ -1.02
RAB11FIP4-201ENST00000394744 SPRR2GQ9BYE4 73 aa8.7□□□□□ -1.02
RAB11FIP4-201ENST00000394744 MT1FP04733 61 aa8.69□□□□□ -1.02
RAB11FIP4-201ENST00000394744 KRTAP19-1Q8IUB9 90 aa8.68□□□□□ -1.02
RAB11FIP4-201ENST00000394744 KRTAP9-8Q9BYQ0 159 aa8.68□□□□□ -1.02
RAB11FIP4-201ENST00000394744 KRTAP10-10P60014 251 aa8.66□□□□□ -1.02
RAB11FIP4-201ENST00000394744 PLAC4Q8WY50 150 aa8.52□□□□□ -1.05
RAB11FIP4-201ENST00000394744 KRTAP19-8Q3LI54 63 aa8.41□□□□□ -1.06
RAB11FIP4-201ENST00000394744 TNP1P09430 55 aa8.35□□□□□ -1.07
RAB11FIP4-201ENST00000394744 KRTAP9-3Q9BYQ3 159 aa8.35□□□□□ -1.07
RAB11FIP4-201ENST00000394744 MT1BP07438 61 aa8.31□□□□□ -1.08
RAB11FIP4-201ENST00000394744 PP632Q6XCG6 107 aa8.3□□□□□ -1.08
RAB11FIP4-201ENST00000394744 LCE2BO14633 110 aa8.19□□□□□ -1.1
RAB11FIP4-201ENST00000394744 KRTAP23-1A1A580 65 aa8.15□□□□□ -1.11
RAB11FIP4-201ENST00000394744 KRTAP15-1Q3LI76 137 aa8.14□□□□□ -1.11
RAB11FIP4-201ENST00000394744 MT1XP80297 61 aa8.13□□□□□ -1.11
RAB11FIP4-201ENST00000394744 KRTAP10-5P60370 271 aa8.13□□□□□ -1.11
RAB11FIP4-201ENST00000394744 USH2AO75445 5202 aa8.08□□□□□ -1.12
RAB11FIP4-201ENST00000394744 LCE2DQ5TA82 110 aaPredicted RBP8.05□□□□□ -1.12
RAB11FIP4-201ENST00000394744 LCE3AQ5TA76 89 aa7.99□□□□□ -1.13
RAB11FIP4-201ENST00000394744 FSIP2Q5CZC0 6907 aa7.97□□□□□ -1.13
RAB11FIP4-201ENST00000394744 KRTAP9-2Q9BYQ4 174 aa7.92□□□□□ -1.14
RAB11FIP4-201ENST00000394744 PRO2289Q9P1D8 64 aa7.91□□□□□ -1.14
RAB11FIP4-201ENST00000394744 SSPOA2VEC9 5147 aa7.87□□□□□ -1.15
RAB11FIP4-201ENST00000394744 KRTAP10-7P60409 375 aaPredicted RBP7.86□□□□□ -1.15
RAB11FIP4-201ENST00000394744 KRTAP10-12P60413 245 aa7.84□□□□□ -1.15
RAB11FIP4-201ENST00000394744 KRTAP8-1Q8IUC2 63 aa7.79□□□□□ -1.16
RAB11FIP4-201ENST00000394744 NDUFAF8A1L188 74 aa7.73□□□□□ -1.17
RAB11FIP4-201ENST00000394744 KRTAP19-6Q3LI70 58 aa7.68□□□□□ -1.18
RAB11FIP4-201ENST00000394744 KRTAP12-3P60328 96 aa7.62□□□□□ -1.19
RAB11FIP4-201ENST00000394744 CRCT1Q9UGL9 99 aa7.58□□□□□ -1.2
RAB11FIP4-201ENST00000394744 SPRR5A0A1B0GTR4 108 aa7.57□□□□□ -1.2
RAB11FIP4-201ENST00000394744 FCGBPQ9Y6R7 5405 aaPredicted RBP7.56□□□□□ -1.2
RAB11FIP4-201ENST00000394744 LUZP6Q538Z0 58 aa7.51□□□□□ -1.21
RAB11FIP4-201ENST00000394744 H3BS24 57 aa7.48□□□□□ -1.21
RAB11FIP4-201ENST00000394744 KRTAP4-8A0A0G2JLE6 195 aa7.48□□□□□ -1.21
RAB11FIP4-201ENST00000394744 KRTAP4-8Q9BYQ9 185 aa7.48□□□□□ -1.21
RAB11FIP4-201ENST00000394744 KRTAP19-5Q3LI72 72 aa7.46□□□□□ -1.21
RAB11FIP4-201ENST00000394744 KMT2DO14686 5537 aa7.44□□□□□ -1.22
RAB11FIP4-201ENST00000394744 KRTAP9-6A0A140TA67 174 aa7.37□□□□□ -1.23
RAB11FIP4-201ENST00000394744 MACF1Q9UPN3 7388 aaKnown RBP7.25□□□□□ -1.25
RAB11FIP4-201ENST00000394744 KRTAP19-7Q3SYF9 63 aa7.25□□□□□ -1.25
RAB11FIP4-201ENST00000394744 LCE3CQ5T5A8 94 aa7.15□□□□□ -1.27
RAB11FIP4-201ENST00000394744 MT1EP04732 61 aa7.09□□□□□ -1.27
RAB11FIP4-201ENST00000394744 SYNE2Q8WXH0 6885 aaKnown RBP7.08□□□□□ -1.28
RAB11FIP4-201ENST00000394744 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.04□□□□□ -1.28
RAB11FIP4-201ENST00000394744 MT1LQ93083 61 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms